| Definition | Burkholderia pseudomallei MSHR346 chromosome I, complete genome. |
|---|---|
| Accession | NC_012695 |
| Length | 4,098,576 |
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The map label for this gene is 237813293
Identifier: 237813293
GI number: 237813293
Start: 2974796
End: 2975317
Strand: Reverse
Name: 237813293
Synonym: GBP346_A3060
Alternate gene names: NA
Gene position: 2975317-2974796 (Counterclockwise)
Preceding gene: 237813294
Following gene: 237813292
Centisome position: 72.59
GC content: 64.18
Gene sequence:
>522_bases GTGACGGTGCTGTCGCAGCCGAGGTCGAAGCCAGCATGGCTGAAAGAAGGCGCCCCGCAAGGGGCGCTTTTTCTTTGGCG CGCGCCGCGCGCGTTTCGCGAAGCGCGTCAAGCGCCGCGCAAGCGATTCACGAAGCGCGAAACGCTTCCTTTACAATACG GGGCGCCCGAGGCGCTGCGAAGGGGAGTCGCTGCGCCGCCGAACAATCTCAGTCAAAGAGAGGGAGTCATGAAGTTCATC GTCTGGTTGATCCGCGTGCTGGTGTTCGTGTTGCTGCTCGTGCTTGCGTTGGCCAATACGCAAAGCGCGACGCTGAATTT CCTCGCCGGCTACAACTGGCAGGCTCCGCTGATCCTGATCGGTCTCGCGTTCTTCGGCGTCGGGCTGATCGCGGGCCTGC TGTCGGCGCTGCCCGCGATCTTCCGGATGCGGATGGAAAACGGCCGGCTCAAGCGCGACTTGCGCGCTGTGCGCGAGAAC CCGGCCGTCGTCGACCAGCCGCCGATGCCGCCCGTCATTTAA
Upstream 100 bases:
>100_bases AGAAGCACGTGCCGCACTTCAAGCCCGGCAAGGAATTGCGCGAGCGCGTCGATGGCCGCGCCGGCGAGCCGTTGAAGAAC GACGAGCCGGAAGACGCGCA
Downstream 100 bases:
>100_bases CGATGCCGACGCCGCGCACGCCGCGCGGCCCCGGTTTTTTTCGACACGTCGCATGGATCTCGATTTCTGGTGGCTGCTCG CCATTCCCGTCGCGTTCGCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 173; Mature: 172
Protein sequence:
>173_residues MTVLSQPRSKPAWLKEGAPQGALFLWRAPRAFREARQAPRKRFTKRETLPLQYGAPEALRRGVAAPPNNLSQREGVMKFI VWLIRVLVFVLLLVLALANTQSATLNFLAGYNWQAPLILIGLAFFGVGLIAGLLSALPAIFRMRMENGRLKRDLRAVREN PAVVDQPPMPPVI
Sequences:
>Translated_173_residues MTVLSQPRSKPAWLKEGAPQGALFLWRAPRAFREARQAPRKRFTKRETLPLQYGAPEALRRGVAAPPNNLSQREGVMKFI VWLIRVLVFVLLLVLALANTQSATLNFLAGYNWQAPLILIGLAFFGVGLIAGLLSALPAIFRMRMENGRLKRDLRAVREN PAVVDQPPMPPVI >Mature_172_residues TVLSQPRSKPAWLKEGAPQGALFLWRAPRAFREARQAPRKRFTKRETLPLQYGAPEALRRGVAAPPNNLSQREGVMKFIV WLIRVLVFVLLLVLALANTQSATLNFLAGYNWQAPLILIGLAFFGVGLIAGLLSALPAIFRMRMENGRLKRDLRAVRENP AVVDQPPMPPVI
Specific function: Unknown
COG id: COG5416
COG function: function code S; Uncharacterized integral membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19317; Mature: 19186
Theoretical pI: Translated: 12.22; Mature: 12.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTVLSQPRSKPAWLKEGAPQGALFLWRAPRAFREARQAPRKRFTKRETLPLQYGAPEALR CCCCCCCCCCCCHHHCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHH RGVAAPPNNLSQREGVMKFIVWLIRVLVFVLLLVLALANTQSATLNFLAGYNWQAPLILI CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCHHHHH GLAFFGVGLIAGLLSALPAIFRMRMENGRLKRDLRAVRENPAVVDQPPMPPVI HHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCCC >Mature Secondary Structure TVLSQPRSKPAWLKEGAPQGALFLWRAPRAFREARQAPRKRFTKRETLPLQYGAPEALR CCCCCCCCCCCHHHCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHH RGVAAPPNNLSQREGVMKFIVWLIRVLVFVLLLVLALANTQSATLNFLAGYNWQAPLILI CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCHHHHH GLAFFGVGLIAGLLSALPAIFRMRMENGRLKRDLRAVRENPAVVDQPPMPPVI HHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA