| Definition | Burkholderia pseudomallei MSHR346 chromosome I, complete genome. |
|---|---|
| Accession | NC_012695 |
| Length | 4,098,576 |
Click here to switch to the map view.
The map label for this gene is 237812975
Identifier: 237812975
GI number: 237812975
Start: 2662506
End: 2662979
Strand: Direct
Name: 237812975
Synonym: GBP346_A2735
Alternate gene names: NA
Gene position: 2662506-2662979 (Clockwise)
Preceding gene: 237812974
Following gene: 237812977
Centisome position: 64.96
GC content: 61.39
Gene sequence:
>474_bases ATGAACGACGAACAGAACACCGCACCGAACTGGTTGCAGGAAGGCGATCTGCTCTATCGCCTCACGATCGACACGCATCG GCAAAACCATGACGAGATTTATGTCACGCTGGCCGAAGGATCGCGCGACATACGCGCGCGAGCGGCGCGAGCGGCCGAGC TTCGAGAAGCTCTGAAGGGACTCGGATCCAATGGGCTCCCCGATGGCACCTCGGCCGAAGCGCTCACGAAGCTCAGAAGG CTCATTGCGGCCGATGGATATGCTGTCTCGTTTCAGACGATGCAGCAGTATCGATGCGCGCTGCTACGGGAGATCGACAA CACGAGTCCCGTTCGCTCGGCCCCGTCCGCGATGACGCAAGAACAGTACGCTGCGATCGAGTTTGCGCTTGGCGCGTGCG CCGGACATCCGGCCGGCGAACAGCATGTGGCAGCACTCGAATCACTGCTCTCGGGGGGAGGCAACCACGCATGA
Upstream 100 bases:
>100_bases AGGACGCCCGCACGTGGGCCGCAGCCGCCGGCGTCACGCTCGAAACGGGTTTGATGCAGCTCGGCCGGGCGATACCACAC GAACAGAATTGAGGATGACC
Downstream 100 bases:
>100_bases CCGTCGCGATGAAGCCCATATATCTCGACATTGCATCGGTGTCAGCAGCGGTCTCCCTGTCGCCCGCGGTCATCCACAAA CTCGTCCGCCAAGAGGAGTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 157; Mature: 157
Protein sequence:
>157_residues MNDEQNTAPNWLQEGDLLYRLTIDTHRQNHDEIYVTLAEGSRDIRARAARAAELREALKGLGSNGLPDGTSAEALTKLRR LIAADGYAVSFQTMQQYRCALLREIDNTSPVRSAPSAMTQEQYAAIEFALGACAGHPAGEQHVAALESLLSGGGNHA
Sequences:
>Translated_157_residues MNDEQNTAPNWLQEGDLLYRLTIDTHRQNHDEIYVTLAEGSRDIRARAARAAELREALKGLGSNGLPDGTSAEALTKLRR LIAADGYAVSFQTMQQYRCALLREIDNTSPVRSAPSAMTQEQYAAIEFALGACAGHPAGEQHVAALESLLSGGGNHA >Mature_157_residues MNDEQNTAPNWLQEGDLLYRLTIDTHRQNHDEIYVTLAEGSRDIRARAARAAELREALKGLGSNGLPDGTSAEALTKLRR LIAADGYAVSFQTMQQYRCALLREIDNTSPVRSAPSAMTQEQYAAIEFALGACAGHPAGEQHVAALESLLSGGGNHA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16963; Mature: 16963
Theoretical pI: Translated: 5.21; Mature: 5.21
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNDEQNTAPNWLQEGDLLYRLTIDTHRQNHDEIYVTLAEGSRDIRARAARAAELREALKG CCCCCCCCCCHHHCCCEEEEEEECCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHH LGSNGLPDGTSAEALTKLRRLIAADGYAVSFQTMQQYRCALLREIDNTSPVRSAPSAMTQ CCCCCCCCCCCHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHH EQYAAIEFALGACAGHPAGEQHVAALESLLSGGGNHA HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MNDEQNTAPNWLQEGDLLYRLTIDTHRQNHDEIYVTLAEGSRDIRARAARAAELREALKG CCCCCCCCCCHHHCCCEEEEEEECCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHH LGSNGLPDGTSAEALTKLRRLIAADGYAVSFQTMQQYRCALLREIDNTSPVRSAPSAMTQ CCCCCCCCCCCHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHH EQYAAIEFALGACAGHPAGEQHVAALESLLSGGGNHA HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA