Definition Burkholderia pseudomallei MSHR346 chromosome I, complete genome.
Accession NC_012695
Length 4,098,576

Click here to switch to the map view.

The map label for this gene is 237813168

Identifier: 237813168

GI number: 237813168

Start: 2858759

End: 2859823

Strand: Reverse

Name: 237813168

Synonym: GBP346_A2930

Alternate gene names: NA

Gene position: 2859823-2858759 (Counterclockwise)

Preceding gene: 237813170

Following gene: 237813167

Centisome position: 69.78

GC content: 66.1

Gene sequence:

>1065_bases
ATGCGAATCGCTCAAATCGCTCCGTTGCACGAAGCGGTTCCCCCGAAACTGTACGGCGGTACCGAACGGGTGGTGTCCTA
TCTGACCGAGGCGCTCGTCGAGATGGGACATGACGTCACGCTCTTCGCGAGCGGCGATTCGCAGACCAGCGCGAAGCTCG
AGGCCGTGTGGCCGCAGGCGCTGCGCCTCGACCCGACCATCCGCGACGTGATGGCGCCGCACATGCTGCTGCTCGAGGAA
GTGCGCCGCCGCGCGGACGAGTTCGACGTGCTGCACTTTCACATCGACTACTATCCGTTCCCGCTGTTCTCGCGCCAGCC
GGTGCCGCATCTGACGACGCTGCACGGCCGCCTCGACCTGCCGGAGCTGCAGCCAATCTTCAACACGTTCAGCGACGTGC
CCGTCGTGTCGATCTCCGACAACCAGCGCATTCCGCTGTCGCAGGCCAACTGGCTGCAGACGACCTACCACGGCCTGCCC
GAGAACCTGCTCAAGCCGATCCCGGACGTGAAGCCGAGCTACCTCGCGTTCCTCGGCCGCATCTCGCCGGAAAAGCGCGT
CGACACCGCGATCCGCATCGCCGAGCAGGCCGGCATGCCGATCAAGATCGCCGCGAAGCTCGACAAGGCCGATCGCGCGT
ACTACGAAGAAAAGATCAAGCCGCTCTTCTCGCTGCCGCACGTCGAGTACATCGGCGAGATCAGCGAAGCCGAGAAGGCC
GACTTCCTCGGCAACGCGCACGCGCTGCTGTTCCCGATCGACTGGCCGGAGCCGTTCGGCCTGGTGATGATCGAGGCGAT
GGCGTGCGGCACGCCGGTGATCGCGTTCAAGCGCGGCTCGGTGCCCGAAGTGATCGAGAACGGCGTGTCGGGCTTCGTCG
TCGAGGACGAGCTGTCGGCCGTCGCCGCCGTCAAGCGCCTGAACACGCTGCCGCGCGAGCGGGTGCGCGCCGCGTTCGAC
GCGCGTTTCACGTCGAAGGTGATGGCGCAGAACTACGTGAAGGGTTACGAGGAGCTGCTGCGCCGCAAGCGCCGCACGGT
GCTGCGCGAAGTCAACGCGGGCTGA

Upstream 100 bases:

>100_bases
AGCCGGCTCGCCCGACGTCCAACCGACGTTCGCGGCGGCGTTCGGCAGGCGGGCGATCGACCCGCTGCTTTACTTTTTGC
CGATTTTTTAGGAGTTACAC

Downstream 100 bases:

>100_bases
AGCGCCGCGCTCTCGAGCGCCGCGTCCTGTTTTCGCGCGATGCCCCGCCCGGGCCGACCGGGCGGGGCATTTTGCATTCG
GCGGCGGGTTTGGCGGGCCG

Product: glycosyl transferase, group 1 family

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 354; Mature: 354

Protein sequence:

>354_residues
MRIAQIAPLHEAVPPKLYGGTERVVSYLTEALVEMGHDVTLFASGDSQTSAKLEAVWPQALRLDPTIRDVMAPHMLLLEE
VRRRADEFDVLHFHIDYYPFPLFSRQPVPHLTTLHGRLDLPELQPIFNTFSDVPVVSISDNQRIPLSQANWLQTTYHGLP
ENLLKPIPDVKPSYLAFLGRISPEKRVDTAIRIAEQAGMPIKIAAKLDKADRAYYEEKIKPLFSLPHVEYIGEISEAEKA
DFLGNAHALLFPIDWPEPFGLVMIEAMACGTPVIAFKRGSVPEVIENGVSGFVVEDELSAVAAVKRLNTLPRERVRAAFD
ARFTSKVMAQNYVKGYEELLRRKRRTVLREVNAG

Sequences:

>Translated_354_residues
MRIAQIAPLHEAVPPKLYGGTERVVSYLTEALVEMGHDVTLFASGDSQTSAKLEAVWPQALRLDPTIRDVMAPHMLLLEE
VRRRADEFDVLHFHIDYYPFPLFSRQPVPHLTTLHGRLDLPELQPIFNTFSDVPVVSISDNQRIPLSQANWLQTTYHGLP
ENLLKPIPDVKPSYLAFLGRISPEKRVDTAIRIAEQAGMPIKIAAKLDKADRAYYEEKIKPLFSLPHVEYIGEISEAEKA
DFLGNAHALLFPIDWPEPFGLVMIEAMACGTPVIAFKRGSVPEVIENGVSGFVVEDELSAVAAVKRLNTLPRERVRAAFD
ARFTSKVMAQNYVKGYEELLRRKRRTVLREVNAG
>Mature_354_residues
MRIAQIAPLHEAVPPKLYGGTERVVSYLTEALVEMGHDVTLFASGDSQTSAKLEAVWPQALRLDPTIRDVMAPHMLLLEE
VRRRADEFDVLHFHIDYYPFPLFSRQPVPHLTTLHGRLDLPELQPIFNTFSDVPVVSISDNQRIPLSQANWLQTTYHGLP
ENLLKPIPDVKPSYLAFLGRISPEKRVDTAIRIAEQAGMPIKIAAKLDKADRAYYEEKIKPLFSLPHVEYIGEISEAEKA
DFLGNAHALLFPIDWPEPFGLVMIEAMACGTPVIAFKRGSVPEVIENGVSGFVVEDELSAVAAVKRLNTLPRERVRAAFD
ARFTSKVMAQNYVKGYEELLRRKRRTVLREVNAG

Specific function: Unknown

COG id: COG0438

COG function: function code M; Glycosyltransferase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 1 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001296 [H]

Pfam domain/function: PF00534 Glycos_transf_1 [H]

EC number: NA

Molecular weight: Translated: 39841; Mature: 39841

Theoretical pI: Translated: 6.52; Mature: 6.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRIAQIAPLHEAVPPKLYGGTERVVSYLTEALVEMGHDVTLFASGDSQTSAKLEAVWPQA
CCCCCCCCHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCHHHHHCHHH
LRLDPTIRDVMAPHMLLLEEVRRRADEFDVLHFHIDYYPFPLFSRQPVPHLTTLHGRLDL
HCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCHHHHCCCCCC
PELQPIFNTFSDVPVVSISDNQRIPLSQANWLQTTYHGLPENLLKPIPDVKPSYLAFLGR
CHHHHHHHHHCCCEEEEECCCCCCCCCCCHHHHHHHHCCCHHHHCCCCCCCHHHHHHHHC
ISPEKRVDTAIRIAEQAGMPIKIAAKLDKADRAYYEEKIKPLFSLPHVEYIGEISEAEKA
CCCHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
DFLGNAHALLFPIDWPEPFGLVMIEAMACGTPVIAFKRGSVPEVIENGVSGFVVEDELSA
HHCCCCCEEEEECCCCCCHHHHHHHHHHCCCCEEEEECCCCHHHHHCCCCCEEEHHHHHH
VAAVKRLNTLPRERVRAAFDARFTSKVMAQNYVKGYEELLRRKRRTVLREVNAG
HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MRIAQIAPLHEAVPPKLYGGTERVVSYLTEALVEMGHDVTLFASGDSQTSAKLEAVWPQA
CCCCCCCCHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCHHHHHCHHH
LRLDPTIRDVMAPHMLLLEEVRRRADEFDVLHFHIDYYPFPLFSRQPVPHLTTLHGRLDL
HCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCHHHHCCCCCC
PELQPIFNTFSDVPVVSISDNQRIPLSQANWLQTTYHGLPENLLKPIPDVKPSYLAFLGR
CHHHHHHHHHCCCEEEEECCCCCCCCCCCHHHHHHHHCCCHHHHCCCCCCCHHHHHHHHC
ISPEKRVDTAIRIAEQAGMPIKIAAKLDKADRAYYEEKIKPLFSLPHVEYIGEISEAEKA
CCCHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
DFLGNAHALLFPIDWPEPFGLVMIEAMACGTPVIAFKRGSVPEVIENGVSGFVVEDELSA
HHCCCCCEEEEECCCCCCHHHHHHHHHHCCCCEEEEECCCCHHHHHCCCCCEEEHHHHHH
VAAVKRLNTLPRERVRAAFDARFTSKVMAQNYVKGYEELLRRKRRTVLREVNAG
HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]