| Definition | Burkholderia pseudomallei MSHR346 chromosome I, complete genome. |
|---|---|
| Accession | NC_012695 |
| Length | 4,098,576 |
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The map label for this gene is yncA [C]
Identifier: 237813224
GI number: 237813224
Start: 2911316
End: 2911819
Strand: Direct
Name: yncA [C]
Synonym: GBP346_A2989
Alternate gene names: 237813224
Gene position: 2911316-2911819 (Clockwise)
Preceding gene: 237813223
Following gene: 237813230
Centisome position: 71.03
GC content: 71.43
Gene sequence:
>504_bases GTGAGCGCCATCGCGGGCAACCCGATCGCGATTCGCGCGGCGGCCGCGGCCGACGTGCCCGCGATGCTCGCGCTGATGCG TGAGCTCGCCGAATTCGAGCAGCTCACGCATCTGTTCGTCGCAACCGAGGCGGATCTCGCCGACGCGCTCTTCGGCGCGC GGCCGTCCGCCGAGGCGCTCGTCGCGGTGAACGGCGGCACGCTCGTCGGCTATGCGCTCTACTTTCACAACTACTCGACG TTCGTCGGCCGTCGCGGCCTGTATCTCGAGGATCTGTACGTGCAGCCGTCGCAGCGCGGCACGGGGCTCGGCACGCGCAT GCTGCGCCGGCTCGCGGCGATCGCCGTCGAGCGCCGCTGCGGGCGCTTCGAATGGACCGTGCTCGACTGGAATCAGCCGG CGATCGATTTCTACCGGAAGATGGGCGCGGACGTGATGCCCGACTGGCGCGTCGTGCGCGTGGCGGGCGACGCGCTCGCC CGGCTCGCGGACGGCGCCGCGTAG
Upstream 100 bases:
>100_bases TCGGCTTCGTGCTGCTGTGGATCGCGTGCCACGCGTACAACTGGGTCGCATCGCGTTTCGGCGGCATCGAGATCGTGCTG TCGGACGCGCCGGAGGAGGC
Downstream 100 bases:
>100_bases CGCGCGTCGCGCGGCCGACCGGCCCACCGGCCGACCGTCGTCGCGAGCGATGCCGCTGTTGCCCGCCGCCATCGCAGCGG GCGACGCATTCGCCGATGGA
Product: acetyltransferase, gnat family
Products: NA
Alternate protein names: Acetyltransferase; Acetyltransferase GNAT Family; N-Acetyltransferase; GNAT Family Acetyltransferase; Diamine N-Acetyltransferase; GCN5-Like N-Acetyltransferase; Diamine Acetyltransferase; Acetyltransferase Protein; Acetyltransferase Family Protein; Acetyltransferase GNAT Family Protein; Histone Acetyltransferase HPA; ACETYLTRANSFERASE GCN5-Related N-Acetyltransferase; Gnat Acetyltransferase; Histone Acetyltransferase HPA2-Like Acetyltransferase; Sortase-Like Acyltransferase; Spermidine/Spermine N1-Acetyl Transferase; Gcn5-Related N-Acetyltransferase; N-Acetyltransferase Protein; GNAT-Family Acetyltransferase; LOW QUALITY PROTEIN Acetyltransferase; Argininosuccinate Synthase
Number of amino acids: Translated: 167; Mature: 166
Protein sequence:
>167_residues MSAIAGNPIAIRAAAAADVPAMLALMRELAEFEQLTHLFVATEADLADALFGARPSAEALVAVNGGTLVGYALYFHNYST FVGRRGLYLEDLYVQPSQRGTGLGTRMLRRLAAIAVERRCGRFEWTVLDWNQPAIDFYRKMGADVMPDWRVVRVAGDALA RLADGAA
Sequences:
>Translated_167_residues MSAIAGNPIAIRAAAAADVPAMLALMRELAEFEQLTHLFVATEADLADALFGARPSAEALVAVNGGTLVGYALYFHNYST FVGRRGLYLEDLYVQPSQRGTGLGTRMLRRLAAIAVERRCGRFEWTVLDWNQPAIDFYRKMGADVMPDWRVVRVAGDALA RLADGAA >Mature_166_residues SAIAGNPIAIRAAAAADVPAMLALMRELAEFEQLTHLFVATEADLADALFGARPSAEALVAVNGGTLVGYALYFHNYSTF VGRRGLYLEDLYVQPSQRGTGLGTRMLRRLAAIAVERRCGRFEWTVLDWNQPAIDFYRKMGADVMPDWRVVRVAGDALAR LADGAA
Specific function: Unknown
COG id: COG0454
COG function: function code KR; Histone acetyltransferase HPA2 and related acetyltransferases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI19424126, Length=166, Percent_Identity=37.9518072289157, Blast_Score=115, Evalue=2e-26, Organism=Homo sapiens, GI4506789, Length=166, Percent_Identity=34.3373493975904, Blast_Score=114, Evalue=5e-26, Organism=Caenorhabditis elegans, GI17559148, Length=146, Percent_Identity=32.1917808219178, Blast_Score=80, Evalue=5e-16, Organism=Drosophila melanogaster, GI24647013, Length=162, Percent_Identity=38.8888888888889, Blast_Score=101, Evalue=3e-22, Organism=Drosophila melanogaster, GI24647015, Length=129, Percent_Identity=41.0852713178295, Blast_Score=82, Evalue=2e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 2.3.1.- [C]
Molecular weight: Translated: 18176; Mature: 18045
Theoretical pI: Translated: 6.53; Mature: 6.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAIAGNPIAIRAAAAADVPAMLALMRELAEFEQLTHLFVATEADLADALFGARPSAEAL CCCCCCCCEEEEEHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCEE VAVNGGTLVGYALYFHNYSTFVGRRGLYLEDLYVQPSQRGTGLGTRMLRRLAAIAVERRC EEECCCCHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHC GRFEWTVLDWNQPAIDFYRKMGADVMPDWRVVRVAGDALARLADGAA CCEEEEEEECCCHHHHHHHHCCCCCCCCCEEEEEHHHHHHHHHCCCC >Mature Secondary Structure SAIAGNPIAIRAAAAADVPAMLALMRELAEFEQLTHLFVATEADLADALFGARPSAEAL CCCCCCCEEEEEHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCEE VAVNGGTLVGYALYFHNYSTFVGRRGLYLEDLYVQPSQRGTGLGTRMLRRLAAIAVERRC EEECCCCHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHC GRFEWTVLDWNQPAIDFYRKMGADVMPDWRVVRVAGDALARLADGAA CCEEEEEEECCCHHHHHHHHCCCCCCCCCEEEEEHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA