| Definition | Burkholderia pseudomallei MSHR346 chromosome I, complete genome. |
|---|---|
| Accession | NC_012695 |
| Length | 4,098,576 |
Click here to switch to the map view.
The map label for this gene is 237813617
Identifier: 237813617
GI number: 237813617
Start: 3270950
End: 3271894
Strand: Reverse
Name: 237813617
Synonym: GBP346_A3394
Alternate gene names: NA
Gene position: 3271894-3270950 (Counterclockwise)
Preceding gene: 237813618
Following gene: 237813616
Centisome position: 79.83
GC content: 66.14
Gene sequence:
>945_bases ATGAAAGTATTCATCCTTCACCCGGGGAAGGCGAATTACCCGGAAATCGCCGCGTACCGCGACTTTCTCGGCCCGCGCGG CTTCGACGTCCACGATGGCGACGCGAGCGCGTATGCGCGGTTCGATGGGCGACACGATTGCATTCTGTGGTGCATCATGG GCTTTTATCGCGCGTTGCCGCCCGCGCGGTTCGTGATTCACGATTACCGGTCGCTGTCGGTCGGCCGGCTCGCGGCGCTC AAGGATACGGTCAAGCGTGCGTGGAACGCAAAGCCGGCTCTGCGGATTTTCCAGAACGAGCGCATGCGCGACGCGATGGC GTTTCGCGACGGCATACCGTCGCTGCTGCTGCCGATGGGCGTGCCGGACTGGATCTTCGGGATCGCGAACGAACCGGCGG GCGCGGGCCCGGCCGGCCGGTTCTGCTACATCGGCGAGATGAGCCGCGAGCGCGGCTTCCACAAGGTGTTGGCCGCGTAT CGTGCCGCGCCGCGCACGGCGCGCGACTCGCTCGTGCTCGTCGGGCAGCCGGAGCCGGAGATCTACGAGGCGTTCAGACA TGTCGAGGGCCTCGTGTTCGTCGGCCGCGTGCCGCAGCGCGATGCGCTCAAGATCGTGCAACGCTCCGACTATGCGGTTT GCTATTTTCCGTACCACCGTCCACACCGCTTCCAGACGCCGACGAAGCTGCTCGAGTACGCGGCGCTCGGCAAGAAGATC ATTTGCAACGACGCGCCGTCGAATGTCGACGCGATCAACGCGCTCGGCATCCGCTCGCATGTCACGGGCGCGGCGATATT CGACGAGTTGCTGCCGCTCGCGCAGGTGCGCGCGCAGCGCAACGATCCCGCGCGGCTGAAGCGCCTCGAATGGACGGCCG TGATCGCGCGATCGGGCGTGCTCACGCATATCGAGGCGGCGGCCTCGATGCGAGGTGCGCGATGA
Upstream 100 bases:
>100_bases TCGGCGCGGGCGCCGTGCTGCTGCGGGACGTGCCGGACGGCGGCGTCGCGGTGGGCGTGCCGGCTCGCGTGCTGGAGAAC GGGAAGGAGCAGAGCGCAGC
Downstream 100 bases:
>100_bases CGATCGATATCGCCGGCGGCCGGCATCGCGATGCGCTGCCGAAGCGCGATGCCGGGGCCGGGGCGTGCGCGCGCATGAAG ATCGTGCAGGTCCTCGAATC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 314; Mature: 314
Protein sequence:
>314_residues MKVFILHPGKANYPEIAAYRDFLGPRGFDVHDGDASAYARFDGRHDCILWCIMGFYRALPPARFVIHDYRSLSVGRLAAL KDTVKRAWNAKPALRIFQNERMRDAMAFRDGIPSLLLPMGVPDWIFGIANEPAGAGPAGRFCYIGEMSRERGFHKVLAAY RAAPRTARDSLVLVGQPEPEIYEAFRHVEGLVFVGRVPQRDALKIVQRSDYAVCYFPYHRPHRFQTPTKLLEYAALGKKI ICNDAPSNVDAINALGIRSHVTGAAIFDELLPLAQVRAQRNDPARLKRLEWTAVIARSGVLTHIEAAASMRGAR
Sequences:
>Translated_314_residues MKVFILHPGKANYPEIAAYRDFLGPRGFDVHDGDASAYARFDGRHDCILWCIMGFYRALPPARFVIHDYRSLSVGRLAAL KDTVKRAWNAKPALRIFQNERMRDAMAFRDGIPSLLLPMGVPDWIFGIANEPAGAGPAGRFCYIGEMSRERGFHKVLAAY RAAPRTARDSLVLVGQPEPEIYEAFRHVEGLVFVGRVPQRDALKIVQRSDYAVCYFPYHRPHRFQTPTKLLEYAALGKKI ICNDAPSNVDAINALGIRSHVTGAAIFDELLPLAQVRAQRNDPARLKRLEWTAVIARSGVLTHIEAAASMRGAR >Mature_314_residues MKVFILHPGKANYPEIAAYRDFLGPRGFDVHDGDASAYARFDGRHDCILWCIMGFYRALPPARFVIHDYRSLSVGRLAAL KDTVKRAWNAKPALRIFQNERMRDAMAFRDGIPSLLLPMGVPDWIFGIANEPAGAGPAGRFCYIGEMSRERGFHKVLAAY RAAPRTARDSLVLVGQPEPEIYEAFRHVEGLVFVGRVPQRDALKIVQRSDYAVCYFPYHRPHRFQTPTKLLEYAALGKKI ICNDAPSNVDAINALGIRSHVTGAAIFDELLPLAQVRAQRNDPARLKRLEWTAVIARSGVLTHIEAAASMRGAR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35154; Mature: 35154
Theoretical pI: Translated: 10.03; Mature: 10.03
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKVFILHPGKANYPEIAAYRDFLGPRGFDVHDGDASAYARFDGRHDCILWCIMGFYRALP CEEEEECCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCEEECCCCCHHHHHHHHHHHHHCC PARFVIHDYRSLSVGRLAALKDTVKRAWNAKPALRIFQNERMRDAMAFRDGIPSLLLPMG CHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHCC VPDWIFGIANEPAGAGPAGRFCYIGEMSRERGFHKVLAAYRAAPRTARDSLVLVGQPEPE CHHHHHCCCCCCCCCCCCCCEEEECCHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCHH IYEAFRHVEGLVFVGRVPQRDALKIVQRSDYAVCYFPYHRPHRFQTPTKLLEYAALGKKI HHHHHHHHCCEEEECCCCCHHHHHHHHCCCCEEEEECCCCCCCCCCHHHHHHHHHCCCEE ICNDAPSNVDAINALGIRSHVTGAAIFDELLPLAQVRAQRNDPARLKRLEWTAVIARSGV EECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCH LTHIEAAASMRGAR HHHHHHHHHHCCCC >Mature Secondary Structure MKVFILHPGKANYPEIAAYRDFLGPRGFDVHDGDASAYARFDGRHDCILWCIMGFYRALP CEEEEECCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCEEECCCCCHHHHHHHHHHHHHCC PARFVIHDYRSLSVGRLAALKDTVKRAWNAKPALRIFQNERMRDAMAFRDGIPSLLLPMG CHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHCC VPDWIFGIANEPAGAGPAGRFCYIGEMSRERGFHKVLAAYRAAPRTARDSLVLVGQPEPE CHHHHHCCCCCCCCCCCCCCEEEECCHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCHH IYEAFRHVEGLVFVGRVPQRDALKIVQRSDYAVCYFPYHRPHRFQTPTKLLEYAALGKKI HHHHHHHHCCEEEECCCCCHHHHHHHHCCCCEEEEECCCCCCCCCCHHHHHHHHHCCCEE ICNDAPSNVDAINALGIRSHVTGAAIFDELLPLAQVRAQRNDPARLKRLEWTAVIARSGV EECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCH LTHIEAAASMRGAR HHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA