| Definition | Burkholderia pseudomallei MSHR346 chromosome I, complete genome. |
|---|---|
| Accession | NC_012695 |
| Length | 4,098,576 |
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The map label for this gene is 237813152
Identifier: 237813152
GI number: 237813152
Start: 2840326
End: 2840931
Strand: Reverse
Name: 237813152
Synonym: GBP346_A2914
Alternate gene names: NA
Gene position: 2840931-2840326 (Counterclockwise)
Preceding gene: 237813153
Following gene: 237813150
Centisome position: 69.32
GC content: 67.16
Gene sequence:
>606_bases TTGCGCGCGTGTTCGATGCCGCGCGCGAAGCCGCGCCGTTTCCCGATGACGATGTTCCGATTCCGTATCCTCCCTGCCGC GATGCTCGGCGCGGCGCTCGCGCTCGCCGGCTGCGACGACCGGCAAAGCGAGCAGACCGTGCAGCGATTCAAGGATTTCT TCAACGCGATCAAGCCCGCGCCGCTGTTCCTCAAGGGCCTCACGCCCGGCGTGACGACCGAGGCCGAGATTCGCGGCCAG ATGGGGCGGCCCGAGACGGAGCGCGTGTACACCGACGGTTCCAAGCGCCTCGAATACCCGCGCGGCCCGATGGGCAACGA AACATACATGGTCGACATCGACGCGAGCGGCCGTTTCGTCGCCGCGACGCAGGTGCTGACGGCCGCGAACTTCGCGAAGA TCCGCCCGGGCATGACGCAGGACGAGGTACGTCGCCTGCTCGGCAAGCCGACCGAGGTCGCGCGCTATCCGCTCAAGCCG GAGACGGTGTGGAGCTGGCGCTGGCTCGAGGACGGCGTCAATCAGGACGCGTTCTTCAATGTTCATTTCGGGCCGGACGG GCTCGTCTACACGACGTCGCGCTCCGACATCCTGAAGGGGCGCTGA
Upstream 100 bases:
>100_bases TGATTCTTCTCCGCGCCACGCGCTGCGTTCCACGCATCGGGCATCGGGCGCTGCGCCTCGAGCCGCGTTTTCCGCGTGCC ACGGCCGCGGTGCGGTATGC
Downstream 100 bases:
>100_bases GCGGCGCGCGCGCGCATCGCGCGCCGCCGCCGAGCCGCATCTCGCCGCCGGCTGCCGCCCGCGTCGGCTCTATCGCAAAA GCGACCCGAAACTTGCAAAA
Product: hypothetical protein
Products: NA
Alternate protein names: Lipoprotein Transmembrane; Transmembrane Protein
Number of amino acids: Translated: 201; Mature: 201
Protein sequence:
>201_residues MRACSMPRAKPRRFPMTMFRFRILPAAMLGAALALAGCDDRQSEQTVQRFKDFFNAIKPAPLFLKGLTPGVTTEAEIRGQ MGRPETERVYTDGSKRLEYPRGPMGNETYMVDIDASGRFVAATQVLTAANFAKIRPGMTQDEVRRLLGKPTEVARYPLKP ETVWSWRWLEDGVNQDAFFNVHFGPDGLVYTTSRSDILKGR
Sequences:
>Translated_201_residues MRACSMPRAKPRRFPMTMFRFRILPAAMLGAALALAGCDDRQSEQTVQRFKDFFNAIKPAPLFLKGLTPGVTTEAEIRGQ MGRPETERVYTDGSKRLEYPRGPMGNETYMVDIDASGRFVAATQVLTAANFAKIRPGMTQDEVRRLLGKPTEVARYPLKP ETVWSWRWLEDGVNQDAFFNVHFGPDGLVYTTSRSDILKGR >Mature_201_residues MRACSMPRAKPRRFPMTMFRFRILPAAMLGAALALAGCDDRQSEQTVQRFKDFFNAIKPAPLFLKGLTPGVTTEAEIRGQ MGRPETERVYTDGSKRLEYPRGPMGNETYMVDIDASGRFVAATQVLTAANFAKIRPGMTQDEVRRLLGKPTEVARYPLKP ETVWSWRWLEDGVNQDAFFNVHFGPDGLVYTTSRSDILKGR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22682; Mature: 22682
Theoretical pI: Translated: 10.25; Mature: 10.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 4.5 %Met (Translated Protein) 5.5 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 4.5 %Met (Mature Protein) 5.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRACSMPRAKPRRFPMTMFRFRILPAAMLGAALALAGCDDRQSEQTVQRFKDFFNAIKPA CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCC PLFLKGLTPGVTTEAEIRGQMGRPETERVYTDGSKRLEYPRGPMGNETYMVDIDASGRFV CEEEECCCCCCCCHHHHHCCCCCCCCCEEEECCCCCCCCCCCCCCCCEEEEEECCCCCEE AATQVLTAANFAKIRPGMTQDEVRRLLGKPTEVARYPLKPETVWSWRWLEDGVNQDAFFN HHHHHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHCCCCCCCCEEEEEHHHCCCCCCEEEE VHFGPDGLVYTTSRSDILKGR EEECCCCEEEECCCCCCCCCC >Mature Secondary Structure MRACSMPRAKPRRFPMTMFRFRILPAAMLGAALALAGCDDRQSEQTVQRFKDFFNAIKPA CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCC PLFLKGLTPGVTTEAEIRGQMGRPETERVYTDGSKRLEYPRGPMGNETYMVDIDASGRFV CEEEECCCCCCCCHHHHHCCCCCCCCCEEEECCCCCCCCCCCCCCCCEEEEEECCCCCEE AATQVLTAANFAKIRPGMTQDEVRRLLGKPTEVARYPLKPETVWSWRWLEDGVNQDAFFN HHHHHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHCCCCCCCCEEEEEHHHCCCCCCEEEE VHFGPDGLVYTTSRSDILKGR EEECCCCEEEECCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA