| Definition | Burkholderia pseudomallei MSHR346 chromosome I, complete genome. |
|---|---|
| Accession | NC_012695 |
| Length | 4,098,576 |
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The map label for this gene is 237813562
Identifier: 237813562
GI number: 237813562
Start: 3221386
End: 3222168
Strand: Reverse
Name: 237813562
Synonym: GBP346_A3338
Alternate gene names: NA
Gene position: 3222168-3221386 (Counterclockwise)
Preceding gene: 237813563
Following gene: 237813561
Centisome position: 78.62
GC content: 72.03
Gene sequence:
>783_bases ATGAGACACCTCCTGACGAAACCCGTCGGCGCCGCGCTGCTGGCCGCGGCCGCCGCGCTCGCGCAAGCGCACGCGGCCGA GCTGCACGTGATGAATTCCGGCGGCTTCACGGCCGCGTACCAATTGCTCGCGCCGAAGTTCGAGGCGGCGACGGGCAACA CGCTCGACATCGCGTACGGTCCCTCGATGGGCGCCACGCCCGAAGCCATTCCGAACCGGCTCGCGCGCGGCGAGCCGGCC GACGTCGTGATCATGGTCGGCTATGCGCTCGACAAGCTGATCCGCGAGGGCAAGGTCGAGCCGGGCTCGCGCGTCGAGCT CGCGGATTCGCGGATCGGCGCGGTCGTGCGCGCGGGCGAGCCGGCGCCCGACATCGGCACGCCCGCCGCGTTGAAGGCCG CGCTGCTGCAAGCGAAGACGGTCGCGTACTCGGACAGCGCGAGCGGCGTCTACGTTCAGAACGAGCTGTTCAAGCGGCTC GGCGTCGAGGCCGAGGTCAAGCCGAAGGCGACGATGGTGCCGCGCGTGCCGGTGGCCTCGAAGGTCGCCGATGGCACCTA TGCGCTCGGCTTCCAGCAGGTGAGCGAGCTGTTGCCGGTGCCGGGCGTGACGTTCGTCGGCAAGCTCCCGGAACCGCTGC AATCGGTGACGCGCTTCGCGGGCGGGATCCCGGTCGGCGCGAAGCATCCGCGCGAGGCGCGCGCGCTGCTCGACTATCTG GCGTCCCCCGCGGCGGCCGGCGACGTGCGCAAGACGGGGCTCGACCCGGTGCCGGCGCGCTGA
Upstream 100 bases:
>100_bases AGTGAACCGATCAGTACAAACCTGCGCTTTTCAGCGGAACCGGTTTCCGCGAAGATGATCGTTGCCTTCTTTCCGATACC GATCGAAAACGACGACAACG
Downstream 100 bases:
>100_bases TTCGCCGCTTGGCGGGCGCGCGCCGCGTGAGGGGCGACGCGTGATGCGTGACGGGCGATACGCGGCGCGAAGCGTCTTCG CCGGTTGCCGGCAAATGGCC
Product: ABC-type molybdate transport system, periplasmic component
Products: NA
Alternate protein names: ABC Transporter Periplasmic Molybdate; ABC Transporter; PROX Protein
Number of amino acids: Translated: 260; Mature: 260
Protein sequence:
>260_residues MRHLLTKPVGAALLAAAAALAQAHAAELHVMNSGGFTAAYQLLAPKFEAATGNTLDIAYGPSMGATPEAIPNRLARGEPA DVVIMVGYALDKLIREGKVEPGSRVELADSRIGAVVRAGEPAPDIGTPAALKAALLQAKTVAYSDSASGVYVQNELFKRL GVEAEVKPKATMVPRVPVASKVADGTYALGFQQVSELLPVPGVTFVGKLPEPLQSVTRFAGGIPVGAKHPREARALLDYL ASPAAAGDVRKTGLDPVPAR
Sequences:
>Translated_260_residues MRHLLTKPVGAALLAAAAALAQAHAAELHVMNSGGFTAAYQLLAPKFEAATGNTLDIAYGPSMGATPEAIPNRLARGEPA DVVIMVGYALDKLIREGKVEPGSRVELADSRIGAVVRAGEPAPDIGTPAALKAALLQAKTVAYSDSASGVYVQNELFKRL GVEAEVKPKATMVPRVPVASKVADGTYALGFQQVSELLPVPGVTFVGKLPEPLQSVTRFAGGIPVGAKHPREARALLDYL ASPAAAGDVRKTGLDPVPAR >Mature_260_residues MRHLLTKPVGAALLAAAAALAQAHAAELHVMNSGGFTAAYQLLAPKFEAATGNTLDIAYGPSMGATPEAIPNRLARGEPA DVVIMVGYALDKLIREGKVEPGSRVELADSRIGAVVRAGEPAPDIGTPAALKAALLQAKTVAYSDSASGVYVQNELFKRL GVEAEVKPKATMVPRVPVASKVADGTYALGFQQVSELLPVPGVTFVGKLPEPLQSVTRFAGGIPVGAKHPREARALLDYL ASPAAAGDVRKTGLDPVPAR
Specific function: Unknown
COG id: COG0725
COG function: function code P; ABC-type molybdate transport system, periplasmic component
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26855; Mature: 26855
Theoretical pI: Translated: 9.52; Mature: 9.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRHLLTKPVGAALLAAAAALAQAHAAELHVMNSGGFTAAYQLLAPKFEAATGNTLDIAYG CCCCHHCHHHHHHHHHHHHHHHHHHHHEEEECCCCHHHHHHHHCCCCCCCCCCEEEEEEC PSMGATPEAIPNRLARGEPADVVIMVGYALDKLIREGKVEPGSRVELADSRIGAVVRAGE CCCCCCHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHCCCCCCCCEEECHHHHCEEEECCC PAPDIGTPAALKAALLQAKTVAYSDSASGVYVQNELFKRLGVEAEVKPKATMVPRVPVAS CCCCCCCHHHHHHHHHHHHHHEECCCCCCEEEHHHHHHHHCCCCCCCCCCCCCCCCCCHH KVADGTYALGFQQVSELLPVPGVTFVGKLPEPLQSVTRFAGGIPVGAKHPREARALLDYL HHCCCHHHHHHHHHHHHCCCCCCHHCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHH ASPAAAGDVRKTGLDPVPAR HCCCCCCCHHHCCCCCCCCC >Mature Secondary Structure MRHLLTKPVGAALLAAAAALAQAHAAELHVMNSGGFTAAYQLLAPKFEAATGNTLDIAYG CCCCHHCHHHHHHHHHHHHHHHHHHHHEEEECCCCHHHHHHHHCCCCCCCCCCEEEEEEC PSMGATPEAIPNRLARGEPADVVIMVGYALDKLIREGKVEPGSRVELADSRIGAVVRAGE CCCCCCHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHCCCCCCCCEEECHHHHCEEEECCC PAPDIGTPAALKAALLQAKTVAYSDSASGVYVQNELFKRLGVEAEVKPKATMVPRVPVAS CCCCCCCHHHHHHHHHHHHHHEECCCCCCEEEHHHHHHHHCCCCCCCCCCCCCCCCCCHH KVADGTYALGFQQVSELLPVPGVTFVGKLPEPLQSVTRFAGGIPVGAKHPREARALLDYL HHCCCHHHHHHHHHHHHCCCCCCHHCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHH ASPAAAGDVRKTGLDPVPAR HCCCCCCCHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA