| Definition | Burkholderia pseudomallei MSHR346 chromosome I, complete genome. |
|---|---|
| Accession | NC_012695 |
| Length | 4,098,576 |
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The map label for this gene is pabB [H]
Identifier: 237813676
GI number: 237813676
Start: 3334830
End: 3336836
Strand: Reverse
Name: pabB [H]
Synonym: GBP346_A3453
Alternate gene names: 237813676
Gene position: 3336836-3334830 (Counterclockwise)
Preceding gene: 237813677
Following gene: 237813669
Centisome position: 81.41
GC content: 72.4
Gene sequence:
>2007_bases ATGACTGACGAAGCGGGCGCGGTTTTCGCGCTCTTCGACGATTGCGACTCGACCGCGGCGGCGCGCTCGAGTCGCTTGTA TTCGGGCTTCTCGCACGAGCGGGCCTGCGCCGATCCGGCCGGCCTCGACGCGGTGTGCGCGGCCGTCGCCGACGACGCGC GGCGCGGGCTGCACGCCGTCGTGCTCGGCGACTACGAGTTCGGGCGCGACCTGCAGCTCGGCAAGCGCGGCGGCGGCGCG TTGCGGTTCCTGCTGTTCGCCGAATGCAGGATGCTCTCGCGCGAGGAGGCCGACGCGTGGCTCGCGTCGCGCGACGGCGG CTCGGCCGAGCCGTCGGCGGCGGGCGTCGCGCACGTGACGAAGAGCGTCGCGCGCGACGCGTTCGACGCGGCGATCGCCG CCGTGCACGATGCGCTGCGCGCGGGCGATTCGTATCAGATCAACTACACGTACCGGCTGCATTTCGATGCGTTCGGCGCG CCGCTCGCGCTGTATCGCCGCCTGCGGGCGCGCCAGCCGGTGCGCTACGGCGCGCTCGTCGCGCTGCCGGGCGGCGCGTG GATCGTATCGTGCTCGCCCGAGCTGTTCGTCGAGAAGACGGGCGCGTTGCTGCGCGCGCGGCCGATGAAAGGCACCGCGC CTCGCTCGGACGATCCGCGCGAGGATGCGGCCGCCGCGCGCTTTCTCGCGAACGATGCGAAGAATCGCGCCGAGAACGTG ATGATCGTCGATCTGCTGCGCAACGATCTCGCGCGCATCGCGCGCACCGGATCGGTGACGGTGCCGGCGTTGTTCTCGGT CGAGCCGTATGCGTCGGTGTGGCAGATGACGTCGACGGTCGAGGCGGGCATCGTCGAAGGCGCGACGTTCGCCGACGTGC TGCGCGCGCTCTTTCCGTGCGGCTCGATCACGGGCGCGCCGAAGCACAGGACGATGCAACTGATCGATGCGCTCGAGACG ACGCCGCGCGGGCTCTATACGGGCGCGATCGGCTGGCTCGATGCGGAGGCGCGTGCGGACGGCGCCGAGCCTGCCGCAGG CGCGTTCGCGCCGGAGCGTGCGGCGAGCCCGGCCGCAGGCACGGCGTCGGATGGCGCGTGCGCGGGCGAAACCGCGTCGA AGCAGGCGTCGAAGCGTGCCGGCGCGACAAGCCCGGCCGGCGCGTGCGGCGATTTCTGCCTGTCGGTCGCAATCCGCACG CTGACGCTCGACGCGCCGTCGGCCGGCGGCGAGCGGCGCGGCACGATGGGCGTCGGCGCGGGCATCGTGCTCGACAGCGT TGCCGCCGACGAATACGCGGAGTGCGAATTGAAGGCGCGTTTCCTGACCGACGCCGAGCCCGGCTTCCAGTTGTTCGAGA CGATGCTCGCCACGCGTGACGCCGGCGTGCGCCATCTCGACCGCCATGTCGCGCGGCTGCGCGCGAGTGCCGACGCGCTC GGCTTCGCGTTCGACGAAGCGGCGGCCAGGCAGCGCATCGGCGCGCGCTGCGTGCAGCTCGGCGACGGCGAGCATCGCTT GCGCGTCGCGCTCGCGAAGGACGGCGTGCTCGACATCGTGGCCGCGCCGCTCGCGCCGCTCGCGGGCGCCGCGGTGGCCG TATTGCTCGCGCCCGAGCACGGGTTCGCGCCGATGCGCTCGGACGACTTCCTGCTCGCGCACAAGACGACGCGCCGCGCC GATTACGATCGCGCGTGGAAAGCCGCGCAGGCGTGCGGTGCGTTCGACATGCTGTTCTTCAACGAACGCGGCGAATTGAC CGAAGGCGGGCGCACGAGCGTATTCGTGAAGCTGGCCGGGCGCTGGTTCACGCCGCCGCTGTCGTCGGGCGTGTTGCCGG GCGTGATGCGCGGCGCGCTGCTCGACGATCCGGCATGGCAGGCGTCCGAGCGTGTAATGACGCTGGACGACGTGCTGCGC GCCGACGCGCTGATGCTGACGAACGCGTTGCGCGGCGCGATGCCCGCGCAACTCGTGCGGGCCGCCGGCGCGGCGGCACC GCGATAG
Upstream 100 bases:
>100_bases AGGAGGCCCGCGTCACAGCCCGCAGAGCAAGAGCTGGTTCGACCGCGTGAAGAGCTTCTTCGAGTGACGCCCGGCGTGCG GTCCGCAGGTGAGAGGCAGG
Downstream 100 bases:
>100_bases GCGCGCGAAGAGCGGCCGGGCGGCCGCACGCATCGCCCTCGCGCTTCGGCTCGCAAAAAGCGGCATCCCGCACGTGCGGG ATGCCGCTTTTTTTGTCGAG
Product: PabB
Products: NA
Alternate protein names: ADC synthase; Para-aminobenzoate synthase component I [H]
Number of amino acids: Translated: 668; Mature: 667
Protein sequence:
>668_residues MTDEAGAVFALFDDCDSTAAARSSRLYSGFSHERACADPAGLDAVCAAVADDARRGLHAVVLGDYEFGRDLQLGKRGGGA LRFLLFAECRMLSREEADAWLASRDGGSAEPSAAGVAHVTKSVARDAFDAAIAAVHDALRAGDSYQINYTYRLHFDAFGA PLALYRRLRARQPVRYGALVALPGGAWIVSCSPELFVEKTGALLRARPMKGTAPRSDDPREDAAAARFLANDAKNRAENV MIVDLLRNDLARIARTGSVTVPALFSVEPYASVWQMTSTVEAGIVEGATFADVLRALFPCGSITGAPKHRTMQLIDALET TPRGLYTGAIGWLDAEARADGAEPAAGAFAPERAASPAAGTASDGACAGETASKQASKRAGATSPAGACGDFCLSVAIRT LTLDAPSAGGERRGTMGVGAGIVLDSVAADEYAECELKARFLTDAEPGFQLFETMLATRDAGVRHLDRHVARLRASADAL GFAFDEAAARQRIGARCVQLGDGEHRLRVALAKDGVLDIVAAPLAPLAGAAVAVLLAPEHGFAPMRSDDFLLAHKTTRRA DYDRAWKAAQACGAFDMLFFNERGELTEGGRTSVFVKLAGRWFTPPLSSGVLPGVMRGALLDDPAWQASERVMTLDDVLR ADALMLTNALRGAMPAQLVRAAGAAAPR
Sequences:
>Translated_668_residues MTDEAGAVFALFDDCDSTAAARSSRLYSGFSHERACADPAGLDAVCAAVADDARRGLHAVVLGDYEFGRDLQLGKRGGGA LRFLLFAECRMLSREEADAWLASRDGGSAEPSAAGVAHVTKSVARDAFDAAIAAVHDALRAGDSYQINYTYRLHFDAFGA PLALYRRLRARQPVRYGALVALPGGAWIVSCSPELFVEKTGALLRARPMKGTAPRSDDPREDAAAARFLANDAKNRAENV MIVDLLRNDLARIARTGSVTVPALFSVEPYASVWQMTSTVEAGIVEGATFADVLRALFPCGSITGAPKHRTMQLIDALET TPRGLYTGAIGWLDAEARADGAEPAAGAFAPERAASPAAGTASDGACAGETASKQASKRAGATSPAGACGDFCLSVAIRT LTLDAPSAGGERRGTMGVGAGIVLDSVAADEYAECELKARFLTDAEPGFQLFETMLATRDAGVRHLDRHVARLRASADAL GFAFDEAAARQRIGARCVQLGDGEHRLRVALAKDGVLDIVAAPLAPLAGAAVAVLLAPEHGFAPMRSDDFLLAHKTTRRA DYDRAWKAAQACGAFDMLFFNERGELTEGGRTSVFVKLAGRWFTPPLSSGVLPGVMRGALLDDPAWQASERVMTLDDVLR ADALMLTNALRGAMPAQLVRAAGAAAPR >Mature_667_residues TDEAGAVFALFDDCDSTAAARSSRLYSGFSHERACADPAGLDAVCAAVADDARRGLHAVVLGDYEFGRDLQLGKRGGGAL RFLLFAECRMLSREEADAWLASRDGGSAEPSAAGVAHVTKSVARDAFDAAIAAVHDALRAGDSYQINYTYRLHFDAFGAP LALYRRLRARQPVRYGALVALPGGAWIVSCSPELFVEKTGALLRARPMKGTAPRSDDPREDAAAARFLANDAKNRAENVM IVDLLRNDLARIARTGSVTVPALFSVEPYASVWQMTSTVEAGIVEGATFADVLRALFPCGSITGAPKHRTMQLIDALETT PRGLYTGAIGWLDAEARADGAEPAAGAFAPERAASPAAGTASDGACAGETASKQASKRAGATSPAGACGDFCLSVAIRTL TLDAPSAGGERRGTMGVGAGIVLDSVAADEYAECELKARFLTDAEPGFQLFETMLATRDAGVRHLDRHVARLRASADALG FAFDEAAARQRIGARCVQLGDGEHRLRVALAKDGVLDIVAAPLAPLAGAAVAVLLAPEHGFAPMRSDDFLLAHKTTRRAD YDRAWKAAQACGAFDMLFFNERGELTEGGRTSVFVKLAGRWFTPPLSSGVLPGVMRGALLDDPAWQASERVMTLDDVLRA DALMLTNALRGAMPAQLVRAAGAAAPR
Specific function: Catalyzes the biosynthesis of 4-amino-4-deoxychorismate (ADC) from chorismate and glutamine [H]
COG id: COG0147
COG function: function code EH; Anthranilate/para-aminobenzoate synthases component I
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the anthranilate synthase component I family [H]
Homologues:
Organism=Escherichia coli, GI1788114, Length=235, Percent_Identity=41.7021276595745, Blast_Score=177, Evalue=2e-45, Organism=Escherichia coli, GI1787518, Length=223, Percent_Identity=31.8385650224215, Blast_Score=90, Evalue=4e-19, Organism=Escherichia coli, GI1786809, Length=177, Percent_Identity=27.1186440677966, Blast_Score=72, Evalue=1e-13, Organism=Saccharomyces cerevisiae, GI6320935, Length=213, Percent_Identity=31.924882629108, Blast_Score=107, Evalue=5e-24, Organism=Saccharomyces cerevisiae, GI6324361, Length=240, Percent_Identity=29.5833333333333, Blast_Score=96, Evalue=2e-20,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005801 - InterPro: IPR019999 - InterPro: IPR006805 - InterPro: IPR015890 [H]
Pfam domain/function: PF04715 Anth_synt_I_N; PF00425 Chorismate_bind [H]
EC number: =2.6.1.85 [H]
Molecular weight: Translated: 70310; Mature: 70179
Theoretical pI: Translated: 6.17; Mature: 6.17
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDEAGAVFALFDDCDSTAAARSSRLYSGFSHERACADPAGLDAVCAAVADDARRGLHAV CCCCCCEEEEEECCCCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHCCEEEE VLGDYEFGRDLQLGKRGGGALRFLLFAECRMLSREEADAWLASRDGGSAEPSAAGVAHVT EEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHH KSVARDAFDAAIAAVHDALRAGDSYQINYTYRLHFDAFGAPLALYRRLRARQPVRYGALV HHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEEECCCCCHHHHHHHHHHCCCCCCCEEE ALPGGAWIVSCSPELFVEKTGALLRARPMKGTAPRSDDPREDAAAARFLANDAKNRAENV EECCCCEEEECCHHHHHHHCCCCEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCE MIVDLLRNDLARIARTGSVTVPALFSVEPYASVWQMTSTVEAGIVEGATFADVLRALFPC EEHHHHHHHHHHHHHCCCEEECEEEECCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCC GSITGAPKHRTMQLIDALETTPRGLYTGAIGWLDAEARADGAEPAAGAFAPERAASPAAG CCCCCCCCHHHHHHHHHHHCCCCCEEECCCEEECCHHCCCCCCCCCCCCCCHHCCCCCCC TASDGACAGETASKQASKRAGATSPAGACGDFCLSVAIRTLTLDAPSAGGERRGTMGVGA CCCCCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHEEEECCCCCCCCCCCCCCCC GIVLDSVAADEYAECELKARFLTDAEPGFQLFETMLATRDAGVRHLDRHVARLRASADAL HHHHHHHHCCCHHHHHEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GFAFDEAAARQRIGARCVQLGDGEHRLRVALAKDGVLDIVAAPLAPLAGAAVAVLLAPEH HHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHEEEEEECCCC GFAPMRSDDFLLAHKTTRRADYDRAWKAAQACGAFDMLFFNERGELTEGGRTSVFVKLAG CCCCCCCCCEEEEECHHHCCCHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCEEEEEECC RWFTPPLSSGVLPGVMRGALLDDPAWQASERVMTLDDVLRADALMLTNALRGAMPAQLVR CCCCCCCCCCCCHHHHHCCCCCCCCCHHHCCEECHHHHHHHHHHHHHHHHHCCHHHHHHH AAGAAAPR HHCCCCCC >Mature Secondary Structure TDEAGAVFALFDDCDSTAAARSSRLYSGFSHERACADPAGLDAVCAAVADDARRGLHAV CCCCCEEEEEECCCCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHCCEEEE VLGDYEFGRDLQLGKRGGGALRFLLFAECRMLSREEADAWLASRDGGSAEPSAAGVAHVT EEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHH KSVARDAFDAAIAAVHDALRAGDSYQINYTYRLHFDAFGAPLALYRRLRARQPVRYGALV HHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEEECCCCCHHHHHHHHHHCCCCCCCEEE ALPGGAWIVSCSPELFVEKTGALLRARPMKGTAPRSDDPREDAAAARFLANDAKNRAENV EECCCCEEEECCHHHHHHHCCCCEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCE MIVDLLRNDLARIARTGSVTVPALFSVEPYASVWQMTSTVEAGIVEGATFADVLRALFPC EEHHHHHHHHHHHHHCCCEEECEEEECCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCC GSITGAPKHRTMQLIDALETTPRGLYTGAIGWLDAEARADGAEPAAGAFAPERAASPAAG CCCCCCCCHHHHHHHHHHHCCCCCEEECCCEEECCHHCCCCCCCCCCCCCCHHCCCCCCC TASDGACAGETASKQASKRAGATSPAGACGDFCLSVAIRTLTLDAPSAGGERRGTMGVGA CCCCCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHEEEECCCCCCCCCCCCCCCC GIVLDSVAADEYAECELKARFLTDAEPGFQLFETMLATRDAGVRHLDRHVARLRASADAL HHHHHHHHCCCHHHHHEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GFAFDEAAARQRIGARCVQLGDGEHRLRVALAKDGVLDIVAAPLAPLAGAAVAVLLAPEH HHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHEEEEEECCCC GFAPMRSDDFLLAHKTTRRADYDRAWKAAQACGAFDMLFFNERGELTEGGRTSVFVKLAG CCCCCCCCCEEEEECHHHCCCHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCEEEEEECC RWFTPPLSSGVLPGVMRGALLDDPAWQASERVMTLDDVLRADALMLTNALRGAMPAQLVR CCCCCCCCCCCCHHHHHCCCCCCCCCHHHCCEECHHHHHHHHHHHHHHHHHCCHHHHHHH AAGAAAPR HHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 2123867; 7584024; 9384377 [H]