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The map label for this gene is yggW [H]

Identifier: 237813384

GI number: 237813384

Start: 3057741

End: 3058958

Strand: Direct

Name: yggW [H]

Synonym: GBP346_A3157

Alternate gene names: 237813384

Gene position: 3057741-3058958 (Clockwise)

Preceding gene: 237813383

Following gene: 237813385

Centisome position: 74.6

GC content: 68.47

Gene sequence:

>1218_bases
ATGAGCGACGCGGCAACCAACGGCGCGCGCGTCGTCGCGACATTCGCCGCGCCCGGCCGGATCCGGCTCGCGTCGCTGCC
GCCGCTCGCGCTGTACGTGCACTTCCCGTGGTGCGTGCGCAAGTGCCCGTACTGCGACTTCAATTCGCACGAATGGAAGG
ACGGCGGCGCGCTGCCCGAGCGCGACTATCTGGACGCGCTGCGCGCCGATCTCGAGCACGCGCTGCCGCTCGTCTGGGGA
CGCCAGGTACACACGGTGTTCATCGGCGGCGGCACGCCGAGCCTGCTGTCGGCGGCGGGGCTCGACCGGCTGCTGTCCGA
CGTGCGCGCGCTGCTGCCGCTCGACGCGGACGCCGAGATCACGCTCGAGGCGAACCCCGGCACGTTCGAGGCGGCGAAGT
TCGCGCAATTCCGCGCGAGCGGCGTCAATCGCCTGTCGATCGGCATCCAGAGCTTCAACGAAGCGCATCTGAAGGCGCTC
GGGCGGATTCACGACGCCGCGCAGGCGCGCGCCGCGGTCGAGATCGCCGCGCGCACGTTCGAGAACTTCAATCTCGACCT
GATGTTCGCGCTGCCGAACCAGACGCTCGACGAATGCCGCGCGGATCTCGAAACCGCGCTCGCGTTCGCGCCGCCGCATC
TGTCGCTTTATCATCTGACGCTCGAGCCGAATACGTATTTCGCGAAGTTCCCGCCCACCGTGCCGGACGACGACGCGTCG
GCCGACATGCAGGACTGGCTGCACGAGCGCACCGCGCAGGCGGGTTACGCGCGCTACGAGGTGTCCGCTTATGCGAAGCC
GCATCGGCAGAGCAAGCACAACCTCAACTACTGGCGCTTCGGCGACTATCTGGGAATCGGCGCGGGCGCGCACACGAAGC
TGTCGTTTCCGAACCGGATCCTGCGCCAGGCACGCTACAAGCATCCGGCGACGTTCATCGAACAGGCGAAAGCGGGTACT
CCCGTGCAGGAAGAGCGGGAGGTGGGGCCGCGCGATCTGCCGTTCGAGTTCATGCTGAACGCGCTGCGGCTTGTCGACGG
CGTGCCCGCATACAGCTTCGAGGCGCGCACCGGCATGTCGCTCGCCGCGATCGGGCCTGCGCTCGCGCAAGCCGAGCAGC
GCGGCCTCCTCGTGCACGATCACACGCGCATCGCGCCGACGCCGCTCGGCCAGCGCTTCCTCAACGATCTGCAGGCGCTG
TTCCTGCGCGACGCATGA

Upstream 100 bases:

>100_bases
TCGGCGCGACGGCGGCCGAGCTCGATCCGGCCGCGAAAAACGCGGCGAGCCACCGCGCGCTCGCGCTGAAGGCGCTCGTC
GCGCGGCTCGGAGAAATTCG

Downstream 100 bases:

>100_bases
CGCCCGATCGACCGCCCCGGGCCGTAGCATGCGCAGCCCGGCGCGCGCCTGCGTGAATCGAACGCGGCGTCGCGACGATC
CGCGCGCCGTTTCGGTTACA

Product: coproporphyrinogen III oxidase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 405; Mature: 404

Protein sequence:

>405_residues
MSDAATNGARVVATFAAPGRIRLASLPPLALYVHFPWCVRKCPYCDFNSHEWKDGGALPERDYLDALRADLEHALPLVWG
RQVHTVFIGGGTPSLLSAAGLDRLLSDVRALLPLDADAEITLEANPGTFEAAKFAQFRASGVNRLSIGIQSFNEAHLKAL
GRIHDAAQARAAVEIAARTFENFNLDLMFALPNQTLDECRADLETALAFAPPHLSLYHLTLEPNTYFAKFPPTVPDDDAS
ADMQDWLHERTAQAGYARYEVSAYAKPHRQSKHNLNYWRFGDYLGIGAGAHTKLSFPNRILRQARYKHPATFIEQAKAGT
PVQEEREVGPRDLPFEFMLNALRLVDGVPAYSFEARTGMSLAAIGPALAQAEQRGLLVHDHTRIAPTPLGQRFLNDLQAL
FLRDA

Sequences:

>Translated_405_residues
MSDAATNGARVVATFAAPGRIRLASLPPLALYVHFPWCVRKCPYCDFNSHEWKDGGALPERDYLDALRADLEHALPLVWG
RQVHTVFIGGGTPSLLSAAGLDRLLSDVRALLPLDADAEITLEANPGTFEAAKFAQFRASGVNRLSIGIQSFNEAHLKAL
GRIHDAAQARAAVEIAARTFENFNLDLMFALPNQTLDECRADLETALAFAPPHLSLYHLTLEPNTYFAKFPPTVPDDDAS
ADMQDWLHERTAQAGYARYEVSAYAKPHRQSKHNLNYWRFGDYLGIGAGAHTKLSFPNRILRQARYKHPATFIEQAKAGT
PVQEEREVGPRDLPFEFMLNALRLVDGVPAYSFEARTGMSLAAIGPALAQAEQRGLLVHDHTRIAPTPLGQRFLNDLQAL
FLRDA
>Mature_404_residues
SDAATNGARVVATFAAPGRIRLASLPPLALYVHFPWCVRKCPYCDFNSHEWKDGGALPERDYLDALRADLEHALPLVWGR
QVHTVFIGGGTPSLLSAAGLDRLLSDVRALLPLDADAEITLEANPGTFEAAKFAQFRASGVNRLSIGIQSFNEAHLKALG
RIHDAAQARAAVEIAARTFENFNLDLMFALPNQTLDECRADLETALAFAPPHLSLYHLTLEPNTYFAKFPPTVPDDDASA
DMQDWLHERTAQAGYARYEVSAYAKPHRQSKHNLNYWRFGDYLGIGAGAHTKLSFPNRILRQARYKHPATFIEQAKAGTP
VQEEREVGPRDLPFEFMLNALRLVDGVPAYSFEARTGMSLAAIGPALAQAEQRGLLVHDHTRIAPTPLGQRFLNDLQALF
LRDA

Specific function: Unknown

COG id: COG0635

COG function: function code H; Coproporphyrinogen III oxidase and related Fe-S oxidoreductases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the anaerobic coproporphyrinogen-III oxidase family [H]

Homologues:

Organism=Homo sapiens, GI8922911, Length=270, Percent_Identity=39.2592592592593, Blast_Score=173, Evalue=3e-43,
Organism=Escherichia coli, GI1789325, Length=382, Percent_Identity=50.7853403141361, Blast_Score=380, Evalue=1e-107,
Organism=Escherichia coli, GI87082341, Length=281, Percent_Identity=31.3167259786477, Blast_Score=123, Evalue=2e-29,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006638
- InterPro:   IPR004559
- InterPro:   IPR010723
- InterPro:   IPR007197 [H]

Pfam domain/function: PF06969 HemN_C; PF04055 Radical_SAM [H]

EC number: NA

Molecular weight: Translated: 44746; Mature: 44615

Theoretical pI: Translated: 6.68; Mature: 6.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDAATNGARVVATFAAPGRIRLASLPPLALYVHFPWCVRKCPYCDFNSHEWKDGGALPE
CCCCCCCCCEEEEEECCCCEEEEECCCCEEEEEECHHHHHCCCCCCCCCCCCCCCCCCCC
RDYLDALRADLEHALPLVWGRQVHTVFIGGGTPSLLSAAGLDRLLSDVRALLPLDADAEI
HHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEE
TLEANPGTFEAAKFAQFRASGVNRLSIGIQSFNEAHLKALGRIHDAAQARAAVEIAARTF
EEECCCCCCHHHHHHHHHHCCCCEEEEEHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
ENFNLDLMFALPNQTLDECRADLETALAFAPPHLSLYHLTLEPNTYFAKFPPTVPDDDAS
CCCCEEEEEECCCCHHHHHHHHHHHHHHCCCCCCEEEEEEECCCEEEEECCCCCCCCCCC
ADMQDWLHERTAQAGYARYEVSAYAKPHRQSKHNLNYWRFGDYLGIGAGAHTKLSFPNRI
CHHHHHHHHHHHHCCCCEEEEHHHCCCCCCCCCCCCEEEECCEEECCCCCCCCCCCHHHH
LRQARYKHPATFIEQAKAGTPVQEEREVGPRDLPFEFMLNALRLVDGVPAYSFEARTGMS
HHHHHCCCCHHHHHHHCCCCCCHHHHCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCC
LAAIGPALAQAEQRGLLVHDHTRIAPTPLGQRFLNDLQALFLRDA
HHHHCHHHHHHHHCCEEEECCCCCCCCCHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SDAATNGARVVATFAAPGRIRLASLPPLALYVHFPWCVRKCPYCDFNSHEWKDGGALPE
CCCCCCCCEEEEEECCCCEEEEECCCCEEEEEECHHHHHCCCCCCCCCCCCCCCCCCCC
RDYLDALRADLEHALPLVWGRQVHTVFIGGGTPSLLSAAGLDRLLSDVRALLPLDADAEI
HHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEE
TLEANPGTFEAAKFAQFRASGVNRLSIGIQSFNEAHLKALGRIHDAAQARAAVEIAARTF
EEECCCCCCHHHHHHHHHHCCCCEEEEEHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
ENFNLDLMFALPNQTLDECRADLETALAFAPPHLSLYHLTLEPNTYFAKFPPTVPDDDAS
CCCCEEEEEECCCCHHHHHHHHHHHHHHCCCCCCEEEEEEECCCEEEEECCCCCCCCCCC
ADMQDWLHERTAQAGYARYEVSAYAKPHRQSKHNLNYWRFGDYLGIGAGAHTKLSFPNRI
CHHHHHHHHHHHHCCCCEEEEHHHCCCCCCCCCCCCEEEECCEEECCCCCCCCCCCHHHH
LRQARYKHPATFIEQAKAGTPVQEEREVGPRDLPFEFMLNALRLVDGVPAYSFEARTGMS
HHHHHCCCCHHHHHHHCCCCCCHHHHCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCC
LAAIGPALAQAEQRGLLVHDHTRIAPTPLGQRFLNDLQALFLRDA
HHHHCHHHHHHHHCCEEEECCCCCCCCCHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]