| Definition | Burkholderia pseudomallei MSHR346 chromosome I, complete genome. |
|---|---|
| Accession | NC_012695 |
| Length | 4,098,576 |
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The map label for this gene is 237813316
Identifier: 237813316
GI number: 237813316
Start: 2998211
End: 2999785
Strand: Reverse
Name: 237813316
Synonym: GBP346_A3085
Alternate gene names: NA
Gene position: 2999785-2998211 (Counterclockwise)
Preceding gene: 237813319
Following gene: 237813315
Centisome position: 73.19
GC content: 51.56
Gene sequence:
>1575_bases ATGGAAACACTAACGATACGCGAGATACTTGATGCGGTTTACCGTGGGCAAATTCGAATCCCAGCCTTTCAGCGGGGCTT TGTCTGGGAGCCTGATCGCGTCGCCTTTTTGATCGATAGTATTTATAAGGGCTATCCGTTTGGCGCGTTACTCTTCTGGC GGACGAGTGAGAGACTCCAGACGGAGAACAAATTAGGACCGTTTGACCTGCCGGCTCCGCAGGCTGATTTTCCCATCGAT TACGTTCTTGATGGACAGCAACGCGTCACTTCGATATTTGGCGTATTCCAAACTGAGCTTCAGGGCGATTCCCCTACCTG GAAGGATATTTACTTCGATTTTCAGCAAATTGTCGATGTCCAAGAGACGCAGTTCTTTGCATTAGCTTCTGACGAAGTTG ATCCGAATCGGCACTTTCCGCTGCGAGCGATTTTCGACACTACAGAGTATCGTCGGCTCACGCGTTCCATGACCGACGAA CTGGCGCTTCAGATCGATCGCATGCAAACCATCTTCCGGGAGGCTCGCGTACCTGTTCAGACCTTTAGGACCGACGAGAA GGAAAAGGTCGCGATTATCTTTGAGCGGATTAATCGGCAGGGCGTACCCCTCGATACGCTCCAGTTGCTGTCTGCTTGGA CGTGGAGCGAGGATTTTCAACTCAAATCAGAGTTTGAAGACTTGATCGAGGAACTAGGTGACTACGGTTTCACTGAACTC TCCAACGACATTAGCTTATTGCTTCGCTGCACGGCGGCCATCCTCACTGGTTCGTCACGTCCTGAAAGCCTAGTGCAACT CAACGGTTCCGTGGTTCGCCAACGGTTCAGCGAAGTTGTCAACGGCATTCGAGGCGCGCTTGACTTCTTGGCGACTGAGT ATGACCTGCCTTCGATCGAAAATTTGCCCTACGAGAACTGTCTGATTCCGTTGTCGGTCTTCTTTGCTGCGCCTGGAAAT TCAGAAGTGGCGGTGAGCGATATACAGCGAATTACCCTATCTCGATGGTTCTGGAGAGCAGCGTTTTCAGGTCGCTACAG TGCTGGAGTTTTACGGCACCTAGATGCTGATATTAGCGAAGCGATAAAGTTGAAGCAGGGACAGCCATCTCAACTAGCGA ACATCCTCGTCAATGTAACGGCAGATCACTTCCTTGAAAATCGGTTTGTGATCGGAACTGTGAACACGAAGACGTTCATT GCTCTTCTTGCCCAAATGGCGCCTCTGAACTTTGTTAGCGGAACTCCGGTAGATCTTCGGCAGAAGCTTCAAAGTTATAA CCGAAAGGAATTTCACCACCTGATGCCCAAGGCTTTTCTCACGGCGTCGGGACAAGCACAACGCAGCGAAAACATTCTGG CGAATTTTTGCTTCATCGCCCGCAGTGACAATCGTGTACTTGGCGGCGACTCTCCGAGCGCGTACCGGGGGAAGATGGCT GCGAACGTCGACGATATTCTCCAGTCCCATCTGTGTCCAAACGCACTGTTCGACGATAACTACGAGGCCTTTGTAACACT CCGCGCCGCGAGCCTCGCTGCCAAGGCTCGGGAGCTTTGTGGTGCCGACGATTAG
Upstream 100 bases:
>100_bases AGGATAATATGACGTCGAACTGGCTGCGATGGATGGCTACCGCCAATCGTTTTGCCTAGGCATTTAGCCTATAAACTACC TAAATTCCTTACTATTTGTC
Downstream 100 bases:
>100_bases CGTTTCTCGCACGCTTTGGGTTATCTGGTACCACTGATGGTCATCAAAAGCGGCCGGTAACTGATCGAAGCTGACACCCG AACGTCTGATTGACGCCGTC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 524; Mature: 524
Protein sequence:
>524_residues METLTIREILDAVYRGQIRIPAFQRGFVWEPDRVAFLIDSIYKGYPFGALLFWRTSERLQTENKLGPFDLPAPQADFPID YVLDGQQRVTSIFGVFQTELQGDSPTWKDIYFDFQQIVDVQETQFFALASDEVDPNRHFPLRAIFDTTEYRRLTRSMTDE LALQIDRMQTIFREARVPVQTFRTDEKEKVAIIFERINRQGVPLDTLQLLSAWTWSEDFQLKSEFEDLIEELGDYGFTEL SNDISLLLRCTAAILTGSSRPESLVQLNGSVVRQRFSEVVNGIRGALDFLATEYDLPSIENLPYENCLIPLSVFFAAPGN SEVAVSDIQRITLSRWFWRAAFSGRYSAGVLRHLDADISEAIKLKQGQPSQLANILVNVTADHFLENRFVIGTVNTKTFI ALLAQMAPLNFVSGTPVDLRQKLQSYNRKEFHHLMPKAFLTASGQAQRSENILANFCFIARSDNRVLGGDSPSAYRGKMA ANVDDILQSHLCPNALFDDNYEAFVTLRAASLAAKARELCGADD
Sequences:
>Translated_524_residues METLTIREILDAVYRGQIRIPAFQRGFVWEPDRVAFLIDSIYKGYPFGALLFWRTSERLQTENKLGPFDLPAPQADFPID YVLDGQQRVTSIFGVFQTELQGDSPTWKDIYFDFQQIVDVQETQFFALASDEVDPNRHFPLRAIFDTTEYRRLTRSMTDE LALQIDRMQTIFREARVPVQTFRTDEKEKVAIIFERINRQGVPLDTLQLLSAWTWSEDFQLKSEFEDLIEELGDYGFTEL SNDISLLLRCTAAILTGSSRPESLVQLNGSVVRQRFSEVVNGIRGALDFLATEYDLPSIENLPYENCLIPLSVFFAAPGN SEVAVSDIQRITLSRWFWRAAFSGRYSAGVLRHLDADISEAIKLKQGQPSQLANILVNVTADHFLENRFVIGTVNTKTFI ALLAQMAPLNFVSGTPVDLRQKLQSYNRKEFHHLMPKAFLTASGQAQRSENILANFCFIARSDNRVLGGDSPSAYRGKMA ANVDDILQSHLCPNALFDDNYEAFVTLRAASLAAKARELCGADD >Mature_524_residues METLTIREILDAVYRGQIRIPAFQRGFVWEPDRVAFLIDSIYKGYPFGALLFWRTSERLQTENKLGPFDLPAPQADFPID YVLDGQQRVTSIFGVFQTELQGDSPTWKDIYFDFQQIVDVQETQFFALASDEVDPNRHFPLRAIFDTTEYRRLTRSMTDE LALQIDRMQTIFREARVPVQTFRTDEKEKVAIIFERINRQGVPLDTLQLLSAWTWSEDFQLKSEFEDLIEELGDYGFTEL SNDISLLLRCTAAILTGSSRPESLVQLNGSVVRQRFSEVVNGIRGALDFLATEYDLPSIENLPYENCLIPLSVFFAAPGN SEVAVSDIQRITLSRWFWRAAFSGRYSAGVLRHLDADISEAIKLKQGQPSQLANILVNVTADHFLENRFVIGTVNTKTFI ALLAQMAPLNFVSGTPVDLRQKLQSYNRKEFHHLMPKAFLTASGQAQRSENILANFCFIARSDNRVLGGDSPSAYRGKMA ANVDDILQSHLCPNALFDDNYEAFVTLRAASLAAKARELCGADD
Specific function: Unknown
COG id: COG3472
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR018651 - InterPro: IPR004919 [H]
Pfam domain/function: PF09854 DUF2081; PF03235 DUF262 [H]
EC number: NA
Molecular weight: Translated: 59398; Mature: 59398
Theoretical pI: Translated: 4.72; Mature: 4.72
Prosite motif: PS00037 MYB_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure METLTIREILDAVYRGQIRIPAFQRGFVWEPDRVAFLIDSIYKGYPFGALLFWRTSERLQ CCCCCHHHHHHHHHCCCEECCCCCCCCCCCCHHHHHHHHHHHCCCCCCEEEEEECHHHHH TENKLGPFDLPAPQADFPIDYVLDGQQRVTSIFGVFQTELQGDSPTWKDIYFDFQQIVDV HCCCCCCCCCCCCCCCCCCCEEECCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCH QETQFFALASDEVDPNRHFPLRAIFDTTEYRRLTRSMTDELALQIDRMQTIFREARVPVQ HHCEEEEEECCCCCCCCCCCHHEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH TFRTDEKEKVAIIFERINRQGVPLDTLQLLSAWTWSEDFQLKSEFEDLIEELGDYGFTEL HHCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCHHHH SNDISLLLRCTAAILTGSSRPESLVQLNGSVVRQRFSEVVNGIRGALDFLATEYDLPSIE HHHHHHHHHHHHHHHCCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC NLPYENCLIPLSVFFAAPGNSEVAVSDIQRITLSRWFWRAAFSGRYSAGVLRHLDADISE CCCCCCCEEEEHHEEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHH AIKLKQGQPSQLANILVNVTADHFLENRFVIGTVNTKTFIALLAQMAPLNFVSGTPVDLR HHHHCCCCHHHHHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHCCCCCCCCCCHHHH QKLQSYNRKEFHHLMPKAFLTASGQAQRSENILANFCFIARSDNRVLGGDSPSAYRGKMA HHHHHCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHEEEEEECCCEEECCCCCCHHCCCCC ANVDDILQSHLCPNALFDDNYEAFVTLRAASLAAKARELCGADD CCHHHHHHHHCCCCCCCCCCCEEEEEEHHHHHHHHHHHHCCCCC >Mature Secondary Structure METLTIREILDAVYRGQIRIPAFQRGFVWEPDRVAFLIDSIYKGYPFGALLFWRTSERLQ CCCCCHHHHHHHHHCCCEECCCCCCCCCCCCHHHHHHHHHHHCCCCCCEEEEEECHHHHH TENKLGPFDLPAPQADFPIDYVLDGQQRVTSIFGVFQTELQGDSPTWKDIYFDFQQIVDV HCCCCCCCCCCCCCCCCCCCEEECCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCH QETQFFALASDEVDPNRHFPLRAIFDTTEYRRLTRSMTDELALQIDRMQTIFREARVPVQ HHCEEEEEECCCCCCCCCCCHHEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH TFRTDEKEKVAIIFERINRQGVPLDTLQLLSAWTWSEDFQLKSEFEDLIEELGDYGFTEL HHCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCHHHH SNDISLLLRCTAAILTGSSRPESLVQLNGSVVRQRFSEVVNGIRGALDFLATEYDLPSIE HHHHHHHHHHHHHHHCCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC NLPYENCLIPLSVFFAAPGNSEVAVSDIQRITLSRWFWRAAFSGRYSAGVLRHLDADISE CCCCCCCEEEEHHEEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHH AIKLKQGQPSQLANILVNVTADHFLENRFVIGTVNTKTFIALLAQMAPLNFVSGTPVDLR HHHHCCCCHHHHHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHCCCCCCCCCCHHHH QKLQSYNRKEFHHLMPKAFLTASGQAQRSENILANFCFIARSDNRVLGGDSPSAYRGKMA HHHHHCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHEEEEEECCCEEECCCCCCHHCCCCC ANVDDILQSHLCPNALFDDNYEAFVTLRAASLAAKARELCGADD CCHHHHHHHHCCCCCCCCCCCEEEEEEHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]