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The map label for this gene is mmgC [H]

Identifier: 237813278

GI number: 237813278

Start: 2957936

End: 2959726

Strand: Reverse

Name: mmgC [H]

Synonym: GBP346_A3045

Alternate gene names: 237813278

Gene position: 2959726-2957936 (Counterclockwise)

Preceding gene: 237813279

Following gene: 237813276

Centisome position: 72.21

GC content: 67.56

Gene sequence:

>1791_bases
ATGAGCTATACCGCACCCGTCAAGGACATGCTGTTCGTGATGAAGGAGCTGGCCGGCATCGACGCGGTCGCCAAGCTGCC
CGGCTATGAGGACGCCGGCTTCGACACGGCGCAGGCCGTGCTCGACGAATCGGCGAAGTTTTGCGGCGAGGTGCTCGCGC
CGCTGAACGTCGAAGGCGACAAGAACCCGAGCAGCTGGAAAGACGGCGCCGTCACGGCGACGCCCGGCTTCAAGGACGCG
TTCCGCCAGTTCGTCGAGGGCGGCTGGCAGGGGCTGCAGCATCCGACCGAATACGACGGTCAGGGCTTGCCGAAGCTGAT
CGCGACGCCGTGCATCGAAATGCTGAACGCATCGAACCTGTCGTTCGCGCTGTGTCCGCTGCTGACCGACGGCGCGATCG
AGGCGCTCCTCACGGCCGGCACCGACGAGCAGAAATCCCGCTACGTGCCGAAGCTCATTTCCGGCGAATGGACGGGCACG
ATGAACCTGACGGAGCCGCAGGCGGGCTCCGACCTGGCGCTCGTGCGCTCGCGCGCGGAGCCGCAGCCCGACGGCTCGTA
CAAGGTGTTCGGCACGAAGATCTTCATCACGTGGGGCGAACACGACATGGCGGACAACATCGTCCATCTCGTGCTCGCGC
GCACGCCGGACGCGCCCGAAGGCGTGAAGGGCATCTCGCTGTTCATCGTGCCGAAGTTCCTCGTCAACGACGACGGCAGC
CTCGGCGCGCGCAACGACGTGCACTGCGTGTCGATCGAGCACAAGCTCGGCATCAAGGCGAGCCCGACCGCGGTGCTGCA
GTACGGCGACCACGGCGGCGCGATCGGCTATCTCGTCGGCGAAGAGAACCGTGGCCTCGAGTACATGTTCATCATGATGA
ACGCGGCGCGCTTCGGCGTCGGCATGCAGGGGATCGGCGTGGCCGAGCGCGCGTACCAGAAGGCCGCCGAATTCGCGAAG
GAGCGCGTGCAGAGTCGCCCCGTCGACGGTTCGGCGAAGCAGTCGGTGACGATCATCCATCATCCGGACGTGCGCCGGAT
GCTCGCGACGATGCGCGCGCTGACGGAAGGCGCGCGCGCGCTGTCCTACGTCGCCGCCGCGCATAGCGATCACGCGCACC
GCGCGGCCGACGAAGGCGTGCGTGCGAAGCACCAGGCGATCTACGAATATCTGGTGCCGGTCGTGAAGGGCTGGAGCACG
GAGATGGTCAACGAGGTGGCGAGCCTCGGCATCCAGGTGCACGGCGGGATGGGCTTCATCGAGGAAACGGGCGCCGCGCA
GTACTACCGCGATGCGCGCATTCTCGCGATCTACGAAGGCACGACCGCGATCCAGGCGAACGACCTCGTCGGCCGGAAGA
CGGCGCGCGACGGCGGCGCGGTCGCGAAGGCGCTCATCGGCGAAATCCGGCAGACGGCTGAAGCGCTCGGCGCGCACGAC
GGCCCGGCGTTCACCGCGATGAAGACGCAACTGGAGAGCGGCGCGCGCGCGCTGTCGGCGGTGGTCGACTTCGTCGTCGC
GAACGTGAAGGGCGATCCGAACGCGGTGTTCGCCGGCAGCGTGCCGTATCTGAAGCTCGCGGGTGTCGTGCTGTGCGGCT
GGCAAATGGCGCGCGCGCTGCTCGTCGCGCAGCAGAAGCGGGCCGACGATCCGAAGTTCTACGACGCGAAGATCGCGCTC
GCGCAGTTCTACGCGGAGCACATCCTCGCGCAGGCGGGCGGGCTCGAGGCGTCGATCGTCGGCGCGAAGGGCGGGCAGGG
CGTGTTCGCGTTGACCGAAGACCAGTTCTGA

Upstream 100 bases:

>100_bases
CGGCGCGCGTCGCGTTCAGCGCACGAGCCAGTCGAACATGAACAAAGGGGCGCGGCGAGCGCCCCTTTTCACACCATAAG
CAGACTAGGAGAGGAGCACC

Downstream 100 bases:

>100_bases
GCGTCCGGTTCGGCCGCCGGAGGCCAAACGCGGAACGGCGCCCGAGGGCGCCGTTTCTTTTGGGCGGGCGAGGCGGCGGT
GGTGCGCGGGCCGCCTCGGT

Product: acyl-CoA dehydrogenase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 596; Mature: 595

Protein sequence:

>596_residues
MSYTAPVKDMLFVMKELAGIDAVAKLPGYEDAGFDTAQAVLDESAKFCGEVLAPLNVEGDKNPSSWKDGAVTATPGFKDA
FRQFVEGGWQGLQHPTEYDGQGLPKLIATPCIEMLNASNLSFALCPLLTDGAIEALLTAGTDEQKSRYVPKLISGEWTGT
MNLTEPQAGSDLALVRSRAEPQPDGSYKVFGTKIFITWGEHDMADNIVHLVLARTPDAPEGVKGISLFIVPKFLVNDDGS
LGARNDVHCVSIEHKLGIKASPTAVLQYGDHGGAIGYLVGEENRGLEYMFIMMNAARFGVGMQGIGVAERAYQKAAEFAK
ERVQSRPVDGSAKQSVTIIHHPDVRRMLATMRALTEGARALSYVAAAHSDHAHRAADEGVRAKHQAIYEYLVPVVKGWST
EMVNEVASLGIQVHGGMGFIEETGAAQYYRDARILAIYEGTTAIQANDLVGRKTARDGGAVAKALIGEIRQTAEALGAHD
GPAFTAMKTQLESGARALSAVVDFVVANVKGDPNAVFAGSVPYLKLAGVVLCGWQMARALLVAQQKRADDPKFYDAKIAL
AQFYAEHILAQAGGLEASIVGAKGGQGVFALTEDQF

Sequences:

>Translated_596_residues
MSYTAPVKDMLFVMKELAGIDAVAKLPGYEDAGFDTAQAVLDESAKFCGEVLAPLNVEGDKNPSSWKDGAVTATPGFKDA
FRQFVEGGWQGLQHPTEYDGQGLPKLIATPCIEMLNASNLSFALCPLLTDGAIEALLTAGTDEQKSRYVPKLISGEWTGT
MNLTEPQAGSDLALVRSRAEPQPDGSYKVFGTKIFITWGEHDMADNIVHLVLARTPDAPEGVKGISLFIVPKFLVNDDGS
LGARNDVHCVSIEHKLGIKASPTAVLQYGDHGGAIGYLVGEENRGLEYMFIMMNAARFGVGMQGIGVAERAYQKAAEFAK
ERVQSRPVDGSAKQSVTIIHHPDVRRMLATMRALTEGARALSYVAAAHSDHAHRAADEGVRAKHQAIYEYLVPVVKGWST
EMVNEVASLGIQVHGGMGFIEETGAAQYYRDARILAIYEGTTAIQANDLVGRKTARDGGAVAKALIGEIRQTAEALGAHD
GPAFTAMKTQLESGARALSAVVDFVVANVKGDPNAVFAGSVPYLKLAGVVLCGWQMARALLVAQQKRADDPKFYDAKIAL
AQFYAEHILAQAGGLEASIVGAKGGQGVFALTEDQF
>Mature_595_residues
SYTAPVKDMLFVMKELAGIDAVAKLPGYEDAGFDTAQAVLDESAKFCGEVLAPLNVEGDKNPSSWKDGAVTATPGFKDAF
RQFVEGGWQGLQHPTEYDGQGLPKLIATPCIEMLNASNLSFALCPLLTDGAIEALLTAGTDEQKSRYVPKLISGEWTGTM
NLTEPQAGSDLALVRSRAEPQPDGSYKVFGTKIFITWGEHDMADNIVHLVLARTPDAPEGVKGISLFIVPKFLVNDDGSL
GARNDVHCVSIEHKLGIKASPTAVLQYGDHGGAIGYLVGEENRGLEYMFIMMNAARFGVGMQGIGVAERAYQKAAEFAKE
RVQSRPVDGSAKQSVTIIHHPDVRRMLATMRALTEGARALSYVAAAHSDHAHRAADEGVRAKHQAIYEYLVPVVKGWSTE
MVNEVASLGIQVHGGMGFIEETGAAQYYRDARILAIYEGTTAIQANDLVGRKTARDGGAVAKALIGEIRQTAEALGAHDG
PAFTAMKTQLESGARALSAVVDFVVANVKGDPNAVFAGSVPYLKLAGVVLCGWQMARALLVAQQKRADDPKFYDAKIALA
QFYAEHILAQAGGLEASIVGAKGGQGVFALTEDQF

Specific function: Unknown

COG id: COG1960

COG function: function code I; Acyl-CoA dehydrogenases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the acyl-CoA dehydrogenase family [H]

Homologues:

Organism=Homo sapiens, GI4501859, Length=418, Percent_Identity=27.511961722488, Blast_Score=120, Evalue=5e-27,
Organism=Homo sapiens, GI4557235, Length=388, Percent_Identity=29.8969072164948, Blast_Score=117, Evalue=3e-26,
Organism=Homo sapiens, GI76496475, Length=388, Percent_Identity=30.1546391752577, Blast_Score=117, Evalue=3e-26,
Organism=Homo sapiens, GI4557233, Length=310, Percent_Identity=30.9677419354839, Blast_Score=112, Evalue=1e-24,
Organism=Homo sapiens, GI4501857, Length=319, Percent_Identity=28.5266457680251, Blast_Score=111, Evalue=3e-24,
Organism=Homo sapiens, GI21361497, Length=362, Percent_Identity=29.0055248618785, Blast_Score=109, Evalue=6e-24,
Organism=Homo sapiens, GI226958412, Length=423, Percent_Identity=26.7139479905437, Blast_Score=99, Evalue=1e-20,
Organism=Homo sapiens, GI226958414, Length=377, Percent_Identity=26.525198938992, Blast_Score=94, Evalue=4e-19,
Organism=Homo sapiens, GI187960098, Length=313, Percent_Identity=27.4760383386581, Blast_Score=86, Evalue=7e-17,
Organism=Homo sapiens, GI4557231, Length=313, Percent_Identity=27.4760383386581, Blast_Score=86, Evalue=9e-17,
Organism=Homo sapiens, GI7656849, Length=383, Percent_Identity=25.065274151436, Blast_Score=85, Evalue=2e-16,
Organism=Escherichia coli, GI87082384, Length=337, Percent_Identity=28.486646884273, Blast_Score=106, Evalue=4e-24,
Organism=Escherichia coli, GI87081958, Length=383, Percent_Identity=23.7597911227154, Blast_Score=67, Evalue=4e-12,
Organism=Caenorhabditis elegans, GI17508101, Length=408, Percent_Identity=27.6960784313726, Blast_Score=126, Evalue=4e-29,
Organism=Caenorhabditis elegans, GI71985184, Length=419, Percent_Identity=29.1169451073986, Blast_Score=122, Evalue=5e-28,
Organism=Caenorhabditis elegans, GI17506239, Length=414, Percent_Identity=28.5024154589372, Blast_Score=118, Evalue=8e-27,
Organism=Caenorhabditis elegans, GI17569725, Length=415, Percent_Identity=26.9879518072289, Blast_Score=111, Evalue=9e-25,
Organism=Caenorhabditis elegans, GI17534899, Length=422, Percent_Identity=27.0142180094787, Blast_Score=104, Evalue=2e-22,
Organism=Caenorhabditis elegans, GI86563383, Length=382, Percent_Identity=28.2722513089005, Blast_Score=103, Evalue=2e-22,
Organism=Caenorhabditis elegans, GI86563381, Length=382, Percent_Identity=28.2722513089005, Blast_Score=103, Evalue=2e-22,
Organism=Caenorhabditis elegans, GI17570075, Length=373, Percent_Identity=26.5415549597855, Blast_Score=100, Evalue=3e-21,
Organism=Caenorhabditis elegans, GI17538396, Length=428, Percent_Identity=25.7009345794392, Blast_Score=96, Evalue=5e-20,
Organism=Caenorhabditis elegans, GI71990804, Length=302, Percent_Identity=28.8079470198675, Blast_Score=95, Evalue=1e-19,
Organism=Caenorhabditis elegans, GI71985192, Length=304, Percent_Identity=29.9342105263158, Blast_Score=91, Evalue=1e-18,
Organism=Caenorhabditis elegans, GI17533517, Length=366, Percent_Identity=25.9562841530055, Blast_Score=90, Evalue=4e-18,
Organism=Caenorhabditis elegans, GI17551932, Length=366, Percent_Identity=25.4098360655738, Blast_Score=83, Evalue=3e-16,
Organism=Caenorhabditis elegans, GI17505929, Length=368, Percent_Identity=26.0869565217391, Blast_Score=83, Evalue=5e-16,
Organism=Caenorhabditis elegans, GI32563615, Length=238, Percent_Identity=29.4117647058824, Blast_Score=80, Evalue=3e-15,
Organism=Caenorhabditis elegans, GI17534353, Length=325, Percent_Identity=25.8461538461538, Blast_Score=71, Evalue=2e-12,
Organism=Drosophila melanogaster, GI24666513, Length=371, Percent_Identity=29.3800539083558, Blast_Score=114, Evalue=3e-25,
Organism=Drosophila melanogaster, GI281363737, Length=426, Percent_Identity=27.2300469483568, Blast_Score=114, Evalue=3e-25,
Organism=Drosophila melanogaster, GI21356377, Length=367, Percent_Identity=28.8828337874659, Blast_Score=111, Evalue=1e-24,
Organism=Drosophila melanogaster, GI21355753, Length=436, Percent_Identity=27.7522935779816, Blast_Score=99, Evalue=1e-20,
Organism=Drosophila melanogaster, GI24660351, Length=354, Percent_Identity=27.9661016949153, Blast_Score=98, Evalue=1e-20,
Organism=Drosophila melanogaster, GI24646207, Length=370, Percent_Identity=26.7567567567568, Blast_Score=94, Evalue=2e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006089
- InterPro:   IPR006092
- InterPro:   IPR006090
- InterPro:   IPR006091
- InterPro:   IPR009075
- InterPro:   IPR013786
- InterPro:   IPR009100 [H]

Pfam domain/function: PF00441 Acyl-CoA_dh_1; PF02770 Acyl-CoA_dh_M; PF02771 Acyl-CoA_dh_N [H]

EC number: NA

Molecular weight: Translated: 63628; Mature: 63497

Theoretical pI: Translated: 5.61; Mature: 5.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSYTAPVKDMLFVMKELAGIDAVAKLPGYEDAGFDTAQAVLDESAKFCGEVLAPLNVEGD
CCCCCCHHHHHHHHHHHHCCHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCC
KNPSSWKDGAVTATPGFKDAFRQFVEGGWQGLQHPTEYDGQGLPKLIATPCIEMLNASNL
CCCCCCCCCCEEECCCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCCCC
SFALCPLLTDGAIEALLTAGTDEQKSRYVPKLISGEWTGTMNLTEPQAGSDLALVRSRAE
CEEEHHHHCCHHHHHHHHCCCCHHHHCCCCHHHCCCCCCEEECCCCCCCCCHHHHHHCCC
PQPDGSYKVFGTKIFITWGEHDMADNIVHLVLARTPDAPEGVKGISLFIVPKFLVNDDGS
CCCCCCEEEEEEEEEEEECCCCHHHHHHEEHEECCCCCCCCCCCEEEEEEEEEEECCCCC
LGARNDVHCVSIEHKLGIKASPTAVLQYGDHGGAIGYLVGEENRGLEYMFIMMNAARFGV
CCCCCCEEEEEEECCCCCCCCCCEEEEECCCCCEEEEEECCCCCCCEEEEEEEHHHHHCC
GMQGIGVAERAYQKAAEFAKERVQSRPVDGSAKQSVTIIHHPDVRRMLATMRALTEGARA
CCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHH
LSYVAAAHSDHAHRAADEGVRAKHQAIYEYLVPVVKGWSTEMVNEVASLGIQVHGGMGFI
HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCEEEECCCCCH
EETGAAQYYRDARILAIYEGTTAIQANDLVGRKTARDGGAVAKALIGEIRQTAEALGAHD
HHCCCHHHHCCCEEEEEECCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCC
GPAFTAMKTQLESGARALSAVVDFVVANVKGDPNAVFAGSVPYLKLAGVVLCGWQMARAL
CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHH
LVAQQKRADDPKFYDAKIALAQFYAEHILAQAGGLEASIVGAKGGQGVFALTEDQF
HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCEEEEEECCCC
>Mature Secondary Structure 
SYTAPVKDMLFVMKELAGIDAVAKLPGYEDAGFDTAQAVLDESAKFCGEVLAPLNVEGD
CCCCCHHHHHHHHHHHHCCHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCC
KNPSSWKDGAVTATPGFKDAFRQFVEGGWQGLQHPTEYDGQGLPKLIATPCIEMLNASNL
CCCCCCCCCCEEECCCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCCCC
SFALCPLLTDGAIEALLTAGTDEQKSRYVPKLISGEWTGTMNLTEPQAGSDLALVRSRAE
CEEEHHHHCCHHHHHHHHCCCCHHHHCCCCHHHCCCCCCEEECCCCCCCCCHHHHHHCCC
PQPDGSYKVFGTKIFITWGEHDMADNIVHLVLARTPDAPEGVKGISLFIVPKFLVNDDGS
CCCCCCEEEEEEEEEEEECCCCHHHHHHEEHEECCCCCCCCCCCEEEEEEEEEEECCCCC
LGARNDVHCVSIEHKLGIKASPTAVLQYGDHGGAIGYLVGEENRGLEYMFIMMNAARFGV
CCCCCCEEEEEEECCCCCCCCCCEEEEECCCCCEEEEEECCCCCCCEEEEEEEHHHHHCC
GMQGIGVAERAYQKAAEFAKERVQSRPVDGSAKQSVTIIHHPDVRRMLATMRALTEGARA
CCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHH
LSYVAAAHSDHAHRAADEGVRAKHQAIYEYLVPVVKGWSTEMVNEVASLGIQVHGGMGFI
HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCEEEECCCCCH
EETGAAQYYRDARILAIYEGTTAIQANDLVGRKTARDGGAVAKALIGEIRQTAEALGAHD
HHCCCHHHHCCCEEEEEECCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCC
GPAFTAMKTQLESGARALSAVVDFVVANVKGDPNAVFAGSVPYLKLAGVVLCGWQMARAL
CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHH
LVAQQKRADDPKFYDAKIALAQFYAEHILAQAGGLEASIVGAKGGQGVFALTEDQF
HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCEEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8759838; 8969508; 9384377 [H]