| Definition | Burkholderia pseudomallei MSHR346 chromosome I, complete genome. |
|---|---|
| Accession | NC_012695 |
| Length | 4,098,576 |
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The map label for this gene is 237813371
Identifier: 237813371
GI number: 237813371
Start: 3045877
End: 3046446
Strand: Direct
Name: 237813371
Synonym: GBP346_A3143
Alternate gene names: NA
Gene position: 3045877-3046446 (Clockwise)
Preceding gene: 237813370
Following gene: 237813375
Centisome position: 74.32
GC content: 72.46
Gene sequence:
>570_bases TTGGCCGCCGCCGTGCTCGGCTGCATCGTGCTGAGCGCGCCCCGCATCGCCGCCGCCGACGGCGACGATACCGCGCTCAC GAACCTCGTCGCGCTCGCGTCGCAGCGCCTCGCGCTCGCCGAACCCGTCGCCCACTGGAAGTGGCTCAACGGAAAACCGA TCTCGGATCCACCGCGCGAGGCAGCGCTCCTGGCCGACGTCGAGCAACGCGCGACGGCGAACGGCGTCGATCCCGCATAC GCCCGCGCGTTCTTCGACGACCAGATCGCGGCGAGCAAGCAAGTGCAGAACGCGCTCTTCGCGACATGGCGCGCGACGCA CGGCCCGGAAGGCCCCGCGCCCGACTTGGCGACGAGCACGCGGCCGCAGCTCGACCGCCTCACGCAATCGCTGATCGCCG CGCTCGCGCGTGTCGCCCCGCTGCGCGACGCGCCGGATTGTCCGTCACGCCTCGCGCGCAGCGTCTCGAACTGGAAGACC TTGACGCGCTACGACTCCGGCCGCAAGGACGCGCTCGGCACCGCGCTGTCGCACGTCTGCACGGCGGGCAGCACCAGCGC GGTCGGCTAG
Upstream 100 bases:
>100_bases CTGCGCAACGTCTTCGCTTATTCTTCTGTTTTTTCCATCGCCCGGCTCTCGCGTGCCGGCATCGCCATCGTCCACCATGA AACAGTCGCTTCGTGCAAGC
Downstream 100 bases:
>100_bases CGCCGGCTCGTCGCCGACGACAGGCGGGCGAGCCGGCCTTTGCGTCCGCAGCGCGGGGATGGAAGGAACGCGTTGAACGC GGGTAGCGCGCGTGGCGATT
Product: chorismate mutase
Products: NA
Alternate protein names: Chorismate Mutase Protein; Monofunctional Chorismate Mutase; Secreted Chorismate Mutase; Chorismate Mutase Protein
Number of amino acids: Translated: 189; Mature: 188
Protein sequence:
>189_residues MAAAVLGCIVLSAPRIAAADGDDTALTNLVALASQRLALAEPVAHWKWLNGKPISDPPREAALLADVEQRATANGVDPAY ARAFFDDQIAASKQVQNALFATWRATHGPEGPAPDLATSTRPQLDRLTQSLIAALARVAPLRDAPDCPSRLARSVSNWKT LTRYDSGRKDALGTALSHVCTAGSTSAVG
Sequences:
>Translated_189_residues MAAAVLGCIVLSAPRIAAADGDDTALTNLVALASQRLALAEPVAHWKWLNGKPISDPPREAALLADVEQRATANGVDPAY ARAFFDDQIAASKQVQNALFATWRATHGPEGPAPDLATSTRPQLDRLTQSLIAALARVAPLRDAPDCPSRLARSVSNWKT LTRYDSGRKDALGTALSHVCTAGSTSAVG >Mature_188_residues AAAVLGCIVLSAPRIAAADGDDTALTNLVALASQRLALAEPVAHWKWLNGKPISDPPREAALLADVEQRATANGVDPAYA RAFFDDQIAASKQVQNALFATWRATHGPEGPAPDLATSTRPQLDRLTQSLIAALARVAPLRDAPDCPSRLARSVSNWKTL TRYDSGRKDALGTALSHVCTAGSTSAVG
Specific function: Unknown
COG id: COG1605
COG function: function code E; Chorismate mutase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19818; Mature: 19687
Theoretical pI: Translated: 8.08; Mature: 8.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAAAVLGCIVLSAPRIAAADGDDTALTNLVALASQRLALAEPVAHWKWLNGKPISDPPRE CHHHHHHHHHHCCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHH AALLADVEQRATANGVDPAYARAFFDDQIAASKQVQNALFATWRATHGPEGPAPDLATST HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC RPQLDRLTQSLIAALARVAPLRDAPDCPSRLARSVSNWKTLTRYDSGRKDALGTALSHVC CHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH TAGSTSAVG HCCCCCCCC >Mature Secondary Structure AAAVLGCIVLSAPRIAAADGDDTALTNLVALASQRLALAEPVAHWKWLNGKPISDPPRE HHHHHHHHHHCCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHH AALLADVEQRATANGVDPAYARAFFDDQIAASKQVQNALFATWRATHGPEGPAPDLATST HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC RPQLDRLTQSLIAALARVAPLRDAPDCPSRLARSVSNWKTLTRYDSGRKDALGTALSHVC CHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH TAGSTSAVG HCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA