Click here to switch to the map view.

The map label for this gene is ureD

Identifier: 237813476

GI number: 237813476

Start: 3139520

End: 3140395

Strand: Direct

Name: ureD

Synonym: GBP346_A3252

Alternate gene names: 237813476

Gene position: 3139520-3140395 (Clockwise)

Preceding gene: 237813475

Following gene: 237813477

Centisome position: 76.6

GC content: 72.95

Gene sequence:

>876_bases
ATGTCCGCCCACGAACCTCACACCTCGCTCGTCCGCCCCGCCGCCAAGGCATGGCACGCCCGCCTCGAACTCGGCTTCGA
GCGGCAGCCGGGCGGACGCACGGCGCTCGCGCATCGGCGCCACGTCGGCCCGCTGCGGGTGCAGCGCGCGCTCTACCCGG
AAGGCGACGCGATCTGCCACGCGGTGATCGTGCATCCGCCGGGCGGCGTCGCGGGCGGCGACCGGCTCGAGATCGACGTG
AGGCTCGACGCCGGCACGCACGCGGTGCTGACGACGCCCGGCGCGACGAAGTGGTACAAGTCGAACGGACTCGACGCGCG
GCAGCGGATCGACATCGACGTCGGCGCGCACGCGAAGCTCGACTGGCTGCCGCAGAACAATCTGTTCTTCGACGCCGCGC
ATGCGTCGCTCGAGTTCGTGCTCGCGCTCGGCGACGGCGCGAGCGTGCTCGGCTGGGACGCGACGCAGCTCGGCCGCCAG
GCGGCGGGCGAAGCGTGGTCGGCGGGCAGCATCGCGTCGTTCTCGAAAATCGTCGGGCCGTCGGGCCGGCCGCTGTGGGT
CGAACGCGCGCGCCTCGACGCGGGTGATCCGTTGCGCGCCGCCCCGCAGGGACTCGGCGGCTTTGCCGTATACGGCACGC
TGTGGGCGCTCGGCGCGGCCTGCACGGAAGCGCTCGCCGAATCGATCGCGCCCGCGCTGCCATTCGACGATGCGCTGCGC
GCGGGCGTCACCTGCGTCGCGCCCGGCACGCTGCTGATCCGCGCGCTCGCGCATTCGATGGAGGCGCTGCAGCGGCTGTT
GGCCGAGCAATGGCTCGCGCTTCGCCCGATCGTCCACGGCGTCGACCCAAAACCGCTGCGCCTCTGGCAAACCTGA

Upstream 100 bases:

>100_bases
CGCGCATACGCGCTTTGCGTGCCTTGCGCACCTTCCGCGCCGCGCGCGGCGGCAAGCGCTATCCTGTAGCATTACCGCGC
CCGCTGCCCCGATTCGACCG

Downstream 100 bases:

>100_bases
TCGCCGCACATTCCTGACGCACGCCTGTCGGAAAAACGCGCCATCGCGGTGCGTGCCGCACCGTCGCGCGGCACGAACGC
GCGCAAACAACGCATGGCAC

Product: urease accessory protein UreD

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 291; Mature: 290

Protein sequence:

>291_residues
MSAHEPHTSLVRPAAKAWHARLELGFERQPGGRTALAHRRHVGPLRVQRALYPEGDAICHAVIVHPPGGVAGGDRLEIDV
RLDAGTHAVLTTPGATKWYKSNGLDARQRIDIDVGAHAKLDWLPQNNLFFDAAHASLEFVLALGDGASVLGWDATQLGRQ
AAGEAWSAGSIASFSKIVGPSGRPLWVERARLDAGDPLRAAPQGLGGFAVYGTLWALGAACTEALAESIAPALPFDDALR
AGVTCVAPGTLLIRALAHSMEALQRLLAEQWLALRPIVHGVDPKPLRLWQT

Sequences:

>Translated_291_residues
MSAHEPHTSLVRPAAKAWHARLELGFERQPGGRTALAHRRHVGPLRVQRALYPEGDAICHAVIVHPPGGVAGGDRLEIDV
RLDAGTHAVLTTPGATKWYKSNGLDARQRIDIDVGAHAKLDWLPQNNLFFDAAHASLEFVLALGDGASVLGWDATQLGRQ
AAGEAWSAGSIASFSKIVGPSGRPLWVERARLDAGDPLRAAPQGLGGFAVYGTLWALGAACTEALAESIAPALPFDDALR
AGVTCVAPGTLLIRALAHSMEALQRLLAEQWLALRPIVHGVDPKPLRLWQT
>Mature_290_residues
SAHEPHTSLVRPAAKAWHARLELGFERQPGGRTALAHRRHVGPLRVQRALYPEGDAICHAVIVHPPGGVAGGDRLEIDVR
LDAGTHAVLTTPGATKWYKSNGLDARQRIDIDVGAHAKLDWLPQNNLFFDAAHASLEFVLALGDGASVLGWDATQLGRQA
AGEAWSAGSIASFSKIVGPSGRPLWVERARLDAGDPLRAAPQGLGGFAVYGTLWALGAACTEALAESIAPALPFDDALRA
GVTCVAPGTLLIRALAHSMEALQRLLAEQWLALRPIVHGVDPKPLRLWQT

Specific function: Required for maturation of urease via the functional incorporation of the urease nickel metallocenter

COG id: COG0829

COG function: function code O; Urease accessory protein UreH

Gene ontology:

Cell location: Cytoplasm

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ureD family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): URED_BURM7 (A3MMU8)

Other databases:

- EMBL:   CP000548
- RefSeq:   YP_001081584.1
- GeneID:   4892698
- GenomeReviews:   CP000548_GR
- KEGG:   bmn:BMA10247_2053
- TIGR:   BMA10247_2053
- HOGENOM:   HBG711156
- OMA:   VQRPLYP
- ProtClustDB:   CLSK931036
- BioCyc:   BMAL320389:BMA10247_2053-MONOMER
- GO:   GO:0005737
- HAMAP:   MF_01384
- InterPro:   IPR002669

Pfam domain/function: PF01774 UreD

EC number: NA

Molecular weight: Translated: 30981; Mature: 30849

Theoretical pI: Translated: 7.77; Mature: 7.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
0.3 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSAHEPHTSLVRPAAKAWHARLELGFERQPGGRTALAHRRHVGPLRVQRALYPEGDAICH
CCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHCCCHHHHHHHCCCCCCCEEE
AVIVHPPGGVAGGDRLEIDVRLDAGTHAVLTTPGATKWYKSNGLDARQRIDIDVGAHAKL
EEEEECCCCCCCCCEEEEEEEECCCCEEEEECCCCCCCCCCCCCCHHHEEEEECCCCCEE
DWLPQNNLFFDAAHASLEFVLALGDGASVLGWDATQLGRQAAGEAWSAGSIASFSKIVGP
EECCCCCEEEEECCCCEEEEEEECCCCCEECCCHHHHHHHHCCCCCCCCCHHHHHHHHCC
SGRPLWVERARLDAGDPLRAAPQGLGGFAVYGTLWALGAACTEALAESIAPALPFDDALR
CCCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHH
AGVTCVAPGTLLIRALAHSMEALQRLLAEQWLALRPIVHGVDPKPLRLWQT
CCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCC
>Mature Secondary Structure 
SAHEPHTSLVRPAAKAWHARLELGFERQPGGRTALAHRRHVGPLRVQRALYPEGDAICH
CCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHCCCHHHHHHHCCCCCCCEEE
AVIVHPPGGVAGGDRLEIDVRLDAGTHAVLTTPGATKWYKSNGLDARQRIDIDVGAHAKL
EEEEECCCCCCCCCEEEEEEEECCCCEEEEECCCCCCCCCCCCCCHHHEEEEECCCCCEE
DWLPQNNLFFDAAHASLEFVLALGDGASVLGWDATQLGRQAAGEAWSAGSIASFSKIVGP
EECCCCCEEEEECCCCEEEEEEECCCCCEECCCHHHHHHHHCCCCCCCCCHHHHHHHHCC
SGRPLWVERARLDAGDPLRAAPQGLGGFAVYGTLWALGAACTEALAESIAPALPFDDALR
CCCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHH
AGVTCVAPGTLLIRALAHSMEALQRLLAEQWLALRPIVHGVDPKPLRLWQT
CCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA