| Definition | Burkholderia pseudomallei MSHR346 chromosome I, complete genome. |
|---|---|
| Accession | NC_012695 |
| Length | 4,098,576 |
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The map label for this gene is 237813445
Identifier: 237813445
GI number: 237813445
Start: 3112825
End: 3113181
Strand: Reverse
Name: 237813445
Synonym: GBP346_A3220
Alternate gene names: NA
Gene position: 3113181-3112825 (Counterclockwise)
Preceding gene: 237813446
Following gene: 237813442
Centisome position: 75.96
GC content: 66.67
Gene sequence:
>357_bases ATGGACGGGATCTTCCTGCGTTTTTACGTACACGAGAATCACCGGCTGCACTGGAAGCCGCTTTGGGAGTGGCTGCTCGA GGAGGCGAACCGGATGGGCATCGCGGGCGGTTCCGCGTTTCGCGCGATGGCGGGGTTCGGCCAGCACCGGGTGCTGCACG AGGACCGTTTCTTCGAACTGCAAGGATCGCTCGCGATCGAGGTCGAATTCGTCGTCACGGAAGATGAGGCGAAGCGGCTC ATCGAGCGCGTGTCGCGCGAGAAGGTGCGCGCGTGCTATGCGACGATCCCGGCGCGCCTCGGCGTGATCGACAATCTCGG CGACGGCGCGCCGGGCGCCGCGCCGCCCGCGGCATAG
Upstream 100 bases:
>100_bases CCCTACACTTGATAGGTTCGTTCACGTTGACGGGGCTCGGCATGTGGACCGCGCGGGCGTGGCTCGCGCCGGCCTGAGCC GGCACCCGGGGGAGGCGGCT
Downstream 100 bases:
>100_bases CGCGGGTGCCGCCGCCGGCCGGATCAGATGCCGAACAGCGTGAGCGACACCGCCGCGCGCGTGACGATCATGATCAGCAC CTGAACGATCACGAACAGCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 118; Mature: 118
Protein sequence:
>118_residues MDGIFLRFYVHENHRLHWKPLWEWLLEEANRMGIAGGSAFRAMAGFGQHRVLHEDRFFELQGSLAIEVEFVVTEDEAKRL IERVSREKVRACYATIPARLGVIDNLGDGAPGAAPPAA
Sequences:
>Translated_118_residues MDGIFLRFYVHENHRLHWKPLWEWLLEEANRMGIAGGSAFRAMAGFGQHRVLHEDRFFELQGSLAIEVEFVVTEDEAKRL IERVSREKVRACYATIPARLGVIDNLGDGAPGAAPPAA >Mature_118_residues MDGIFLRFYVHENHRLHWKPLWEWLLEEANRMGIAGGSAFRAMAGFGQHRVLHEDRFFELQGSLAIEVEFVVTEDEAKRL IERVSREKVRACYATIPARLGVIDNLGDGAPGAAPPAA
Specific function: Unknown
COG id: COG1993
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0166 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003793 - InterPro: IPR011322 - InterPro: IPR015867 [H]
Pfam domain/function: PF02641 DUF190 [H]
EC number: NA
Molecular weight: Translated: 13301; Mature: 13301
Theoretical pI: Translated: 6.35; Mature: 6.35
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDGIFLRFYVHENHRLHWKPLWEWLLEEANRMGIAGGSAFRAMAGFGQHRVLHEDRFFEL CCCEEEEEEEECCCEEEHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCEECCCCEEEE QGSLAIEVEFVVTEDEAKRLIERVSREKVRACYATIPARLGVIDNLGDGAPGAAPPAA CCCEEEEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MDGIFLRFYVHENHRLHWKPLWEWLLEEANRMGIAGGSAFRAMAGFGQHRVLHEDRFFEL CCCEEEEEEEECCCEEEHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCEECCCCEEEE QGSLAIEVEFVVTEDEAKRLIERVSREKVRACYATIPARLGVIDNLGDGAPGAAPPAA CCCEEEEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9537320 [H]