| Definition | Burkholderia pseudomallei MSHR346 chromosome I, complete genome. |
|---|---|
| Accession | NC_012695 |
| Length | 4,098,576 |
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The map label for this gene is 237813517
Identifier: 237813517
GI number: 237813517
Start: 3180092
End: 3181342
Strand: Reverse
Name: 237813517
Synonym: GBP346_A3293
Alternate gene names: NA
Gene position: 3181342-3180092 (Counterclockwise)
Preceding gene: 237813518
Following gene: 237813516
Centisome position: 77.62
GC content: 74.02
Gene sequence:
>1251_bases GTGCCCGCGGCCGAGGCGGCGCTGCGCACCGCGCAACAAGCCTTCGAGCGGCGCGCCGATCCGGCCGAACCGCTCGCCGC CGCCGCGGCGGCGCTGCGGGAGGCAGGGTGGCTCGCCGCGCAACGCTTTGTCGTTGCGCTGGCTCATGCCGCGCCGCTTG CCGCGACCGAACTCCAACCGATTGCATTCGAGGCCGCGCTGCGGGATTTCCGCGCGGCGCTCGAGCGGCACAATTTGCGC GAACTCGCCTGCTCGCCGTTGCTCTTCGAGCATTACCGCGCGCTGTGCGCACTGACCGCGAGCGACTTGCGCGCGGATAC GTCGCAGGGTGCGCTCGCGCTTGCCGGCCGCCCGGTGCCGCCCGCGACACTGTATGCGCTGTCGCCGCATGCGCTCGCGC ACTTGCGCGCGCGCTACGAGCAGGCGCTTCTCGGCGCGCTGCGCGCATCCGGCACGGCGGCCGACAAGGCGCTCGACGGG CTCGCCGATTGCACGGCCGAACTGGTCGGGCCGTTTCCCTATGACTTTTGGCGTCTTGCGGGGGCGTGCATGCGTGTGCT GCGGGTGCGCGGCGGTGTCGAGCTCAAGCGTTTTCTCGCGCGCTGCAATCTGCTGCTCGGCGAGCAGGCGCGCGGATTGC GCATTGCGCCCGCCGCGCTCGTCGGCGAGGCGCTTGCGCTTTTCTGGCGCGACTACGCGCTGTACGGCGCGGCGGCGGAG GACGTCGCCGATGTCGAGCTGCTGCACGACTACGGGCTGACCGTCGCGTGGCATGTCGCGGGCACGCAGGCGTCCGAGGC CCTGTGGGAGGCCGACGCCGCGCGCGCCGAAGCGGACGCGGTGCGCGGCGCGGCGACGCGCGAGCTCGGCGTCGTCACCG TCAACGCCCAGGCGTATGAGGATTTCCTGCAGACGGCCGACGCGTCGATGACCGAGCTGGCGCTCGATCCGCGCGCGGCC GATGCGGGCGCCGCGTTGCAGGCGGCGCAGGCCGCGTATCGCGTCGGCTCGGCCGCATGCGCGCTCGGTCTCGGGCACAC GGCGCTCGTTGCCGATGCGCTCGGTCTCGCATGGCGCCGCCGTGCGCATCTCGGCGCGACGGACGACGCATGCGCCAGCG CGTGCCGGCAGGCGGCCGAAGCATTGCGCGCCGCGTTGCACCGGATCGCGGCGGGCATGGCGCCGCCCGATCTGTCCGAC GCGCGCGCGGCGCTTGCGGGCGCGTTGTCGGGGGCCGGCCGCGGCGCATGA
Upstream 100 bases:
>100_bases CGGCGCGGCTTCGTTTCTGGTGCTGACGCTCGTGCCCATTACCTCTGACATTGCGACGGTTCCGGTTCTCGACGCGTTGC CCAATCCGCGAGGCGGCGCA
Downstream 100 bases:
>100_bases CGGCGCATCGCGCGGCGCGTGGCGACGCGCGCCGCAAGGCCGGATTCTTGCTTTCGGCCGATGCGGCGCAATCGCGCGCG GCGCGCGTGCCGATTGGTCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 416; Mature: 415
Protein sequence:
>416_residues MPAAEAALRTAQQAFERRADPAEPLAAAAAALREAGWLAAQRFVVALAHAAPLAATELQPIAFEAALRDFRAALERHNLR ELACSPLLFEHYRALCALTASDLRADTSQGALALAGRPVPPATLYALSPHALAHLRARYEQALLGALRASGTAADKALDG LADCTAELVGPFPYDFWRLAGACMRVLRVRGGVELKRFLARCNLLLGEQARGLRIAPAALVGEALALFWRDYALYGAAAE DVADVELLHDYGLTVAWHVAGTQASEALWEADAARAEADAVRGAATRELGVVTVNAQAYEDFLQTADASMTELALDPRAA DAGAALQAAQAAYRVGSAACALGLGHTALVADALGLAWRRRAHLGATDDACASACRQAAEALRAALHRIAAGMAPPDLSD ARAALAGALSGAGRGA
Sequences:
>Translated_416_residues MPAAEAALRTAQQAFERRADPAEPLAAAAAALREAGWLAAQRFVVALAHAAPLAATELQPIAFEAALRDFRAALERHNLR ELACSPLLFEHYRALCALTASDLRADTSQGALALAGRPVPPATLYALSPHALAHLRARYEQALLGALRASGTAADKALDG LADCTAELVGPFPYDFWRLAGACMRVLRVRGGVELKRFLARCNLLLGEQARGLRIAPAALVGEALALFWRDYALYGAAAE DVADVELLHDYGLTVAWHVAGTQASEALWEADAARAEADAVRGAATRELGVVTVNAQAYEDFLQTADASMTELALDPRAA DAGAALQAAQAAYRVGSAACALGLGHTALVADALGLAWRRRAHLGATDDACASACRQAAEALRAALHRIAAGMAPPDLSD ARAALAGALSGAGRGA >Mature_415_residues PAAEAALRTAQQAFERRADPAEPLAAAAAALREAGWLAAQRFVVALAHAAPLAATELQPIAFEAALRDFRAALERHNLRE LACSPLLFEHYRALCALTASDLRADTSQGALALAGRPVPPATLYALSPHALAHLRARYEQALLGALRASGTAADKALDGL ADCTAELVGPFPYDFWRLAGACMRVLRVRGGVELKRFLARCNLLLGEQARGLRIAPAALVGEALALFWRDYALYGAAAED VADVELLHDYGLTVAWHVAGTQASEALWEADAARAEADAVRGAATRELGVVTVNAQAYEDFLQTADASMTELALDPRAAD AGAALQAAQAAYRVGSAACALGLGHTALVADALGLAWRRRAHLGATDDACASACRQAAEALRAALHRIAAGMAPPDLSDA RAALAGALSGAGRGA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43299; Mature: 43167
Theoretical pI: Translated: 6.19; Mature: 6.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPAAEAALRTAQQAFERRADPAEPLAAAAAALREAGWLAAQRFVVALAHAAPLAATELQP CCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCH IAFEAALRDFRAALERHNLRELACSPLLFEHYRALCALTASDLRADTSQGALALAGRPVP HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCC PATLYALSPHALAHLRARYEQALLGALRASGTAADKALDGLADCTAELVGPFPYDFWRLA CHHEEEECHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHH GACMRVLRVRGGVELKRFLARCNLLLGEQARGLRIAPAALVGEALALFWRDYALYGAAAE HHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCEECHHHHHHHHHHHHHHHHHHHCCCHH DVADVELLHDYGLTVAWHVAGTQASEALWEADAARAEADAVRGAATRELGVVTVNAQAYE HHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHCCHHHCCEEEEECHHHHH DFLQTADASMTELALDPRAADAGAALQAAQAAYRVGSAACALGLGHTALVADALGLAWRR HHHHHCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH RAHLGATDDACASACRQAAEALRAALHRIAAGMAPPDLSDARAALAGALSGAGRGA HHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCC >Mature Secondary Structure PAAEAALRTAQQAFERRADPAEPLAAAAAALREAGWLAAQRFVVALAHAAPLAATELQP CHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCH IAFEAALRDFRAALERHNLRELACSPLLFEHYRALCALTASDLRADTSQGALALAGRPVP HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCC PATLYALSPHALAHLRARYEQALLGALRASGTAADKALDGLADCTAELVGPFPYDFWRLA CHHEEEECHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHH GACMRVLRVRGGVELKRFLARCNLLLGEQARGLRIAPAALVGEALALFWRDYALYGAAAE HHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCEECHHHHHHHHHHHHHHHHHHHCCCHH DVADVELLHDYGLTVAWHVAGTQASEALWEADAARAEADAVRGAATRELGVVTVNAQAYE HHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHCCHHHCCEEEEECHHHHH DFLQTADASMTELALDPRAADAGAALQAAQAAYRVGSAACALGLGHTALVADALGLAWRR HHHHHCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH RAHLGATDDACASACRQAAEALRAALHRIAAGMAPPDLSDARAALAGALSGAGRGA HHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA