| Definition | Burkholderia pseudomallei MSHR346 chromosome I, complete genome. |
|---|---|
| Accession | NC_012695 |
| Length | 4,098,576 |
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The map label for this gene is 237813168
Identifier: 237813168
GI number: 237813168
Start: 2858759
End: 2859823
Strand: Reverse
Name: 237813168
Synonym: GBP346_A2930
Alternate gene names: NA
Gene position: 2859823-2858759 (Counterclockwise)
Preceding gene: 237813170
Following gene: 237813167
Centisome position: 69.78
GC content: 66.1
Gene sequence:
>1065_bases ATGCGAATCGCTCAAATCGCTCCGTTGCACGAAGCGGTTCCCCCGAAACTGTACGGCGGTACCGAACGGGTGGTGTCCTA TCTGACCGAGGCGCTCGTCGAGATGGGACATGACGTCACGCTCTTCGCGAGCGGCGATTCGCAGACCAGCGCGAAGCTCG AGGCCGTGTGGCCGCAGGCGCTGCGCCTCGACCCGACCATCCGCGACGTGATGGCGCCGCACATGCTGCTGCTCGAGGAA GTGCGCCGCCGCGCGGACGAGTTCGACGTGCTGCACTTTCACATCGACTACTATCCGTTCCCGCTGTTCTCGCGCCAGCC GGTGCCGCATCTGACGACGCTGCACGGCCGCCTCGACCTGCCGGAGCTGCAGCCAATCTTCAACACGTTCAGCGACGTGC CCGTCGTGTCGATCTCCGACAACCAGCGCATTCCGCTGTCGCAGGCCAACTGGCTGCAGACGACCTACCACGGCCTGCCC GAGAACCTGCTCAAGCCGATCCCGGACGTGAAGCCGAGCTACCTCGCGTTCCTCGGCCGCATCTCGCCGGAAAAGCGCGT CGACACCGCGATCCGCATCGCCGAGCAGGCCGGCATGCCGATCAAGATCGCCGCGAAGCTCGACAAGGCCGATCGCGCGT ACTACGAAGAAAAGATCAAGCCGCTCTTCTCGCTGCCGCACGTCGAGTACATCGGCGAGATCAGCGAAGCCGAGAAGGCC GACTTCCTCGGCAACGCGCACGCGCTGCTGTTCCCGATCGACTGGCCGGAGCCGTTCGGCCTGGTGATGATCGAGGCGAT GGCGTGCGGCACGCCGGTGATCGCGTTCAAGCGCGGCTCGGTGCCCGAAGTGATCGAGAACGGCGTGTCGGGCTTCGTCG TCGAGGACGAGCTGTCGGCCGTCGCCGCCGTCAAGCGCCTGAACACGCTGCCGCGCGAGCGGGTGCGCGCCGCGTTCGAC GCGCGTTTCACGTCGAAGGTGATGGCGCAGAACTACGTGAAGGGTTACGAGGAGCTGCTGCGCCGCAAGCGCCGCACGGT GCTGCGCGAAGTCAACGCGGGCTGA
Upstream 100 bases:
>100_bases AGCCGGCTCGCCCGACGTCCAACCGACGTTCGCGGCGGCGTTCGGCAGGCGGGCGATCGACCCGCTGCTTTACTTTTTGC CGATTTTTTAGGAGTTACAC
Downstream 100 bases:
>100_bases AGCGCCGCGCTCTCGAGCGCCGCGTCCTGTTTTCGCGCGATGCCCCGCCCGGGCCGACCGGGCGGGGCATTTTGCATTCG GCGGCGGGTTTGGCGGGCCG
Product: glycosyl transferase, group 1 family
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 354; Mature: 354
Protein sequence:
>354_residues MRIAQIAPLHEAVPPKLYGGTERVVSYLTEALVEMGHDVTLFASGDSQTSAKLEAVWPQALRLDPTIRDVMAPHMLLLEE VRRRADEFDVLHFHIDYYPFPLFSRQPVPHLTTLHGRLDLPELQPIFNTFSDVPVVSISDNQRIPLSQANWLQTTYHGLP ENLLKPIPDVKPSYLAFLGRISPEKRVDTAIRIAEQAGMPIKIAAKLDKADRAYYEEKIKPLFSLPHVEYIGEISEAEKA DFLGNAHALLFPIDWPEPFGLVMIEAMACGTPVIAFKRGSVPEVIENGVSGFVVEDELSAVAAVKRLNTLPRERVRAAFD ARFTSKVMAQNYVKGYEELLRRKRRTVLREVNAG
Sequences:
>Translated_354_residues MRIAQIAPLHEAVPPKLYGGTERVVSYLTEALVEMGHDVTLFASGDSQTSAKLEAVWPQALRLDPTIRDVMAPHMLLLEE VRRRADEFDVLHFHIDYYPFPLFSRQPVPHLTTLHGRLDLPELQPIFNTFSDVPVVSISDNQRIPLSQANWLQTTYHGLP ENLLKPIPDVKPSYLAFLGRISPEKRVDTAIRIAEQAGMPIKIAAKLDKADRAYYEEKIKPLFSLPHVEYIGEISEAEKA DFLGNAHALLFPIDWPEPFGLVMIEAMACGTPVIAFKRGSVPEVIENGVSGFVVEDELSAVAAVKRLNTLPRERVRAAFD ARFTSKVMAQNYVKGYEELLRRKRRTVLREVNAG >Mature_354_residues MRIAQIAPLHEAVPPKLYGGTERVVSYLTEALVEMGHDVTLFASGDSQTSAKLEAVWPQALRLDPTIRDVMAPHMLLLEE VRRRADEFDVLHFHIDYYPFPLFSRQPVPHLTTLHGRLDLPELQPIFNTFSDVPVVSISDNQRIPLSQANWLQTTYHGLP ENLLKPIPDVKPSYLAFLGRISPEKRVDTAIRIAEQAGMPIKIAAKLDKADRAYYEEKIKPLFSLPHVEYIGEISEAEKA DFLGNAHALLFPIDWPEPFGLVMIEAMACGTPVIAFKRGSVPEVIENGVSGFVVEDELSAVAAVKRLNTLPRERVRAAFD ARFTSKVMAQNYVKGYEELLRRKRRTVLREVNAG
Specific function: Unknown
COG id: COG0438
COG function: function code M; Glycosyltransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyltransferase 1 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001296 [H]
Pfam domain/function: PF00534 Glycos_transf_1 [H]
EC number: NA
Molecular weight: Translated: 39841; Mature: 39841
Theoretical pI: Translated: 6.52; Mature: 6.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRIAQIAPLHEAVPPKLYGGTERVVSYLTEALVEMGHDVTLFASGDSQTSAKLEAVWPQA CCCCCCCCHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCHHHHHCHHH LRLDPTIRDVMAPHMLLLEEVRRRADEFDVLHFHIDYYPFPLFSRQPVPHLTTLHGRLDL HCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCHHHHCCCCCC PELQPIFNTFSDVPVVSISDNQRIPLSQANWLQTTYHGLPENLLKPIPDVKPSYLAFLGR CHHHHHHHHHCCCEEEEECCCCCCCCCCCHHHHHHHHCCCHHHHCCCCCCCHHHHHHHHC ISPEKRVDTAIRIAEQAGMPIKIAAKLDKADRAYYEEKIKPLFSLPHVEYIGEISEAEKA CCCHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH DFLGNAHALLFPIDWPEPFGLVMIEAMACGTPVIAFKRGSVPEVIENGVSGFVVEDELSA HHCCCCCEEEEECCCCCCHHHHHHHHHHCCCCEEEEECCCCHHHHHCCCCCEEEHHHHHH VAAVKRLNTLPRERVRAAFDARFTSKVMAQNYVKGYEELLRRKRRTVLREVNAG HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MRIAQIAPLHEAVPPKLYGGTERVVSYLTEALVEMGHDVTLFASGDSQTSAKLEAVWPQA CCCCCCCCHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCHHHHHCHHH LRLDPTIRDVMAPHMLLLEEVRRRADEFDVLHFHIDYYPFPLFSRQPVPHLTTLHGRLDL HCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCHHHHCCCCCC PELQPIFNTFSDVPVVSISDNQRIPLSQANWLQTTYHGLPENLLKPIPDVKPSYLAFLGR CHHHHHHHHHCCCEEEEECCCCCCCCCCCHHHHHHHHCCCHHHHCCCCCCCHHHHHHHHC ISPEKRVDTAIRIAEQAGMPIKIAAKLDKADRAYYEEKIKPLFSLPHVEYIGEISEAEKA CCCHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH DFLGNAHALLFPIDWPEPFGLVMIEAMACGTPVIAFKRGSVPEVIENGVSGFVVEDELSA HHCCCCCEEEEECCCCCCHHHHHHHHHHCCCCEEEEECCCCHHHHHCCCCCEEEHHHHHH VAAVKRLNTLPRERVRAAFDARFTSKVMAQNYVKGYEELLRRKRRTVLREVNAG HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]