| Definition | Burkholderia pseudomallei MSHR346 chromosome I, complete genome. |
|---|---|
| Accession | NC_012695 |
| Length | 4,098,576 |
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The map label for this gene is 237812994
Identifier: 237812994
GI number: 237812994
Start: 2682146
End: 2682493
Strand: Direct
Name: 237812994
Synonym: GBP346_A2754
Alternate gene names: NA
Gene position: 2682146-2682493 (Clockwise)
Preceding gene: 237812993
Following gene: 237812999
Centisome position: 65.44
GC content: 71.55
Gene sequence:
>348_bases ATGAAACCGATTCTCGTTCGCGCCGCGCCGCTCGCGGCGCTCATCGCGGCCGCGTCGCTGAGCGGATGCGTCGCGCCGCC GTCGACGACGGTCCTGAGCCGGCTGCCCGAACAGGCGGCGGGCACGACGGCGCACACGCTCACGCCCGACGAGCGCAAGC GCTACGACGAAATCGACCGGCAGGTGCTGCGCGAGCAGAACGCGGCAATCGCAGCCGAGGATGCGGCGCGCGCCTGGTCG TATTACTCTCCGCCGCCCGTCACCTACTACGGCGGCTACTATGGCGGCGGCTGGGGGCGCGGTTGGGGCTCGGGATTCGG CTACGGCTACCCGGGCTGGTGGTGGTGA
Upstream 100 bases:
>100_bases CCGCGCAACGGCACTGATTCGCCCGCCCGCCTGCGTGCGGGCAATGCGCCGCGCCCGCCATCCGACGGAGCGGGCCCGGC ACAAGCCAGGAGGCAGTAGC
Downstream 100 bases:
>100_bases AATCGACGAATGCCGAGCAATTAAAAACCAGCAGGAAATAAAAAAGCCAAAAGCGCGGCCGAAAGACCGCGCTTTTTGAT TGGGTTTCCGAAGCATCTCG
Product: putative lipoprotein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 115; Mature: 115
Protein sequence:
>115_residues MKPILVRAAPLAALIAAASLSGCVAPPSTTVLSRLPEQAAGTTAHTLTPDERKRYDEIDRQVLREQNAAIAAEDAARAWS YYSPPPVTYYGGYYGGGWGRGWGSGFGYGYPGWWW
Sequences:
>Translated_115_residues MKPILVRAAPLAALIAAASLSGCVAPPSTTVLSRLPEQAAGTTAHTLTPDERKRYDEIDRQVLREQNAAIAAEDAARAWS YYSPPPVTYYGGYYGGGWGRGWGSGFGYGYPGWWW >Mature_115_residues MKPILVRAAPLAALIAAASLSGCVAPPSTTVLSRLPEQAAGTTAHTLTPDERKRYDEIDRQVLREQNAAIAAEDAARAWS YYSPPPVTYYGGYYGGGWGRGWGSGFGYGYPGWWW
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12453; Mature: 12453
Theoretical pI: Translated: 8.40; Mature: 8.40
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKPILVRAAPLAALIAAASLSGCVAPPSTTVLSRLPEQAAGTTAHTLTPDERKRYDEIDR CCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHCHHHHCCCCCCCCCCHHHHHHHHHHH QVLREQNAAIAAEDAARAWSYYSPPPVTYYGGYYGGGWGRGWGSGFGYGYPGWWW HHHHHHCCCCCHHHHHHHCCCCCCCCCEECCCEECCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MKPILVRAAPLAALIAAASLSGCVAPPSTTVLSRLPEQAAGTTAHTLTPDERKRYDEIDR CCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHCHHHHCCCCCCCCCCHHHHHHHHHHH QVLREQNAAIAAEDAARAWSYYSPPPVTYYGGYYGGGWGRGWGSGFGYGYPGWWW HHHHHHCCCCCHHHHHHHCCCCCCCCCEECCCEECCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA