| Definition | Burkholderia pseudomallei MSHR346 chromosome I, complete genome. |
|---|---|
| Accession | NC_012695 |
| Length | 4,098,576 |
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The map label for this gene is 237813318
Identifier: 237813318
GI number: 237813318
Start: 3000943
End: 3001548
Strand: Direct
Name: 237813318
Synonym: GBP346_A3087
Alternate gene names: NA
Gene position: 3000943-3001548 (Clockwise)
Preceding gene: 237813317
Following gene: 237813321
Centisome position: 73.22
GC content: 54.46
Gene sequence:
>606_bases ATGGCGTTGAGCCAGGTCCAGCGATCCATCGCGTCGTTACACGAGCAAGCCGCCAAGGCAGGTTTGAACGATCTACTGGA AATTTCGAGCAAGTCGCCAAACCCAGATGGCGTTGCGCTGAGCGCGTTCAACCTGAAGTTCACAACGCTTAAGTACAACC GCACCTTCTCCGTTGAAATTGCATTCCAGGCCAGCAAGGTGTTCGAACACGGCGGCCCTTACCGGGAACTGCTTGAGGTT GATTCCCGAACCGCCAAGCGTGATGTGCGCCTGAAGACGTCAGGCCGACTGCTCAAGTTCAGTTTCCTGAAGACAGAGTT CCCGCTGCGGCCGGTGACGTATTTCTACGATTGGCTTTACATCAACGCTTTGGTAAAAAATCGTCATTTATGGCCTGCAC TATCGCGTGCCGAAGGCTTCACTGACATTGTGTTCAACCCATCCAAGTCTCTGAACTGCCAAGCGTATTCGGCGGCACTG TTTGCGAGTCTCGTGCGTGCGGACAAGCTGAGCAAGGCATTGGAGTCTCCGCAATCGTTTCTTGCGGTCACGAGTGACGC TTACCGGTTGCGCGAGGAGGAACAGAGTTCGCTCTTCCGTTCGTGA
Upstream 100 bases:
>100_bases TGGAAGTGAATCGCCCGTGGCAACCCGACCTGTTTTCATACCCTGTTCGTCGACGATCGGTGTACAGGAGGTGCAAGTCG ATTTTCAGTGGTTCCCAGGC
Downstream 100 bases:
>100_bases GTCGCTCCATTGCAAAGCAACACCGTCGATGCGCTAAAGAACAGGGCATCCAGCCCCAAAAACCGTACCTATTTTATATG ATGCCGACCTGCGTAAATAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 201; Mature: 200
Protein sequence:
>201_residues MALSQVQRSIASLHEQAAKAGLNDLLEISSKSPNPDGVALSAFNLKFTTLKYNRTFSVEIAFQASKVFEHGGPYRELLEV DSRTAKRDVRLKTSGRLLKFSFLKTEFPLRPVTYFYDWLYINALVKNRHLWPALSRAEGFTDIVFNPSKSLNCQAYSAAL FASLVRADKLSKALESPQSFLAVTSDAYRLREEEQSSLFRS
Sequences:
>Translated_201_residues MALSQVQRSIASLHEQAAKAGLNDLLEISSKSPNPDGVALSAFNLKFTTLKYNRTFSVEIAFQASKVFEHGGPYRELLEV DSRTAKRDVRLKTSGRLLKFSFLKTEFPLRPVTYFYDWLYINALVKNRHLWPALSRAEGFTDIVFNPSKSLNCQAYSAAL FASLVRADKLSKALESPQSFLAVTSDAYRLREEEQSSLFRS >Mature_200_residues ALSQVQRSIASLHEQAAKAGLNDLLEISSKSPNPDGVALSAFNLKFTTLKYNRTFSVEIAFQASKVFEHGGPYRELLEVD SRTAKRDVRLKTSGRLLKFSFLKTEFPLRPVTYFYDWLYINALVKNRHLWPALSRAEGFTDIVFNPSKSLNCQAYSAALF ASLVRADKLSKALESPQSFLAVTSDAYRLREEEQSSLFRS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22695; Mature: 22564
Theoretical pI: Translated: 10.02; Mature: 10.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 1.0 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALSQVQRSIASLHEQAAKAGLNDLLEISSKSPNPDGVALSAFNLKFTTLKYNRTFSVEI CCHHHHHHHHHHHHHHHHHHCHHHHHHHCCCCCCCCCEEEEEEEEEEEEEEECCEEEEEE AFQASKVFEHGGPYRELLEVDSRTAKRDVRLKTSGRLLKFSFLKTEFPLRPVTYFYDWLY EEEHHHHHHCCCCHHHHHHHHHHHHHHCEEEECCCCEEEEEEECCCCCCCHHHHHHHHHH INALVKNRHLWPALSRAEGFTDIVFNPSKSLNCQAYSAALFASLVRADKLSKALESPQSF HHHHHHCCCCCHHHHHCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCHHHH LAVTSDAYRLREEEQSSLFRS HHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure ALSQVQRSIASLHEQAAKAGLNDLLEISSKSPNPDGVALSAFNLKFTTLKYNRTFSVEI CHHHHHHHHHHHHHHHHHHCHHHHHHHCCCCCCCCCEEEEEEEEEEEEEEECCEEEEEE AFQASKVFEHGGPYRELLEVDSRTAKRDVRLKTSGRLLKFSFLKTEFPLRPVTYFYDWLY EEEHHHHHHCCCCHHHHHHHHHHHHHHCEEEECCCCEEEEEEECCCCCCCHHHHHHHHHH INALVKNRHLWPALSRAEGFTDIVFNPSKSLNCQAYSAALFASLVRADKLSKALESPQSF HHHHHHCCCCCHHHHHCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCHHHH LAVTSDAYRLREEEQSSLFRS HHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA