| Definition | Burkholderia pseudomallei MSHR346 chromosome I, complete genome. |
|---|---|
| Accession | NC_012695 |
| Length | 4,098,576 |
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The map label for this gene is 237813713
Identifier: 237813713
GI number: 237813713
Start: 3378762
End: 3379559
Strand: Direct
Name: 237813713
Synonym: GBP346_A3490
Alternate gene names: NA
Gene position: 3378762-3379559 (Clockwise)
Preceding gene: 237813712
Following gene: 237813714
Centisome position: 82.44
GC content: 77.94
Gene sequence:
>798_bases ATGCGCGCTGAACTCGCCGCGCGCGCCGGCGCCGCCCGCTTCGCCCTCTATTACGCGCCGCCGCGCGCATCCGCGTGGTG GCGCGCCGGCTGCGCGTGGCTCGGCCGCGATCCGGAAGACGGCGCGACGCTCGCGCCGCCGCAGCCGGGCGCGCTGCGCC GGCCGGTGGACGCGCTGACGGTCGCGCCGCGCCGCTACGGCTGGCACGCGACGCTCGTCGCGCCGTTCGCGCTGCGCCCG GGCGTCGCACCGGACGAGCTCGTCGCGGCGGCCGCGGCGTGGGCGCGCGCGTGCGCGCCGCTGGCGATCGACGTCGACGT CGCCGCACTCGGCGCGTTCGTCGCGCTGCGGCCCGCGCACGCGCACGGCGACGACGCATTGCGCGCGCTCGCCGCCCGCG CGCTACGCGCGCTCGCGCCGCTGCGCCGCCCGCCCGCCGATGCCGAGCGCGCCAAGCGCGCCGCCGCGCCGCTCAGCGAG CGCCAGCGCGCCCTGCTCGCCGAATGGGGTTATCCGTACGTGCTCGACGAATACCGGTTTCACATGACGCTGTCCGATCC GCTCGACGATCCCGCCGAACGCGCCGCGCTGATCGACTGGTGGAAAGCCGCGGCGGCGGCGCTCGGGCCGCTGCCCGTCG ATCACGCGGCGATTTTCGTCGAGGCGCGACCGGGCGCGCCGTTCATGCTGTGGAAGCGGCTGCCGTTCGGCCAACGCGCC GCCGCGACCGATGCCGCCGCGACAACCGACGCGGCCGATGCAGCCGACGCGGCCGAGTCCGGCGAGGCGCGACGATGA
Upstream 100 bases:
>100_bases GTCGACGTCGATGTCGACGGCACGCCGATCAAGTACGGCACGACCTATTTCGCGGCCGACCGCGTGCAACTGCTGATCGA GAACGACAACGTGCCCGGCC
Downstream 100 bases:
>100_bases GCGCCGAGCGTCTCGTCTACGTGATGGGCCCGTCGGGCGCCGGCAAGGATTCGCTGCTCGCGTATGCGCGCAAGCACGTG CGCGAACCGCGCATCGCGTT
Product: putative phosphonate metabolism protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 265; Mature: 265
Protein sequence:
>265_residues MRAELAARAGAARFALYYAPPRASAWWRAGCAWLGRDPEDGATLAPPQPGALRRPVDALTVAPRRYGWHATLVAPFALRP GVAPDELVAAAAAWARACAPLAIDVDVAALGAFVALRPAHAHGDDALRALAARALRALAPLRRPPADAERAKRAAAPLSE RQRALLAEWGYPYVLDEYRFHMTLSDPLDDPAERAALIDWWKAAAAALGPLPVDHAAIFVEARPGAPFMLWKRLPFGQRA AATDAAATTDAADAADAAESGEARR
Sequences:
>Translated_265_residues MRAELAARAGAARFALYYAPPRASAWWRAGCAWLGRDPEDGATLAPPQPGALRRPVDALTVAPRRYGWHATLVAPFALRP GVAPDELVAAAAAWARACAPLAIDVDVAALGAFVALRPAHAHGDDALRALAARALRALAPLRRPPADAERAKRAAAPLSE RQRALLAEWGYPYVLDEYRFHMTLSDPLDDPAERAALIDWWKAAAAALGPLPVDHAAIFVEARPGAPFMLWKRLPFGQRA AATDAAATTDAADAADAAESGEARR >Mature_265_residues MRAELAARAGAARFALYYAPPRASAWWRAGCAWLGRDPEDGATLAPPQPGALRRPVDALTVAPRRYGWHATLVAPFALRP GVAPDELVAAAAAWARACAPLAIDVDVAALGAFVALRPAHAHGDDALRALAARALRALAPLRRPPADAERAKRAAAPLSE RQRALLAEWGYPYVLDEYRFHMTLSDPLDDPAERAALIDWWKAAAAALGPLPVDHAAIFVEARPGAPFMLWKRLPFGQRA AATDAAATTDAADAADAAESGEARR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28177; Mature: 28177
Theoretical pI: Translated: 8.70; Mature: 8.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRAELAARAGAARFALYYAPPRASAWWRAGCAWLGRDPEDGATLAPPQPGALRRPVDALT CCCCHHHHCCCEEEEEEECCCCCCHHHHHCHHHCCCCCCCCCCCCCCCCCCCCCCCHHHE VAPRRYGWHATLVAPFALRPGVAPDELVAAAAAWARACAPLAIDVDVAALGAFVALRPAH ECCHHCCCEEEEEEHHHHCCCCCHHHHHHHHHHHHHHHCCEEEEHHHHHHHHHHHCCCCC AHGDDALRALAARALRALAPLRRPPADAERAKRAAAPLSERQRALLAEWGYPYVLDEYRF CCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCHHHHHHHHHHHCCCCEEEECEEE HMTLSDPLDDPAERAALIDWWKAAAAALGPLPVDHAAIFVEARPGAPFMLWKRLPFGQRA EEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCHHEECCCCCCCH AATDAAATTDAADAADAAESGEARR HCCCHHHCCCCHHHHHHHCCCCCCC >Mature Secondary Structure MRAELAARAGAARFALYYAPPRASAWWRAGCAWLGRDPEDGATLAPPQPGALRRPVDALT CCCCHHHHCCCEEEEEEECCCCCCHHHHHCHHHCCCCCCCCCCCCCCCCCCCCCCCHHHE VAPRRYGWHATLVAPFALRPGVAPDELVAAAAAWARACAPLAIDVDVAALGAFVALRPAH ECCHHCCCEEEEEEHHHHCCCCCHHHHHHHHHHHHHHHCCEEEEHHHHHHHHHHHCCCCC AHGDDALRALAARALRALAPLRRPPADAERAKRAAAPLSERQRALLAEWGYPYVLDEYRF CCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCHHHHHHHHHHHCCCCEEEECEEE HMTLSDPLDDPAERAALIDWWKAAAAALGPLPVDHAAIFVEARPGAPFMLWKRLPFGQRA EEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCHHEECCCCCCCH AATDAAATTDAADAADAAESGEARR HCCCHHHCCCCHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA