| Definition | Burkholderia pseudomallei MSHR346 chromosome I, complete genome. |
|---|---|
| Accession | NC_012695 |
| Length | 4,098,576 |
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The map label for this gene is 237813186
Identifier: 237813186
GI number: 237813186
Start: 2875205
End: 2876425
Strand: Direct
Name: 237813186
Synonym: GBP346_A2951
Alternate gene names: NA
Gene position: 2875205-2876425 (Clockwise)
Preceding gene: 237813182
Following gene: 237813187
Centisome position: 70.15
GC content: 72.24
Gene sequence:
>1221_bases ATGACGTCGTCCGCCCCGCTTCCCCCGCCCGTTCCCCCGCCCGCCGACACGGCGTCGCCCCTGCAAGCGGCAAGCCCGGT CGCGTGCGACATCTTCTGCGCGGTCGTCGACAACTTCGGCGACATCGGCGTGTGCTGGCGTCTCGCGCGCCAGCTCGCGC TCGAGCACGGCTGGCAGGTGCGGATCTTCGTCGACGCGCTCGCGACGTTCGCGCGCCTGCAGCCGGCCGCGTTGCCCGAC GCCGCGCGGCAGACCGTCGACGGCATCGTCGTCGAGCACTGGCGCGCGCCCGCGCACGCGGGCGACACGCTCGAGATCGC CGACATCGTGATCGAGGCGTTCGCCTGCGAACTGCCGGGCGCGTATGTCGCCGCGATGGCGCGCCGCGCGCGGCCGCCCG TCTGGATCAACCTCGAATACCTGAGCGCCGAGGACTGGGTCGGCGAATTTCATCTGCGCCCGTCGCCGCATCCGCGCTAC CCGCTCACGAAGACGTTCTTCTTCCCTGGCCTCGGGCCCGGCACGGGCGGCGTGCTGAAGGAGCGCGATCTCGACGCGCG CCGCGCCGCGTTCGAAACCGGCGGCGATGCGCGCCGCACGTGGTGGCAAAACGTCGCGGGCGCGCCGATACCCGCTCCGG ACACCACCGTCGTGTCGCTCTTCGCGTACGAGAATCCGGCGCTCGACGCGCTGCTCGAACAGTGGCGCGACGGCCGCGAG CCGGTCGCGCTGCTCGTGCCCGAAGGCAGGATCTCGGCGCGCGTCGCGCGCTTCTTCGGGGCCGGCGCGTTGGGCGCCGG CGCGCACGCGGCGCGCGGCAGCCTCGTCGCACACGGTCTCGCCTTCGTCGCGCAGCCCGACTACGACCGGCTGCTGTGGG CGAGCGACGTGAACTTCGTGCGCGGCGAGGATTCGTTCGTCCGCGCGCAATGGGCGCGCCGGCCGTTCGTCTGGCAGATC TATCCGCAGGCCGACGACGCGCATCTGCCGAAGCTCGACGCGGCGCTCGCGCATGTCACCGCACGCGTCGATCACGCGAC GCGCGCGGCGACCGAGCGCTTCTGGCACGCCTGGAACGGCGCGGGCACGCCCGATTGGACCGATTTCTGGCGGCACCGCG CGGCGCTCGCCGCGCGCGCCGCGAGTTGGGCGGACGAGCTCGCGGCCGTCGGCGACCTCGCCGGAAATCTGGCGAATTTT GCAAAAACTCAGTTAAAATAA
Upstream 100 bases:
>100_bases GCGGCGCGCCGGTTGTGCTTCGGTTGTGCTTCGGTTGCGCGCCTGTTTTTCAAGCCGATTCGCCCGCCGATCGGCGCTTC ATTCGCTTCGCCCAGACCAG
Downstream 100 bases:
>100_bases GCGGTTATCCAACGGCTGACCACGCAAGCGCGTGCGTTACCGGCGCGATGCTTCAGGATAAAAGGGGCCGCCAGGGCGGC CGCGGCCGATCGCGCCTGCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 406; Mature: 405
Protein sequence:
>406_residues MTSSAPLPPPVPPPADTASPLQAASPVACDIFCAVVDNFGDIGVCWRLARQLALEHGWQVRIFVDALATFARLQPAALPD AARQTVDGIVVEHWRAPAHAGDTLEIADIVIEAFACELPGAYVAAMARRARPPVWINLEYLSAEDWVGEFHLRPSPHPRY PLTKTFFFPGLGPGTGGVLKERDLDARRAAFETGGDARRTWWQNVAGAPIPAPDTTVVSLFAYENPALDALLEQWRDGRE PVALLVPEGRISARVARFFGAGALGAGAHAARGSLVAHGLAFVAQPDYDRLLWASDVNFVRGEDSFVRAQWARRPFVWQI YPQADDAHLPKLDAALAHVTARVDHATRAATERFWHAWNGAGTPDWTDFWRHRAALAARAASWADELAAVGDLAGNLANF AKTQLK
Sequences:
>Translated_406_residues MTSSAPLPPPVPPPADTASPLQAASPVACDIFCAVVDNFGDIGVCWRLARQLALEHGWQVRIFVDALATFARLQPAALPD AARQTVDGIVVEHWRAPAHAGDTLEIADIVIEAFACELPGAYVAAMARRARPPVWINLEYLSAEDWVGEFHLRPSPHPRY PLTKTFFFPGLGPGTGGVLKERDLDARRAAFETGGDARRTWWQNVAGAPIPAPDTTVVSLFAYENPALDALLEQWRDGRE PVALLVPEGRISARVARFFGAGALGAGAHAARGSLVAHGLAFVAQPDYDRLLWASDVNFVRGEDSFVRAQWARRPFVWQI YPQADDAHLPKLDAALAHVTARVDHATRAATERFWHAWNGAGTPDWTDFWRHRAALAARAASWADELAAVGDLAGNLANF AKTQLK >Mature_405_residues TSSAPLPPPVPPPADTASPLQAASPVACDIFCAVVDNFGDIGVCWRLARQLALEHGWQVRIFVDALATFARLQPAALPDA ARQTVDGIVVEHWRAPAHAGDTLEIADIVIEAFACELPGAYVAAMARRARPPVWINLEYLSAEDWVGEFHLRPSPHPRYP LTKTFFFPGLGPGTGGVLKERDLDARRAAFETGGDARRTWWQNVAGAPIPAPDTTVVSLFAYENPALDALLEQWRDGREP VALLVPEGRISARVARFFGAGALGAGAHAARGSLVAHGLAFVAQPDYDRLLWASDVNFVRGEDSFVRAQWARRPFVWQIY PQADDAHLPKLDAALAHVTARVDHATRAATERFWHAWNGAGTPDWTDFWRHRAALAARAASWADELAAVGDLAGNLANFA KTQLK
Specific function: Unknown
COG id: COG4394
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44168; Mature: 44037
Theoretical pI: Translated: 6.38; Mature: 6.38
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 0.2 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSSAPLPPPVPPPADTASPLQAASPVACDIFCAVVDNFGDIGVCWRLARQLALEHGWQV CCCCCCCCCCCCCCCCCCCCHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCEE RIFVDALATFARLQPAALPDAARQTVDGIVVEHWRAPAHAGDTLEIADIVIEAFACELPG EEHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCH AYVAAMARRARPPVWINLEYLSAEDWVGEFHLRPSPHPRYPLTKTFFFPGLGPGTGGVLK HHHHHHHHHCCCCEEEEEEEECCCCCCCEEECCCCCCCCCCCCCEEECCCCCCCCCCCCC ERDLDARRAAFETGGDARRTWWQNVAGAPIPAPDTTVVSLFAYENPALDALLEQWRDGRE CCCCHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHCCCC PVALLVPEGRISARVARFFGAGALGAGAHAARGSLVAHGLAFVAQPDYDRLLWASDVNFV CEEEEECCCHHHHHHHHHHCCCCCCCCCHHHHCHHHHHHHHHEECCCHHHEEEECCCCEE RGEDSFVRAQWARRPFVWQIYPQADDAHLPKLDAALAHVTARVDHATRAATERFWHAWNG CCCCHHHHHHHCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC AGTPDWTDFWRHRAALAARAASWADELAAVGDLAGNLANFAKTQLK CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure TSSAPLPPPVPPPADTASPLQAASPVACDIFCAVVDNFGDIGVCWRLARQLALEHGWQV CCCCCCCCCCCCCCCCCCCHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCEE RIFVDALATFARLQPAALPDAARQTVDGIVVEHWRAPAHAGDTLEIADIVIEAFACELPG EEHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCH AYVAAMARRARPPVWINLEYLSAEDWVGEFHLRPSPHPRYPLTKTFFFPGLGPGTGGVLK HHHHHHHHHCCCCEEEEEEEECCCCCCCEEECCCCCCCCCCCCCEEECCCCCCCCCCCCC ERDLDARRAAFETGGDARRTWWQNVAGAPIPAPDTTVVSLFAYENPALDALLEQWRDGRE CCCCHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHCCCC PVALLVPEGRISARVARFFGAGALGAGAHAARGSLVAHGLAFVAQPDYDRLLWASDVNFV CEEEEECCCHHHHHHHHHHCCCCCCCCCHHHHCHHHHHHHHHEECCCHHHEEEECCCCEE RGEDSFVRAQWARRPFVWQIYPQADDAHLPKLDAALAHVTARVDHATRAATERFWHAWNG CCCCHHHHHHHCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC AGTPDWTDFWRHRAALAARAASWADELAAVGDLAGNLANFAKTQLK CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA