| Definition | Burkholderia pseudomallei MSHR346 chromosome I, complete genome. |
|---|---|
| Accession | NC_012695 |
| Length | 4,098,576 |
Click here to switch to the map view.
The map label for this gene is 237813489
Identifier: 237813489
GI number: 237813489
Start: 3151719
End: 3152555
Strand: Direct
Name: 237813489
Synonym: GBP346_A3265
Alternate gene names: NA
Gene position: 3151719-3152555 (Clockwise)
Preceding gene: 237813488
Following gene: 237813490
Centisome position: 76.9
GC content: 69.53
Gene sequence:
>837_bases ATGACGCCCACTTTCGCCCCGCCCGGCGCCGCCCGCGCGCTCGACGACGTCGCCGTGCTGATCCCCGCCTACAACGCGCA CGACGATCTGCTGCGCACGCTGATGTCGCTGCGCGAGGACGCGCCGGTGCGCGTGCTCGTCGTCGACGACGGCAGCACGC CGCCCATCGCCGCGCCCGAATTGCCCGGGCTGTCGGTCGAGGTGCTGCGAATGCCGCAAAACGGCGGGATCGAGCGCGCG CTCGCGGCCGGCATCGACGCGCTCGCCGCGCGCGGCGTGCGCTACGCGGCGCGCATCGACGCGGGCGACCTCGCCGCGCC CGGCCGGCTCGCGAAGCAGCGCGCGTACTTCGACACGCACCCGAGCGTCGCGGGCCTCGGCACGTGGACGCAGGTCGTCT CGCGCGACGGCCGGCCGCTCTTCATGCTGACGCCGAGCGCCGATCCGGCGACGCTGCGCCGCACGCGCTTCCTGCGTTCG CCGTTCGTTCATCCTTCGATGATGCTCGACATCGCGGCGGTGAAGGAAGTCGGCAACTATCGGATCAAATATCGCGCGGC GGAAGACCTCGATCTTTTTTTACGGTTAATGGAACGCTACGATTGCGCGAACCTGCCGGAGCTCGGCTTGTATTACGAAT TGAACGAGGGCGGCATCAGCGCGACGAAGCGGCGGCGGCAGATCGCGTCGACGCTCGCGCTCGCGCTGCGCTACTTCGAT CCGCTCAATCCGTGCGATTGGCTCGGCGTCGCGAAAAACCTGCTGCATTTCGTCACGCCGTACTCGACGCTGCAGCGCGC GAAGCGCCTGCTGTTCGCGCGGCGCGGCGCGGCATGA
Upstream 100 bases:
>100_bases TTCCCGCGCTCGGCCTCTACGGCGCGCTCGCGGGCCTCGCCGCCGGCTATCTCGCCGCCGCGGCGGTCAATTTCCACTAC ATTCGCCTGAAGCTGCGCCC
Downstream 100 bases:
>100_bases CGCGCCCCGTCACGTTCGCGCGCATCCGATGATTTTTTTCCAGTCCGACATGAGTTCCGCTTCCGCCCCGCGCATCGTTC TCGTCTGCAATACCGCCTGG
Product: glycosyl transferase, group 2 family
Products: NA
Alternate protein names: Glycosyl Transferase; Glycosyl Transferase Group 2 Family Protein; Glycosyltransferase; Family 2 Glycosyl Transferase; Glycosyl Transferase Family 2 Protein; Group 2 Family Glycosyl Transferase; Glycosyltransferase A Protein; Glycosyl Transferase Domain-Containing Protein
Number of amino acids: Translated: 278; Mature: 277
Protein sequence:
>278_residues MTPTFAPPGAARALDDVAVLIPAYNAHDDLLRTLMSLREDAPVRVLVVDDGSTPPIAAPELPGLSVEVLRMPQNGGIERA LAAGIDALAARGVRYAARIDAGDLAAPGRLAKQRAYFDTHPSVAGLGTWTQVVSRDGRPLFMLTPSADPATLRRTRFLRS PFVHPSMMLDIAAVKEVGNYRIKYRAAEDLDLFLRLMERYDCANLPELGLYYELNEGGISATKRRRQIASTLALALRYFD PLNPCDWLGVAKNLLHFVTPYSTLQRAKRLLFARRGAA
Sequences:
>Translated_278_residues MTPTFAPPGAARALDDVAVLIPAYNAHDDLLRTLMSLREDAPVRVLVVDDGSTPPIAAPELPGLSVEVLRMPQNGGIERA LAAGIDALAARGVRYAARIDAGDLAAPGRLAKQRAYFDTHPSVAGLGTWTQVVSRDGRPLFMLTPSADPATLRRTRFLRS PFVHPSMMLDIAAVKEVGNYRIKYRAAEDLDLFLRLMERYDCANLPELGLYYELNEGGISATKRRRQIASTLALALRYFD PLNPCDWLGVAKNLLHFVTPYSTLQRAKRLLFARRGAA >Mature_277_residues TPTFAPPGAARALDDVAVLIPAYNAHDDLLRTLMSLREDAPVRVLVVDDGSTPPIAAPELPGLSVEVLRMPQNGGIERAL AAGIDALAARGVRYAARIDAGDLAAPGRLAKQRAYFDTHPSVAGLGTWTQVVSRDGRPLFMLTPSADPATLRRTRFLRSP FVHPSMMLDIAAVKEVGNYRIKYRAAEDLDLFLRLMERYDCANLPELGLYYELNEGGISATKRRRQIASTLALALRYFDP LNPCDWLGVAKNLLHFVTPYSTLQRAKRLLFARRGAA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30523; Mature: 30391
Theoretical pI: Translated: 9.68; Mature: 9.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTPTFAPPGAARALDDVAVLIPAYNAHDDLLRTLMSLREDAPVRVLVVDDGSTPPIAAPE CCCCCCCCCHHHHHHCEEEEEECCCCHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCC LPGLSVEVLRMPQNGGIERALAAGIDALAARGVRYAARIDAGDLAAPGRLAKQRAYFDTH CCCCCEEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCHHHHHHHHHCCCC PSVAGLGTWTQVVSRDGRPLFMLTPSADPATLRRTRFLRSPFVHPSMMLDIAAVKEVGNY CCCCCCHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCE RIKYRAAEDLDLFLRLMERYDCANLPELGLYYELNEGGISATKRRRQIASTLALALRYFD EEEEECCCCHHHHHHHHHHCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHCC PLNPCDWLGVAKNLLHFVTPYSTLQRAKRLLFARRGAA CCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCC >Mature Secondary Structure TPTFAPPGAARALDDVAVLIPAYNAHDDLLRTLMSLREDAPVRVLVVDDGSTPPIAAPE CCCCCCCCHHHHHHCEEEEEECCCCHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCC LPGLSVEVLRMPQNGGIERALAAGIDALAARGVRYAARIDAGDLAAPGRLAKQRAYFDTH CCCCCEEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCHHHHHHHHHCCCC PSVAGLGTWTQVVSRDGRPLFMLTPSADPATLRRTRFLRSPFVHPSMMLDIAAVKEVGNY CCCCCCHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCE RIKYRAAEDLDLFLRLMERYDCANLPELGLYYELNEGGISATKRRRQIASTLALALRYFD EEEEECCCCHHHHHHHHHHCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHCC PLNPCDWLGVAKNLLHFVTPYSTLQRAKRLLFARRGAA CCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA