Click here to switch to the map view.

The map label for this gene is cyoC_1 [H]

Identifier: 237813134

GI number: 237813134

Start: 2824578

End: 2825183

Strand: Direct

Name: cyoC_1 [H]

Synonym: GBP346_A2896

Alternate gene names: 237813134

Gene position: 2824578-2825183 (Clockwise)

Preceding gene: 237813133

Following gene: 237813135

Centisome position: 68.92

GC content: 67.16

Gene sequence:

>606_bases
ATGTCGCACAACACGATGATGCTCGACCACGCGGCCTCGCACGATCATCCGCCGTCGCATTCGGTGTTCGGCTTCTGGCT
GTACCTGATGACCGACTGCGTGCTCTTCGCCGCGCTGTTCGCGACGTTCGCGGTGCTCGGCAACCAGTTCGCGGGCGGCC
CGACCGCGAAGGACCTGTTCGACATTCCGGGCGTCGCGCTCGAAACCGCCGCACTGCTGCTCTCGAGCATCACGTACGGC
TTCGCGATGATCGGCGCGCACCAGCGGCGGCGCGGCGCGGTGTTCGGCTGGCTCGCGGTGACGTTCGTGCTCGGCGCGGC
GTTCCTCGCGATGGAGCTGCGCGAGTTCTCGCATCTCGTCGCCGAAGGCGCGGGCCCGCAGCGCAGCGCGTTCCTGTCGT
CGTTCTTCACGCTCGTCGGCACGCACGGGCTGCACGTGACGGCGGGCCTCGTGTGGATGGCCGTGCTCGTCGCGCAGGCG
CTGCGCCGCCCCGATCTGACCGAGCGCGACATCCGCCGGCTCACTTGCCTCAGCCTCTTCTGGCACTTCCTCGACATCGT
CTGGATCTGCGTCTTTTCCTTTGTCTATCTCGCGAGCGTGATCTAA

Upstream 100 bases:

>100_bases
GCTATTACATTGCGGCCGACACCGTCCGCGAGATCGAGGAAAGGCGCGCCGGCGCGCGCGCGCCGGCGCGGCCGGCCGAA
GTCGAACTGGAGGCAAACTG

Downstream 100 bases:

>100_bases
ATGGCCCATTCGCATCCTTCCCACGGCGACGAAGCACACGGCACCGTCGGCGGCTATATCGCGGGCTTCGTGCTGTCGGT
GCTGCTCACGGCCGCGTCGT

Product: cytochrome o ubiquinol oxidase, subunit III

Products: NA

Alternate protein names: Cytochrome o ubiquinol oxidase subunit III [H]

Number of amino acids: Translated: 201; Mature: 200

Protein sequence:

>201_residues
MSHNTMMLDHAASHDHPPSHSVFGFWLYLMTDCVLFAALFATFAVLGNQFAGGPTAKDLFDIPGVALETAALLLSSITYG
FAMIGAHQRRRGAVFGWLAVTFVLGAAFLAMELREFSHLVAEGAGPQRSAFLSSFFTLVGTHGLHVTAGLVWMAVLVAQA
LRRPDLTERDIRRLTCLSLFWHFLDIVWICVFSFVYLASVI

Sequences:

>Translated_201_residues
MSHNTMMLDHAASHDHPPSHSVFGFWLYLMTDCVLFAALFATFAVLGNQFAGGPTAKDLFDIPGVALETAALLLSSITYG
FAMIGAHQRRRGAVFGWLAVTFVLGAAFLAMELREFSHLVAEGAGPQRSAFLSSFFTLVGTHGLHVTAGLVWMAVLVAQA
LRRPDLTERDIRRLTCLSLFWHFLDIVWICVFSFVYLASVI
>Mature_200_residues
SHNTMMLDHAASHDHPPSHSVFGFWLYLMTDCVLFAALFATFAVLGNQFAGGPTAKDLFDIPGVALETAALLLSSITYGF
AMIGAHQRRRGAVFGWLAVTFVLGAAFLAMELREFSHLVAEGAGPQRSAFLSSFFTLVGTHGLHVTAGLVWMAVLVAQAL
RRPDLTERDIRRLTCLSLFWHFLDIVWICVFSFVYLASVI

Specific function: Cytochrome o terminal oxidase complex is the component of the aerobic respiratory chain of E.coli that predominates when cells are grown at high aeration [H]

COG id: COG1845

COG function: function code C; Heme/copper-type cytochrome/quinol oxidase, subunit 3

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cytochrome c oxidase subunit 3 family [H]

Homologues:

Organism=Escherichia coli, GI1786633, Length=199, Percent_Identity=57.286432160804, Blast_Score=232, Evalue=1e-62,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000298
- InterPro:   IPR013833
- InterPro:   IPR014206 [H]

Pfam domain/function: PF00510 COX3 [H]

EC number: 1.10.3.-

Molecular weight: Translated: 22109; Mature: 21978

Theoretical pI: Translated: 7.07; Mature: 7.07

Prosite motif: PS50253 COX3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSHNTMMLDHAASHDHPPSHSVFGFWLYLMTDCVLFAALFATFAVLGNQFAGGPTAKDLF
CCCCCEEHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHH
DIPGVALETAALLLSSITYGFAMIGAHQRRRGAVFGWLAVTFVLGAAFLAMELREFSHLV
HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AEGAGPQRSAFLSSFFTLVGTHGLHVTAGLVWMAVLVAQALRRPDLTERDIRRLTCLSLF
HCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH
WHFLDIVWICVFSFVYLASVI
HHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SHNTMMLDHAASHDHPPSHSVFGFWLYLMTDCVLFAALFATFAVLGNQFAGGPTAKDLF
CCCCEEHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHH
DIPGVALETAALLLSSITYGFAMIGAHQRRRGAVFGWLAVTFVLGAAFLAMELREFSHLV
HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AEGAGPQRSAFLSSFFTLVGTHGLHVTAGLVWMAVLVAQALRRPDLTERDIRRLTCLSLF
HCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH
WHFLDIVWICVFSFVYLASVI
HHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Oxidoreductases [C]

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 10984043 [H]