Definition Burkholderia pseudomallei MSHR346 chromosome I, complete genome.
Accession NC_012695
Length 4,098,576

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The map label for this gene is 237813499

Identifier: 237813499

GI number: 237813499

Start: 3162993

End: 3164717

Strand: Reverse

Name: 237813499

Synonym: GBP346_A3275

Alternate gene names: NA

Gene position: 3164717-3162993 (Counterclockwise)

Preceding gene: 237813500

Following gene: 237813498

Centisome position: 77.22

GC content: 59.19

Gene sequence:

>1725_bases
ATGAATTCTGCAACTTACCAGTTCCACTATCACGAGTATTCGGTGTACAGCAATGTCGTTGGGCTGATCACGGAGTTCGG
CGCGCGCGATGGCGTGCATTTGGACATCGGCTGTGGATATGGCGCGATCGCGGAACCCGTTCGCGACCTCGGGCTCACGT
ACATCGGTTTCGATGCAGACGAGGATTCGCTGCGGGATTTGCGATCGCGAGGCTTCGAGGCGAAGCGAATCGACCTGCAC
CGTCTGGACGAGGTGTTCGCGGAGATTGCGGCCACGGTCAACGGTCGCAATGTGGTGTCGATTTCAATTATCGATACGCT
GGAGCATATTACAAATGGGCCGGCGTTGCTCGACCGTCTGCGCGAGTTCGCCGAGCAGCGTTCGATTCTGCTCGTGGTCA
GCGTGCCGAACGGCGGGCATCGCGATCTCGGTGCAAAGTTGCTCGCCGGGCATTGGGATTATACGGAGGTTGGCCTTCTC
GATCACACGCACGTCATTCACCATACCGACCGCTTGCTGGCGGCAATGGCCAAGCGTGCCGGCTGGCACGAAGTGGGCGC
GCGCGACTATGAGCTCGAATCCAGTGATCAGGCGTTTCCGCCGGCTCATCCGCTGTTGACCGGAAACACGGCGGCGTCAC
GCTATTTGCAGCAAATCCGTCGTGCTTCGGATGCTTTCGGAACAGTGAACGAACTGGTGCGGGCGTACTTGCCGGGCGCG
CGTCATGACGTTCCCCTGTTCGCCGATCCGAAAGAGGCGCGGCCGTTTCTGTCAATCGTCACGCGTACGCAAGCCAAGCG
GCTTGGCAATCTGCGCGATGTCCTGCTTTGTCTCACCGCCCAGACTTGTCAGGACTTCGAAATCCTCGTCGTGACGCACA
AGGTGGATGGGGAGCCGTACTATGCCGTCAGGCGGATCGTCGAAGATCTGCCGGAGTCGATTCGTAATCGTGCGCGTGTG
CTTCGCTGCGATCGGGGTGGACGTACCGCGCCGCTGAATGACGGTTTTGCCGCGGCGAGAGGGCATTACGTTGCGATTCT
GGACGACGATGAACTGGTTTTCGCGCACTGGGTCGAGACGTTCAAGAAGTTGAGCGAGAAGGCGGCCGGCTGTGTGTTGC
GCGCGACGGCTGCCGAGCAAGACATCGTGTCGACGGGAGCCCGGCCGGATGGCGCGCTCGGATATCGGACCGTTTCGGCG
ATCACGACGCCGTATCCGGCGCACTTCGACCTTTTCGAACATCTGTCACAGAATTATTCGCCGCCTGTATCGCTCGCATT
TCCGCGCGTCGCTTTTCAAGAGCTGGGCATTCGATTCGACGAATCGCTGGATACGGCGGAGGACTGGGACTTCGAGATGC
GCACGGCCTTCGTCTGTGGCGTCGAAAGCAGCCCGGAAATTACCGGTATCTACCGAAAGTGGCGTTCCGGCGAATCGTCG
TTTTCGATCCATTCGCAGGACGAATGGCGACGCGATTACGAAAAGATCGTGGCGAAGCACAACGATCAGTATCACGTGTT
TCCTCCGGGCACGATCAAGCTCATCGTTGATCAGCGCAACTGGATCAAGAAGCTCGAGCACGATATCGCCGTGCTGCAGG
GCGCGGCAAAACTCGATCCGTTGCGCCGGTTCTTTGTCAGGCATCCGCGTCTGTACCGGATCGTGCGGATGACCTACGAC
AATTCGAAGATCGTCGCTCGGAGAATCGTTCGGCGCTTGGGGTGA

Upstream 100 bases:

>100_bases
GGATCTCAAGGACGCCGGGAAACTGCCCGCCCAGATCGATCCCGGGCATCGCGTGGCGCAATTCATCGATGGCTTCTACG
CGAAACACCGCTTCTAAACT

Downstream 100 bases:

>100_bases
TTCGTCGATGCCGGCGGATGCGTGTCGTGTGTCACGAAGGCAGGAATAGAGATGCGGTTTGATATATCCGTCGTGGTGTA
TCGAGAGACGGAGGAAACCC

Product: putative glycosyl transferase WbiD

Products: NA

Alternate protein names: O-Antigen Biosynthesis Protein

Number of amino acids: Translated: 574; Mature: 574

Protein sequence:

>574_residues
MNSATYQFHYHEYSVYSNVVGLITEFGARDGVHLDIGCGYGAIAEPVRDLGLTYIGFDADEDSLRDLRSRGFEAKRIDLH
RLDEVFAEIAATVNGRNVVSISIIDTLEHITNGPALLDRLREFAEQRSILLVVSVPNGGHRDLGAKLLAGHWDYTEVGLL
DHTHVIHHTDRLLAAMAKRAGWHEVGARDYELESSDQAFPPAHPLLTGNTAASRYLQQIRRASDAFGTVNELVRAYLPGA
RHDVPLFADPKEARPFLSIVTRTQAKRLGNLRDVLLCLTAQTCQDFEILVVTHKVDGEPYYAVRRIVEDLPESIRNRARV
LRCDRGGRTAPLNDGFAAARGHYVAILDDDELVFAHWVETFKKLSEKAAGCVLRATAAEQDIVSTGARPDGALGYRTVSA
ITTPYPAHFDLFEHLSQNYSPPVSLAFPRVAFQELGIRFDESLDTAEDWDFEMRTAFVCGVESSPEITGIYRKWRSGESS
FSIHSQDEWRRDYEKIVAKHNDQYHVFPPGTIKLIVDQRNWIKKLEHDIAVLQGAAKLDPLRRFFVRHPRLYRIVRMTYD
NSKIVARRIVRRLG

Sequences:

>Translated_574_residues
MNSATYQFHYHEYSVYSNVVGLITEFGARDGVHLDIGCGYGAIAEPVRDLGLTYIGFDADEDSLRDLRSRGFEAKRIDLH
RLDEVFAEIAATVNGRNVVSISIIDTLEHITNGPALLDRLREFAEQRSILLVVSVPNGGHRDLGAKLLAGHWDYTEVGLL
DHTHVIHHTDRLLAAMAKRAGWHEVGARDYELESSDQAFPPAHPLLTGNTAASRYLQQIRRASDAFGTVNELVRAYLPGA
RHDVPLFADPKEARPFLSIVTRTQAKRLGNLRDVLLCLTAQTCQDFEILVVTHKVDGEPYYAVRRIVEDLPESIRNRARV
LRCDRGGRTAPLNDGFAAARGHYVAILDDDELVFAHWVETFKKLSEKAAGCVLRATAAEQDIVSTGARPDGALGYRTVSA
ITTPYPAHFDLFEHLSQNYSPPVSLAFPRVAFQELGIRFDESLDTAEDWDFEMRTAFVCGVESSPEITGIYRKWRSGESS
FSIHSQDEWRRDYEKIVAKHNDQYHVFPPGTIKLIVDQRNWIKKLEHDIAVLQGAAKLDPLRRFFVRHPRLYRIVRMTYD
NSKIVARRIVRRLG
>Mature_574_residues
MNSATYQFHYHEYSVYSNVVGLITEFGARDGVHLDIGCGYGAIAEPVRDLGLTYIGFDADEDSLRDLRSRGFEAKRIDLH
RLDEVFAEIAATVNGRNVVSISIIDTLEHITNGPALLDRLREFAEQRSILLVVSVPNGGHRDLGAKLLAGHWDYTEVGLL
DHTHVIHHTDRLLAAMAKRAGWHEVGARDYELESSDQAFPPAHPLLTGNTAASRYLQQIRRASDAFGTVNELVRAYLPGA
RHDVPLFADPKEARPFLSIVTRTQAKRLGNLRDVLLCLTAQTCQDFEILVVTHKVDGEPYYAVRRIVEDLPESIRNRARV
LRCDRGGRTAPLNDGFAAARGHYVAILDDDELVFAHWVETFKKLSEKAAGCVLRATAAEQDIVSTGARPDGALGYRTVSA
ITTPYPAHFDLFEHLSQNYSPPVSLAFPRVAFQELGIRFDESLDTAEDWDFEMRTAFVCGVESSPEITGIYRKWRSGESS
FSIHSQDEWRRDYEKIVAKHNDQYHVFPPGTIKLIVDQRNWIKKLEHDIAVLQGAAKLDPLRRFFVRHPRLYRIVRMTYD
NSKIVARRIVRRLG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 64808; Mature: 64808

Theoretical pI: Translated: 6.88; Mature: 6.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNSATYQFHYHEYSVYSNVVGLITEFGARDGVHLDIGCGYGAIAEPVRDLGLTYIGFDAD
CCCCEEEEEEEHHHHHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHCCCEEEECCCC
EDSLRDLRSRGFEAKRIDLHRLDEVFAEIAATVNGRNVVSISIIDTLEHITNGPALLDRL
HHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHCCCHHHHHHH
REFAEQRSILLVVSVPNGGHRDLGAKLLAGHWDYTEVGLLDHTHVIHHTDRLLAAMAKRA
HHHHHCCCEEEEEECCCCCCCCCCHHHHCCCCCCCEECCCCCHHHHHHHHHHHHHHHHHC
GWHEVGARDYELESSDQAFPPAHPLLTGNTAASRYLQQIRRASDAFGTVNELVRAYLPGA
CCHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
RHDVPLFADPKEARPFLSIVTRTQAKRLGNLRDVLLCLTAQTCQDFEILVVTHKVDGEPY
CCCCCCCCCCHHCCHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCEEEEEEEEECCCCHH
YAVRRIVEDLPESIRNRARVLRCDRGGRTAPLNDGFAAARGHYVAILDDDELVFAHWVET
HHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCCCCCHHCCCCEEEEECCCCCHHHHHHHH
FKKLSEKAAGCVLRATAAEQDIVSTGARPDGALGYRTVSAITTPYPAHFDLFEHLSQNYS
HHHHHHHHHCEEEEEHHHHHHHHHCCCCCCCCCCCEEHHHHCCCCCCHHHHHHHHHHCCC
PPVSLAFPRVAFQELGIRFDESLDTAEDWDFEMRTAFVCGVESSPEITGIYRKWRSGESS
CCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCHHHHHHHHCCCCCC
FSIHSQDEWRRDYEKIVAKHNDQYHVFPPGTIKLIVDQRNWIKKLEHDIAVLQGAAKLDP
EEECCHHHHHHHHHHHHHCCCCCEEEECCCEEEEEECCHHHHHHHHHHHHHHHCHHHHHH
LRRFFVRHPRLYRIVRMTYDNSKIVARRIVRRLG
HHHHHHCCCHHEEEEEEEECCHHHHHHHHHHHCC
>Mature Secondary Structure
MNSATYQFHYHEYSVYSNVVGLITEFGARDGVHLDIGCGYGAIAEPVRDLGLTYIGFDAD
CCCCEEEEEEEHHHHHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHCCCEEEECCCC
EDSLRDLRSRGFEAKRIDLHRLDEVFAEIAATVNGRNVVSISIIDTLEHITNGPALLDRL
HHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHCCCHHHHHHH
REFAEQRSILLVVSVPNGGHRDLGAKLLAGHWDYTEVGLLDHTHVIHHTDRLLAAMAKRA
HHHHHCCCEEEEEECCCCCCCCCCHHHHCCCCCCCEECCCCCHHHHHHHHHHHHHHHHHC
GWHEVGARDYELESSDQAFPPAHPLLTGNTAASRYLQQIRRASDAFGTVNELVRAYLPGA
CCHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
RHDVPLFADPKEARPFLSIVTRTQAKRLGNLRDVLLCLTAQTCQDFEILVVTHKVDGEPY
CCCCCCCCCCHHCCHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCEEEEEEEEECCCCHH
YAVRRIVEDLPESIRNRARVLRCDRGGRTAPLNDGFAAARGHYVAILDDDELVFAHWVET
HHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCCCCCHHCCCCEEEEECCCCCHHHHHHHH
FKKLSEKAAGCVLRATAAEQDIVSTGARPDGALGYRTVSAITTPYPAHFDLFEHLSQNYS
HHHHHHHHHCEEEEEHHHHHHHHHCCCCCCCCCCCEEHHHHCCCCCCHHHHHHHHHHCCC
PPVSLAFPRVAFQELGIRFDESLDTAEDWDFEMRTAFVCGVESSPEITGIYRKWRSGESS
CCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCHHHHHHHHCCCCCC
FSIHSQDEWRRDYEKIVAKHNDQYHVFPPGTIKLIVDQRNWIKKLEHDIAVLQGAAKLDP
EEECCHHHHHHHHHHHHHCCCCCEEEECCCEEEEEECCHHHHHHHHHHHHHHHCHHHHHH
LRRFFVRHPRLYRIVRMTYDNSKIVARRIVRRLG
HHHHHHCCCHHEEEEEEEECCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA