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The map label for this gene is ycjP [C]

Identifier: 237813411

GI number: 237813411

Start: 3081971

End: 3082828

Strand: Reverse

Name: ycjP [C]

Synonym: GBP346_A3186

Alternate gene names: 237813411

Gene position: 3082828-3081971 (Counterclockwise)

Preceding gene: 237813412

Following gene: 237813410

Centisome position: 75.22

GC content: 63.17

Gene sequence:

>858_bases
ATGCAGCCTAAGATGACCCTGAGTCGGGCAGTCATTTACGCGGCGCTGATCCTGTTCGCGTTGTACTTCCTGTTTCCGAT
CTACGTGATGCTGTCGACGTCGTTCAAGGATCTCGACCAGTTGCGCACCGGCAACCTGCTGACGCCGCCGTCGAGCTGGA
CGGTCGCGCCCTGGGCGAAGGCGTGGGGCGAGGCGTGCACCGGCGTGCGTTGCGAGGGGATGAAGCCGTTCTTCTTCAAC
TCGATCAAGATGGTGATTCCGGCCGTGCTGATCTCGTCGCTGATCGGCGCGTTCAACGGCTACGTGCTCACGCACTGGCG
CTTTCGCGGCGCGGACGCGCTCTTCACGATGCTGCTCGTCGGCTGCTTCATCCCGTTCCAGGTGATCCTGCTGCCGATGG
CGCGCCTGCAGGGCTACTTCGGGATGGCCAACACGATTCCCGGCCTCGTGCTCGTGCACGTCGTGTACGGGATCGCGTTC
ACGACGATGTTCTTCCGCAACTTCTACGTGAGCGTGCCGGCCGAGCTCGTGAAGGCCGCGCGCATCGACGGCGCGGGCTT
CTTCACGATCTTCACGAAGATCCTGCTGCCGGTGTCGCTGCCGATCTTCATGGTGTGCCTGATCTGGCAGTTCACGCAGA
TCTGGAACGACTTCCTGTTCGGCATCGTGTTCTCGGGCGTCGATTCGATGCCGATCACGGTCGCGCTGAACAACCTCGTC
AACACGTCGACGGGGGTGAAGGAGTACAACGTCGACATGGCGGGCGCGATCATCGCCGCGCTGCCGACGCTGCTCGTCTA
CGTGATCGCCGGCCGCTACTTCGTGCGCGGGCTGACGGCGGGCGCGGTCAAGGGATGA

Upstream 100 bases:

>100_bases
GGGCAGCTCGGCGTCGGCGCGGCGTCGTCGGTGATGATGCTCGCCACCGTCGTGGCGGTGCTCGTGCCGCTCATGTACCT
GGAATCGAGGAGCACCCGCA

Downstream 100 bases:

>100_bases
CGTCGGCACGCACGACGCGAACACGAGCGCCGCGCGCGGCGCAACGATACGAGACACGACGCGGCGCACGCGCGCCGCAA
TGAGACAGAGGATTCACAGC

Product: ABC transporter, carbohydrate uptake transporter-1 (CUT1) family, permease protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 285; Mature: 285

Protein sequence:

>285_residues
MQPKMTLSRAVIYAALILFALYFLFPIYVMLSTSFKDLDQLRTGNLLTPPSSWTVAPWAKAWGEACTGVRCEGMKPFFFN
SIKMVIPAVLISSLIGAFNGYVLTHWRFRGADALFTMLLVGCFIPFQVILLPMARLQGYFGMANTIPGLVLVHVVYGIAF
TTMFFRNFYVSVPAELVKAARIDGAGFFTIFTKILLPVSLPIFMVCLIWQFTQIWNDFLFGIVFSGVDSMPITVALNNLV
NTSTGVKEYNVDMAGAIIAALPTLLVYVIAGRYFVRGLTAGAVKG

Sequences:

>Translated_285_residues
MQPKMTLSRAVIYAALILFALYFLFPIYVMLSTSFKDLDQLRTGNLLTPPSSWTVAPWAKAWGEACTGVRCEGMKPFFFN
SIKMVIPAVLISSLIGAFNGYVLTHWRFRGADALFTMLLVGCFIPFQVILLPMARLQGYFGMANTIPGLVLVHVVYGIAF
TTMFFRNFYVSVPAELVKAARIDGAGFFTIFTKILLPVSLPIFMVCLIWQFTQIWNDFLFGIVFSGVDSMPITVALNNLV
NTSTGVKEYNVDMAGAIIAALPTLLVYVIAGRYFVRGLTAGAVKG
>Mature_285_residues
MQPKMTLSRAVIYAALILFALYFLFPIYVMLSTSFKDLDQLRTGNLLTPPSSWTVAPWAKAWGEACTGVRCEGMKPFFFN
SIKMVIPAVLISSLIGAFNGYVLTHWRFRGADALFTMLLVGCFIPFQVILLPMARLQGYFGMANTIPGLVLVHVVYGIAF
TTMFFRNFYVSVPAELVKAARIDGAGFFTIFTKILLPVSLPIFMVCLIWQFTQIWNDFLFGIVFSGVDSMPITVALNNLV
NTSTGVKEYNVDMAGAIIAALPTLLVYVIAGRYFVRGLTAGAVKG

Specific function: Probably part of a binding-protein-dependent transport system PH1214/15/16. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG0395

COG function: function code G; ABC-type sugar transport system, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787571, Length=286, Percent_Identity=26.2237762237762, Blast_Score=100, Evalue=1e-22,
Organism=Escherichia coli, GI1789860, Length=267, Percent_Identity=24.3445692883895, Blast_Score=84, Evalue=8e-18,
Organism=Escherichia coli, GI1790464, Length=300, Percent_Identity=27.6666666666667, Blast_Score=75, Evalue=6e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 31486; Mature: 31486

Theoretical pI: Translated: 9.67; Mature: 9.67

Prosite motif: PS00070 ALDEHYDE_DEHYDR_CYS ; PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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CCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure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CCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9679194 [H]