Definition Burkholderia pseudomallei MSHR346 chromosome I, complete genome.
Accession NC_012695
Length 4,098,576

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The map label for this gene is 237812939

Identifier: 237812939

GI number: 237812939

Start: 2633739

End: 2636153

Strand: Reverse

Name: 237812939

Synonym: GBP346_A2699

Alternate gene names: NA

Gene position: 2636153-2633739 (Counterclockwise)

Preceding gene: 237812940

Following gene: 237812938

Centisome position: 64.32

GC content: 67.83

Gene sequence:

>2415_bases
ATGGCACGCGAAATCGCGTTGGGGATCGTGATCGGCGGGGCGGTATCCGCGACGTTCGGCAAGGCGATCTCCGACACGCA
ATCGAAGATCGTCGGGCTGCGCAAGACGGCCGCTGAAAAAGGCATGTGGCAGCGCCAGATCGGCGAGACGATCAAGTTAC
AGGACGAGTTTCGCCGCCTGCATCGCGCGGGCGACAGCGCGGCCGAGACGATCCGGCGCAAGCTGGATTCGAATCTGCGG
ACGTTGCGCGACGCCGGCATCGAGGTGGACCGGCTTGATCGCGCGTATGCGCGGCTTGGCCGCACCGCGCGCGGGCTCGA
ATTGCGCGCGATGGGGCACGAGCGCCTGAGCGGCGGCCGGGAGGCGATGCGCGGCGCGATCGGCGACTCGATGAAGCTGA
CCGCCGCGATCGCGGTGCCGACGATGGTGTCGGCGCAGTATCAGGCGATCATCCGCGACATCGCGATCAAGGCGGGCATC
GCGCGCACGGGCGAAGAGCGCGCGATGTCCGACCGGATTCGACGCGATGCATCGGCCAACGGGATGAACCGCAACGAACT
GGCCGAGGCGGTGAACCAGATGGTGGCGGCCGGGATGGACGTCGACCGGGCGCTCGGCTTCGCGCCGGCCGTCGCGAAAT
TTTCGGTCGGCCAAGGTGCGACGAGTGTCGAGACGGCGAAGATGATTCAGGCGCTGGAGCAAAACGCGGACATCAAGGAT
CCGGCCGCGATGCTCAAGGCGCTGGAGGCGATCGCGTATCTCGGCAAGGAAGGCTCGTTCGAGTCGGTCGACATGGCCCG
CTGGTTCCCGGTGCTGCTCGCCGAAATGAAGAAGATCGGCATCACGGGGCAGGATTCGGTGACGCAGTTGGGCGCGATGC
TTCAGGTGCAGATGAAGACGGCGGGCAACGCCGACGAAGCCGCGAACAACCTGAAAAACTGGTTCTCGAAGATCGGCTCG
GGCGAGACGGAACGCAACTACAAGAAAGCCGGCGTCGACTACGAAGCGAAGATGAAGGAGGCGATCGGCAAGGGCTGGTC
GACGCTCGAAGCGTCGTTCGTGCTCGCGCGCGCGTACATCGAGCGGGTCGATCCGGCGAAGGCGAAGCAGTTGGCCGAGA
CGGCGAAGTCGATCAACGCCGAGCTGGATCCGGCCAAGCGTCAGAAGCAGATCCGCGCGTTCGAAGAGACGATGAAGACG
GGCGACCTGTTCAACGACATGCAGGTGAAGGCGGCGCTCACCGCGTACTTGCAGAACGCCGATCTCTACTCGAATCTGAA
GCGCAACGCCGCATCGGCGAGCGGCGAGATCGAGAAGGATCTCAAAGACCGCCGCGACGCGTCCAAGCAGATCTGGAAAG
AAGTTGCGGATCAGTGGGACGAGGCAATGCGCAGCATCGGCGACGCGCTGCGTCCCGTGACGGATATTGCGGGCGAGCAG
GCGAAGAAGGCGGGCGGCAAGGTGCGCGATATCGTCGATGCGTCGCCACGTGCGGCGGCGGCCGTCATCGGCGTCGCGGG
CGCGGCGATCGCGTATCGCGGTGCGCGTGCGGCGTGGTCGATTGGTCGCGGCGTGCTCGATGTCGCGCGTGGTGGTTGGT
TGGCGCGAGGCGGCGAGCGCAGCGGGAAGGGCGGCAAGGGAGCGAAGCCGGGGCGCGGCGCTCAGGCGCTCGATGCGCTC
GGCGCGGCGGCCAGCGGCGTGCAGCGTGTCTTCGTCGTCAACATGCCGGGCGGCGGCATCGGCGGCGGATCGGTCGGCGA
TCTGATCGAGGGTGCGGCAGGTGTGGCGAGCGGCAGGGCGGGCAAGGCCGGGCGCTTCGGGCGGCTTGGCCGGGCGCTAG
GCGGGATTGTCGGCCGCGTGTTGCCGTATGCCGGCAAGATCGCGCTCGCCGGGACGGTGCTGAAGCTGGGGCTCGCCGCG
AAGGACGCATACGCGGTCGCGGCGGGCGACGATCCGCGCGCGCGGAAGGCGGAGAGCTTCGCGGGCATCGGCGGCAGTCT
CGCGGGCGGCGTCGTCGGCGCGAAGCTCGGCGCGTCGATCGGCGCGTTCGGTGGGCCGCTTGGCGCTGCGTTCGGCGGCG
TCGCGGGCGGGGCGATCGGCACCTTCGCCGGCCAGAAGCTGCTCGGCGCACTCACGCGATGGGCGTTTCAGCAGCGCGGC
GACACGCCCGAAGCCGCGCGCGCGGTCGCGAATGCGAAGGCGCTCGTCGAGCCCGGCGTCGCCGAGCGGCGCGCGTTCAA
GGTCGAGCAGCAAAACAGCTTTGCGCCGGTCTTCAACATCAAGCTGGAGGGCGGCTCGGATCAGGAGATGGCTGACCGGC
TGCTCGCACGTATCAATCCGCAGATCCAACGGGCGATGACCCAATCGATGAACAACAACAACCGGTCGGCGCTGTTCGAT
GCGCCGCATCTGTAG

Upstream 100 bases:

>100_bases
GCCTGCTGCGTGAGTGCGCGGTGAGCCCTCAGGCGGTCGACGATCTGACGCTTGAGGATCTGGTGTGGTGGTTGACGGAC
TGATGTGACAGGGAGCGGAG

Downstream 100 bases:

>100_bases
GAGCGCCGATGGATTTCGTGAAGAGCATCACGCAGGCGGCGACGCAGGCCAGCATCGCGGCCGAGCGCGTGCAGCACGTG
AGCCGTGTCTACGAGCGCAA

Product: tail tape meausure protein

Products: NA

Alternate protein names: Bacteriophage Protein; Phage Tail Tape Measure Core Region; Pyocin R2_PP Tail Length Determination Protein; Bacteriophage Tail Protein; Tail Length Determinator Protein; Prophage; Tail Tape Meausure Protein; Phage Minor Tail Protein; Tail Tape Measure Protein; Phage Tail Tape-Measure Protein; Phage Tail Length Determination Protein; Bacteriophage Tail Length Determination Protein; Phage Tail Protein; Bacteriophage Protein; Tail Tape Measure Core Region; Phage Tail Tape Measure Protein Core Region

Number of amino acids: Translated: 804; Mature: 803

Protein sequence:

>804_residues
MAREIALGIVIGGAVSATFGKAISDTQSKIVGLRKTAAEKGMWQRQIGETIKLQDEFRRLHRAGDSAAETIRRKLDSNLR
TLRDAGIEVDRLDRAYARLGRTARGLELRAMGHERLSGGREAMRGAIGDSMKLTAAIAVPTMVSAQYQAIIRDIAIKAGI
ARTGEERAMSDRIRRDASANGMNRNELAEAVNQMVAAGMDVDRALGFAPAVAKFSVGQGATSVETAKMIQALEQNADIKD
PAAMLKALEAIAYLGKEGSFESVDMARWFPVLLAEMKKIGITGQDSVTQLGAMLQVQMKTAGNADEAANNLKNWFSKIGS
GETERNYKKAGVDYEAKMKEAIGKGWSTLEASFVLARAYIERVDPAKAKQLAETAKSINAELDPAKRQKQIRAFEETMKT
GDLFNDMQVKAALTAYLQNADLYSNLKRNAASASGEIEKDLKDRRDASKQIWKEVADQWDEAMRSIGDALRPVTDIAGEQ
AKKAGGKVRDIVDASPRAAAAVIGVAGAAIAYRGARAAWSIGRGVLDVARGGWLARGGERSGKGGKGAKPGRGAQALDAL
GAAASGVQRVFVVNMPGGGIGGGSVGDLIEGAAGVASGRAGKAGRFGRLGRALGGIVGRVLPYAGKIALAGTVLKLGLAA
KDAYAVAAGDDPRARKAESFAGIGGSLAGGVVGAKLGASIGAFGGPLGAAFGGVAGGAIGTFAGQKLLGALTRWAFQQRG
DTPEAARAVANAKALVEPGVAERRAFKVEQQNSFAPVFNIKLEGGSDQEMADRLLARINPQIQRAMTQSMNNNNRSALFD
APHL

Sequences:

>Translated_804_residues
MAREIALGIVIGGAVSATFGKAISDTQSKIVGLRKTAAEKGMWQRQIGETIKLQDEFRRLHRAGDSAAETIRRKLDSNLR
TLRDAGIEVDRLDRAYARLGRTARGLELRAMGHERLSGGREAMRGAIGDSMKLTAAIAVPTMVSAQYQAIIRDIAIKAGI
ARTGEERAMSDRIRRDASANGMNRNELAEAVNQMVAAGMDVDRALGFAPAVAKFSVGQGATSVETAKMIQALEQNADIKD
PAAMLKALEAIAYLGKEGSFESVDMARWFPVLLAEMKKIGITGQDSVTQLGAMLQVQMKTAGNADEAANNLKNWFSKIGS
GETERNYKKAGVDYEAKMKEAIGKGWSTLEASFVLARAYIERVDPAKAKQLAETAKSINAELDPAKRQKQIRAFEETMKT
GDLFNDMQVKAALTAYLQNADLYSNLKRNAASASGEIEKDLKDRRDASKQIWKEVADQWDEAMRSIGDALRPVTDIAGEQ
AKKAGGKVRDIVDASPRAAAAVIGVAGAAIAYRGARAAWSIGRGVLDVARGGWLARGGERSGKGGKGAKPGRGAQALDAL
GAAASGVQRVFVVNMPGGGIGGGSVGDLIEGAAGVASGRAGKAGRFGRLGRALGGIVGRVLPYAGKIALAGTVLKLGLAA
KDAYAVAAGDDPRARKAESFAGIGGSLAGGVVGAKLGASIGAFGGPLGAAFGGVAGGAIGTFAGQKLLGALTRWAFQQRG
DTPEAARAVANAKALVEPGVAERRAFKVEQQNSFAPVFNIKLEGGSDQEMADRLLARINPQIQRAMTQSMNNNNRSALFD
APHL
>Mature_803_residues
AREIALGIVIGGAVSATFGKAISDTQSKIVGLRKTAAEKGMWQRQIGETIKLQDEFRRLHRAGDSAAETIRRKLDSNLRT
LRDAGIEVDRLDRAYARLGRTARGLELRAMGHERLSGGREAMRGAIGDSMKLTAAIAVPTMVSAQYQAIIRDIAIKAGIA
RTGEERAMSDRIRRDASANGMNRNELAEAVNQMVAAGMDVDRALGFAPAVAKFSVGQGATSVETAKMIQALEQNADIKDP
AAMLKALEAIAYLGKEGSFESVDMARWFPVLLAEMKKIGITGQDSVTQLGAMLQVQMKTAGNADEAANNLKNWFSKIGSG
ETERNYKKAGVDYEAKMKEAIGKGWSTLEASFVLARAYIERVDPAKAKQLAETAKSINAELDPAKRQKQIRAFEETMKTG
DLFNDMQVKAALTAYLQNADLYSNLKRNAASASGEIEKDLKDRRDASKQIWKEVADQWDEAMRSIGDALRPVTDIAGEQA
KKAGGKVRDIVDASPRAAAAVIGVAGAAIAYRGARAAWSIGRGVLDVARGGWLARGGERSGKGGKGAKPGRGAQALDALG
AAASGVQRVFVVNMPGGGIGGGSVGDLIEGAAGVASGRAGKAGRFGRLGRALGGIVGRVLPYAGKIALAGTVLKLGLAAK
DAYAVAAGDDPRARKAESFAGIGGSLAGGVVGAKLGASIGAFGGPLGAAFGGVAGGAIGTFAGQKLLGALTRWAFQQRGD
TPEAARAVANAKALVEPGVAERRAFKVEQQNSFAPVFNIKLEGGSDQEMADRLLARINPQIQRAMTQSMNNNNRSALFDA
PHL

Specific function: Unknown

COG id: COG3941

COG function: function code R; Mu-like prophage protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 84369; Mature: 84238

Theoretical pI: Translated: 10.54; Mature: 10.54

Prosite motif: PS00104 EPSP_SYNTHASE_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAREIALGIVIGGAVSATFGKAISDTQSKIVGLRKTAAEKGMWQRQIGETIKLQDEFRRL
CCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHCCHHHHHHHHHHH
HRAGDSAAETIRRKLDSNLRTLRDAGIEVDRLDRAYARLGRTARGLELRAMGHERLSGGR
HHCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCHHHCCHHHHCCHH
EAMRGAIGDSMKLTAAIAVPTMVSAQYQAIIRDIAIKAGIARTGEERAMSDRIRRDASAN
HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCC
GMNRNELAEAVNQMVAAGMDVDRALGFAPAVAKFSVGQGATSVETAKMIQALEQNADIKD
CCCHHHHHHHHHHHHHHCCCHHHHHCCHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCC
PAAMLKALEAIAYLGKEGSFESVDMARWFPVLLAEMKKIGITGQDSVTQLGAMLQVQMKT
HHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH
AGNADEAANNLKNWFSKIGSGETERNYKKAGVDYEAKMKEAIGKGWSTLEASFVLARAYI
CCCHHHHHHHHHHHHHHHCCCCCCCCHHHCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHH
ERVDPAKAKQLAETAKSINAELDPAKRQKQIRAFEETMKTGDLFNDMQVKAALTAYLQNA
HHCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCC
DLYSNLKRNAASASGEIEKDLKDRRDASKQIWKEVADQWDEAMRSIGDALRPVTDIAGEQ
HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AKKAGGKVRDIVDASPRAAAAVIGVAGAAIAYRGARAAWSIGRGVLDVARGGWLARGGER
HHHCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCEECCCCC
SGKGGKGAKPGRGAQALDALGAAASGVQRVFVVNMPGGGIGGGSVGDLIEGAAGVASGRA
CCCCCCCCCCCCCHHHHHHHHHHHHCCEEEEEEECCCCCCCCCCHHHHHHHHHHCCCCCC
GKAGRFGRLGRALGGIVGRVLPYAGKIALAGTVLKLGLAAKDAYAVAAGDDPRARKAESF
CCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCEEEECCCCCHHHHHHHH
AGIGGSLAGGVVGAKLGASIGAFGGPLGAAFGGVAGGAIGTFAGQKLLGALTRWAFQQRG
HCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCC
DTPEAARAVANAKALVEPGVAERRAFKVEQQNSFAPVFNIKLEGGSDQEMADRLLARINP
CCHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCEEEEEECCCCCHHHHHHHHHHHCH
QIQRAMTQSMNNNNRSALFDAPHL
HHHHHHHHHHCCCCCCCCCCCCCC
>Mature Secondary Structure 
AREIALGIVIGGAVSATFGKAISDTQSKIVGLRKTAAEKGMWQRQIGETIKLQDEFRRL
CCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHCCHHHHHHHHHHH
HRAGDSAAETIRRKLDSNLRTLRDAGIEVDRLDRAYARLGRTARGLELRAMGHERLSGGR
HHCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCHHHCCHHHHCCHH
EAMRGAIGDSMKLTAAIAVPTMVSAQYQAIIRDIAIKAGIARTGEERAMSDRIRRDASAN
HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCC
GMNRNELAEAVNQMVAAGMDVDRALGFAPAVAKFSVGQGATSVETAKMIQALEQNADIKD
CCCHHHHHHHHHHHHHHCCCHHHHHCCHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCC
PAAMLKALEAIAYLGKEGSFESVDMARWFPVLLAEMKKIGITGQDSVTQLGAMLQVQMKT
HHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH
AGNADEAANNLKNWFSKIGSGETERNYKKAGVDYEAKMKEAIGKGWSTLEASFVLARAYI
CCCHHHHHHHHHHHHHHHCCCCCCCCHHHCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHH
ERVDPAKAKQLAETAKSINAELDPAKRQKQIRAFEETMKTGDLFNDMQVKAALTAYLQNA
HHCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCC
DLYSNLKRNAASASGEIEKDLKDRRDASKQIWKEVADQWDEAMRSIGDALRPVTDIAGEQ
HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AKKAGGKVRDIVDASPRAAAAVIGVAGAAIAYRGARAAWSIGRGVLDVARGGWLARGGER
HHHCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCEECCCCC
SGKGGKGAKPGRGAQALDALGAAASGVQRVFVVNMPGGGIGGGSVGDLIEGAAGVASGRA
CCCCCCCCCCCCCHHHHHHHHHHHHCCEEEEEEECCCCCCCCCCHHHHHHHHHHCCCCCC
GKAGRFGRLGRALGGIVGRVLPYAGKIALAGTVLKLGLAAKDAYAVAAGDDPRARKAESF
CCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCEEEECCCCCHHHHHHHH
AGIGGSLAGGVVGAKLGASIGAFGGPLGAAFGGVAGGAIGTFAGQKLLGALTRWAFQQRG
HCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCC
DTPEAARAVANAKALVEPGVAERRAFKVEQQNSFAPVFNIKLEGGSDQEMADRLLARINP
CCHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCEEEEEECCCCCHHHHHHHHHHHCH
QIQRAMTQSMNNNNRSALFDAPHL
HHHHHHHHHHCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA