Click here to switch to the map view.

The map label for this gene is tnpX [H]

Identifier: 237813456

GI number: 237813456

Start: 3121599

End: 3122648

Strand: Direct

Name: tnpX [H]

Synonym: GBP346_A3231

Alternate gene names: 237813456

Gene position: 3121599-3122648 (Clockwise)

Preceding gene: 237813449

Following gene: 237813457

Centisome position: 76.16

GC content: 48.1

Gene sequence:

>1050_bases
ATGACTCAAGTTCGCGAACTCAGTGAAATCATCACGCTACTCGCGGACGAGATCTTCACCGACCCACAAAATCGATTTTA
TCTAGTCATTGATCGACTCGATGAATCATGGGTAGACGACAGAATTCGATTCAAGCTAATTCGAGCCCTTATAGAAACCG
TTCGAGCTTTTCAGCGTGTGCGTTCAGTGAAGGCCGTGGTAGCAATACGAGAAGACCTCCTGCGCACCGTGTTCGAAGAA
ACCCGTGACGCAGGCTTCCAGGAGGAGAAATTTGAAGGGCTATTTCTGAGATTGCGATGGAGTAAAGCTCAATTAAAGCA
GATGATCGATTTGCGGATCGAGAAATTGATCAAGGAGCAGTACACTCAGCGAAAAGTTACTTTCGAGGACATTTTCCGCG
GCTCCGTTCGAGGCGAGTCCGCCATAGACTACCTTCTTAGCCGAACTCTGCTGCGTCCGCGTGATGTGATAGCTTTCGTG
AATTGCTGCATCGAACTTTGCGAAGGGAAGGAATTTGTAACACCATCAACTGTACAGGATGCGGAACGCAAATATTCGAT
CGGAAGGCTGCGCTCTCTGAAAGACGAATGGATTAGTCACTATGCATCGCTGGAGGCTTGCACCGAGATTCTGCGCGGAC
GGAATACTCACTTCAGATATTCTGAAATCACTGAAACTCATTTACAGGAATGCATCCAAGAACACTGGATTCAGATACCG
GAATCCGATCCAGTTGGATTAGCGGCGAATGAATATTTAAACAACAAGAGAAGCGCTAACTCACTCCTCATTCAAATCTT
AAAGGTCCTCTATACCACATCAATCGTTGGCGTTAAACCGGAAGCAACAGAGCGAGTAAGCTGGTCATATCTCGATGATC
GGGGCATATCGGACGGGCAATACAAAAAAAGCTCGTCTATAAACGTACATCCAATGCTCTGGCGTGCCTTAGACGTCGTA
CTTCCCGTCAGAGCTGACCGCCGCCGACACACCACAGAGGATCGACCAAGGGACGACCACAAAGGGACTAAGCAGCGATT
CAGGAGCTGA

Upstream 100 bases:

>100_bases
GACGCTAAAGCGTATGGAATAACACTCAACGCGCCTGGAGCCCAGACCCTCTCCGACGAAATAAAATCAGAGGTCTTACA
TAAGGCGCAATCCGTCGTCA

Downstream 100 bases:

>100_bases
CGAAGAATGGACTTTCGGATCAGGGCAACGTCGACGAGCAATCACGACCAACACGACAGCTCCCAGCATGAAATCCGACG
AGGAACAGTGACAGTTTTCA

Product: DNA repair ATPase

Products: NA

Alternate protein names: Transposon Tn1000 protein tnpX [H]

Number of amino acids: Translated: 349; Mature: 348

Protein sequence:

>349_residues
MTQVRELSEIITLLADEIFTDPQNRFYLVIDRLDESWVDDRIRFKLIRALIETVRAFQRVRSVKAVVAIREDLLRTVFEE
TRDAGFQEEKFEGLFLRLRWSKAQLKQMIDLRIEKLIKEQYTQRKVTFEDIFRGSVRGESAIDYLLSRTLLRPRDVIAFV
NCCIELCEGKEFVTPSTVQDAERKYSIGRLRSLKDEWISHYASLEACTEILRGRNTHFRYSEITETHLQECIQEHWIQIP
ESDPVGLAANEYLNNKRSANSLLIQILKVLYTTSIVGVKPEATERVSWSYLDDRGISDGQYKKSSSINVHPMLWRALDVV
LPVRADRRRHTTEDRPRDDHKGTKQRFRS

Sequences:

>Translated_349_residues
MTQVRELSEIITLLADEIFTDPQNRFYLVIDRLDESWVDDRIRFKLIRALIETVRAFQRVRSVKAVVAIREDLLRTVFEE
TRDAGFQEEKFEGLFLRLRWSKAQLKQMIDLRIEKLIKEQYTQRKVTFEDIFRGSVRGESAIDYLLSRTLLRPRDVIAFV
NCCIELCEGKEFVTPSTVQDAERKYSIGRLRSLKDEWISHYASLEACTEILRGRNTHFRYSEITETHLQECIQEHWIQIP
ESDPVGLAANEYLNNKRSANSLLIQILKVLYTTSIVGVKPEATERVSWSYLDDRGISDGQYKKSSSINVHPMLWRALDVV
LPVRADRRRHTTEDRPRDDHKGTKQRFRS
>Mature_348_residues
TQVRELSEIITLLADEIFTDPQNRFYLVIDRLDESWVDDRIRFKLIRALIETVRAFQRVRSVKAVVAIREDLLRTVFEET
RDAGFQEEKFEGLFLRLRWSKAQLKQMIDLRIEKLIKEQYTQRKVTFEDIFRGSVRGESAIDYLLSRTLLRPRDVIAFVN
CCIELCEGKEFVTPSTVQDAERKYSIGRLRSLKDEWISHYASLEACTEILRGRNTHFRYSEITETHLQECIQEHWIQIPE
SDPVGLAANEYLNNKRSANSLLIQILKVLYTTSIVGVKPEATERVSWSYLDDRGISDGQYKKSSSINVHPMLWRALDVVL
PVRADRRRHTTEDRPRDDHKGTKQRFRS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 41026; Mature: 40895

Theoretical pI: Translated: 8.45; Mature: 8.45

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTQVRELSEIITLLADEIFTDPQNRFYLVIDRLDESWVDDRIRFKLIRALIETVRAFQRV
CCHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHH
RSVKAVVAIREDLLRTVFEETRDAGFQEEKFEGLFLRLRWSKAQLKQMIDLRIEKLIKEQ
HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCEEEEEECCHHHHHHHHHHHHHHHHHHH
YTQRKVTFEDIFRGSVRGESAIDYLLSRTLLRPRDVIAFVNCCIELCEGKEFVTPSTVQD
HHHHCCCHHHHHHCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCHHHH
AERKYSIGRLRSLKDEWISHYASLEACTEILRGRNTHFRYSEITETHLQECIQEHWIQIP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCC
ESDPVGLAANEYLNNKRSANSLLIQILKVLYTTSIVGVKPEATERVSWSYLDDRGISDGQ
CCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCHHHHCCCCCCCCC
YKKSSSINVHPMLWRALDVVLPVRADRRRHTTEDRPRDDHKGTKQRFRS
CCCCCCCCCHHHHHHHHHHHHCCCCCHHCCCCCCCCCCCCCHHHHHCCC
>Mature Secondary Structure 
TQVRELSEIITLLADEIFTDPQNRFYLVIDRLDESWVDDRIRFKLIRALIETVRAFQRV
CHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHH
RSVKAVVAIREDLLRTVFEETRDAGFQEEKFEGLFLRLRWSKAQLKQMIDLRIEKLIKEQ
HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCEEEEEECCHHHHHHHHHHHHHHHHHHH
YTQRKVTFEDIFRGSVRGESAIDYLLSRTLLRPRDVIAFVNCCIELCEGKEFVTPSTVQD
HHHHCCCHHHHHHCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCHHHH
AERKYSIGRLRSLKDEWISHYASLEACTEILRGRNTHFRYSEITETHLQECIQEHWIQIP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCC
ESDPVGLAANEYLNNKRSANSLLIQILKVLYTTSIVGVKPEATERVSWSYLDDRGISDGQ
CCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCHHHHCCCCCCCCC
YKKSSSINVHPMLWRALDVVLPVRADRRRHTTEDRPRDDHKGTKQRFRS
CCCCCCCCCHHHHHHHHHHHHCCCCCHHCCCCCCCCCCCCCHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7612932; 8080658 [H]