| Definition | Burkholderia pseudomallei MSHR346 chromosome I, complete genome. |
|---|---|
| Accession | NC_012695 |
| Length | 4,098,576 |
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The map label for this gene is 237813350
Identifier: 237813350
GI number: 237813350
Start: 3028182
End: 3028754
Strand: Direct
Name: 237813350
Synonym: GBP346_A3120
Alternate gene names: NA
Gene position: 3028182-3028754 (Clockwise)
Preceding gene: 237813349
Following gene: 237813353
Centisome position: 73.88
GC content: 68.41
Gene sequence:
>573_bases GTGACCGAAGCCTTCCTGATCTCGACGGGCGCCGTCGCCCTCGCCGAAATCGGCGACAAGACCCAACTGCTTTCCCTCGT CCTCGCCGCACGTTACCGCAAGCCGCTGCCGATCATCGCCGGCGTCCTCGCCGCGACCCTGATCAATCATGGCTTCGCCG GCGCGCTCGGCGAGTGGCTCGGCATCTATCTGACGCCGGCGGTGATGCGCTGGGCGCTCGCGCTCTCGTTCATCGGGATG GGCCTGTGGATTCTCGTGCCGGACAAGCTCGACGCCGACGAGGCGAACGCGAACCGCTCGCGGCTCGGCGTGTTCGGCGC GACGTTCGTCGCGTTCTTCCTCGCGGAAATGGGCGACAAGACGCAGATCGCGACCGTCGCGCTCGCCGCGCGGTTCCAGG ATTACGTGGGCGTCGTTGCCGGCACGACACTCGGCATGATGCTCGCGAACGTGCCCGCGATCCTGCTCGGCGACCGCTTC GCGCATCGGCTGCCGACGAAGCTCGTTCACGGCATCGCGGCCGTGCTGTTCATCGTGCTCGGCGCGCTCGCGTTCCTGCA CGGCGGCGCGTGA
Upstream 100 bases:
>100_bases CAGGGCCTGGCGAGACCGATGGTTCTCCGCACGCCGCAGAGGGGCCCGGCGCGCGGCGAATCGTCGCTCGCGTTCAACCT GGCCCTGGGATATCCGTTCC
Downstream 100 bases:
>100_bases CGGCGCGAAAGCCGCGGCCGGCCCGCGGCAAGACGCTCGCGCGCCGCCCATCGCGGCCGCCGGGCGACTGGCGAGCCGCT GCCGGACGGCGCTCGGACGG
Product: integral membrane protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 190; Mature: 189
Protein sequence:
>190_residues MTEAFLISTGAVALAEIGDKTQLLSLVLAARYRKPLPIIAGVLAATLINHGFAGALGEWLGIYLTPAVMRWALALSFIGM GLWILVPDKLDADEANANRSRLGVFGATFVAFFLAEMGDKTQIATVALAARFQDYVGVVAGTTLGMMLANVPAILLGDRF AHRLPTKLVHGIAAVLFIVLGALAFLHGGA
Sequences:
>Translated_190_residues MTEAFLISTGAVALAEIGDKTQLLSLVLAARYRKPLPIIAGVLAATLINHGFAGALGEWLGIYLTPAVMRWALALSFIGM GLWILVPDKLDADEANANRSRLGVFGATFVAFFLAEMGDKTQIATVALAARFQDYVGVVAGTTLGMMLANVPAILLGDRF AHRLPTKLVHGIAAVLFIVLGALAFLHGGA >Mature_189_residues TEAFLISTGAVALAEIGDKTQLLSLVLAARYRKPLPIIAGVLAATLINHGFAGALGEWLGIYLTPAVMRWALALSFIGMG LWILVPDKLDADEANANRSRLGVFGATFVAFFLAEMGDKTQIATVALAARFQDYVGVVAGTTLGMMLANVPAILLGDRFA HRLPTKLVHGIAAVLFIVLGALAFLHGGA
Specific function: Unknown
COG id: COG2119
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19973; Mature: 19842
Theoretical pI: Translated: 9.00; Mature: 9.00
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTEAFLISTGAVALAEIGDKTQLLSLVLAARYRKPLPIIAGVLAATLINHGFAGALGEWL CCCEEEEECCHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHH GIYLTPAVMRWALALSFIGMGLWILVPDKLDADEANANRSRLGVFGATFVAFFLAEMGDK HHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCC TQIATVALAARFQDYVGVVAGTTLGMMLANVPAILLGDRFAHRLPTKLVHGIAAVLFIVL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH GALAFLHGGA HHHHHHHCCC >Mature Secondary Structure TEAFLISTGAVALAEIGDKTQLLSLVLAARYRKPLPIIAGVLAATLINHGFAGALGEWL CCEEEEECCHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHH GIYLTPAVMRWALALSFIGMGLWILVPDKLDADEANANRSRLGVFGATFVAFFLAEMGDK HHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCC TQIATVALAARFQDYVGVVAGTTLGMMLANVPAILLGDRFAHRLPTKLVHGIAAVLFIVL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH GALAFLHGGA HHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA