| Definition | Burkholderia pseudomallei MSHR346 chromosome I, complete genome. |
|---|---|
| Accession | NC_012695 |
| Length | 4,098,576 |
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The map label for this gene is 237813671
Identifier: 237813671
GI number: 237813671
Start: 3330300
End: 3330986
Strand: Direct
Name: 237813671
Synonym: GBP346_A3448
Alternate gene names: NA
Gene position: 3330300-3330986 (Clockwise)
Preceding gene: 237813670
Following gene: 237813672
Centisome position: 81.26
GC content: 64.48
Gene sequence:
>687_bases ATGACTAATCTGGCACTTTTCGATCTGGATCACACGCTGATCCCCACCGATAGCGATCACGAGTGGGGCCGCTTCATGGT CCGGCTCGGCATCGTCGACGCGGACAGCTTCTCGCGTCAGAACGACCGCTTCTACGCCGACTACAAGGCCGGCAAGCTCG ACATCCACGCGTACCTGAGCGCGATGCTCACGCCGCTCGCGAAGTATTCGCGCGCGCAGCTCGCGCAGTGGCACGACCGG TACATGCACGAAGTGATCCGGCCGGCGATGCTGCCCGCCGCGATCGAGCTCGTGCGCCGGCATCAGGACGCGGGCGACCT CTGCTGCATCGTCACCGCGACGAACGAATTCATCACGCGTCCGATCGCGACCGCGTTCGGCGTCGACACGCTGATCGCCT GCGAAGTGGAAACCGTCGACGGCCATCCCGATTCCGCGTTCACCGGCCGCCCGACGGGCACGCCGAGCTACCGCGAAGGC AAGATCACCCGCACGCAGGCGTGGCTCGCATCGCTCGGCAAGCGCTGGGACGATTTCGACCGCAGCTATTTCTACAGCGA TTCGCACAACGACATTCCGCTCCTCGAAAAAGTCACCGACCCGATCGCGACCAATCCCGACGACACGCTGCGCGCATACG CACGCGAGCACGGCTGGCGCATCCTCGACCTCTTCCAACCGTCGTGA
Upstream 100 bases:
>100_bases CGCGGTGACGCTGCCGCTGCTGCGCGCGATGCTGGCCGCGCCGGAACGCGAGGAGCCCGCGCCGGGCCGGTTCAAGTAGC TTCAAGTAAAATGCGCATCC
Downstream 100 bases:
>100_bases TCAAAAAACTCATCCGCAAGCTGCTCGGGCAGGACGCCCGTACGGCGCAAGACGCGCCGCAGGACCCGGCCGAGCCGCGC TCGGCCGCGCCCGCCGCCCC
Product: HAD-superfamily subfamily IB hydrolase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 228; Mature: 227
Protein sequence:
>228_residues MTNLALFDLDHTLIPTDSDHEWGRFMVRLGIVDADSFSRQNDRFYADYKAGKLDIHAYLSAMLTPLAKYSRAQLAQWHDR YMHEVIRPAMLPAAIELVRRHQDAGDLCCIVTATNEFITRPIATAFGVDTLIACEVETVDGHPDSAFTGRPTGTPSYREG KITRTQAWLASLGKRWDDFDRSYFYSDSHNDIPLLEKVTDPIATNPDDTLRAYAREHGWRILDLFQPS
Sequences:
>Translated_228_residues MTNLALFDLDHTLIPTDSDHEWGRFMVRLGIVDADSFSRQNDRFYADYKAGKLDIHAYLSAMLTPLAKYSRAQLAQWHDR YMHEVIRPAMLPAAIELVRRHQDAGDLCCIVTATNEFITRPIATAFGVDTLIACEVETVDGHPDSAFTGRPTGTPSYREG KITRTQAWLASLGKRWDDFDRSYFYSDSHNDIPLLEKVTDPIATNPDDTLRAYAREHGWRILDLFQPS >Mature_227_residues TNLALFDLDHTLIPTDSDHEWGRFMVRLGIVDADSFSRQNDRFYADYKAGKLDIHAYLSAMLTPLAKYSRAQLAQWHDRY MHEVIRPAMLPAAIELVRRHQDAGDLCCIVTATNEFITRPIATAFGVDTLIACEVETVDGHPDSAFTGRPTGTPSYREGK ITRTQAWLASLGKRWDDFDRSYFYSDSHNDIPLLEKVTDPIATNPDDTLRAYAREHGWRILDLFQPS
Specific function: Unknown
COG id: COG0560
COG function: function code E; Phosphoserine phosphatase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the serB family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR023214 - InterPro: IPR006383 - InterPro: IPR006385 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25965; Mature: 25834
Theoretical pI: Translated: 5.53; Mature: 5.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTNLALFDLDHTLIPTDSDHEWGRFMVRLGIVDADSFSRQNDRFYADYKAGKLDIHAYLS CCCEEEEECCCEECCCCCCCHHHEEEEEEEEEECCCCCCCCCCEEEECCCCCCHHHHHHH AMLTPLAKYSRAQLAQWHDRYMHEVIRPAMLPAAIELVRRHQDAGDLCCIVTATNEFITR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECHHHHHH PIATAFGVDTLIACEVETVDGHPDSAFTGRPTGTPSYREGKITRTQAWLASLGKRWDDFD HHHHHHCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCHHC RSYFYSDSHNDIPLLEKVTDPIATNPDDTLRAYAREHGWRILDLFQPS CCEEECCCCCCCCHHHHHCCCCCCCCHHHHHHHHHHCCCEEEEEECCC >Mature Secondary Structure TNLALFDLDHTLIPTDSDHEWGRFMVRLGIVDADSFSRQNDRFYADYKAGKLDIHAYLS CCEEEEECCCEECCCCCCCHHHEEEEEEEEEECCCCCCCCCCEEEECCCCCCHHHHHHH AMLTPLAKYSRAQLAQWHDRYMHEVIRPAMLPAAIELVRRHQDAGDLCCIVTATNEFITR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECHHHHHH PIATAFGVDTLIACEVETVDGHPDSAFTGRPTGTPSYREGKITRTQAWLASLGKRWDDFD HHHHHHCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCHHC RSYFYSDSHNDIPLLEKVTDPIATNPDDTLRAYAREHGWRILDLFQPS CCEEECCCCCCCCHHHHHCCCCCCCCHHHHHHHHHHCCCEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA