Definition Burkholderia pseudomallei MSHR346 chromosome I, complete genome.
Accession NC_012695
Length 4,098,576

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The map label for this gene is 237812935

Identifier: 237812935

GI number: 237812935

Start: 2631025

End: 2631474

Strand: Direct

Name: 237812935

Synonym: GBP346_A2695

Alternate gene names: NA

Gene position: 2631025-2631474 (Clockwise)

Preceding gene: 237812930

Following gene: 237812968

Centisome position: 64.19

GC content: 43.78

Gene sequence:

>450_bases
ATGAGTCAGTACATCATCGAATACGCATCCAAAAGGAATTTTGTGATTGGTGTCGCCGATCAAATGTCGGGCCAATCTGT
CGTACTTCTCGACCTCCAAAAAAACCCCGATCCGAGCAAATATATCTGGGATCTGCAAGATGATTTTACGATTGCACTTC
ACTCCTCCTCTGACAATCTAATCATCGACGTAGCCAATCTCACAGATCAATCGCCTTTCTTTCTCAGCGTTTACGATCCC
GACAACGTCACGCAAACACAGAAATGGCGTTATAAGGATAGTTTTTATAGAAACGAAACCAACCAAAAATATTGCATCGA
CCTCGACCATCGCCAAATTGTCGATGGATCCACCATTTGGGCCTACACTTTCAATGGATCACCGGCTCAGCAGTGGATTC
TTTCCCCATACAGCTCACAGTTTGTCGAGCAACTAATCAATTTGAAGTAA

Upstream 100 bases:

>100_bases
AATCTTATTATTCAATCTCCGGGCATTGATAGAACGAGCCAAAAAGCTCCCCTATCGCCTCTCCTCCGCCCGCCATTAAT
TTGATAATTGGAGTTTAAAA

Downstream 100 bases:

>100_bases
CTTAGCCGACTCGCCGGAACGCTAATAGACAGCATTCCGGCGAATTAATGCTCAAACATTTTTATACGCACCCTTAATTT
AAACCGCCGCGATCGCACGC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 149; Mature: 148

Protein sequence:

>149_residues
MSQYIIEYASKRNFVIGVADQMSGQSVVLLDLQKNPDPSKYIWDLQDDFTIALHSSSDNLIIDVANLTDQSPFFLSVYDP
DNVTQTQKWRYKDSFYRNETNQKYCIDLDHRQIVDGSTIWAYTFNGSPAQQWILSPYSSQFVEQLINLK

Sequences:

>Translated_149_residues
MSQYIIEYASKRNFVIGVADQMSGQSVVLLDLQKNPDPSKYIWDLQDDFTIALHSSSDNLIIDVANLTDQSPFFLSVYDP
DNVTQTQKWRYKDSFYRNETNQKYCIDLDHRQIVDGSTIWAYTFNGSPAQQWILSPYSSQFVEQLINLK
>Mature_148_residues
SQYIIEYASKRNFVIGVADQMSGQSVVLLDLQKNPDPSKYIWDLQDDFTIALHSSSDNLIIDVANLTDQSPFFLSVYDPD
NVTQTQKWRYKDSFYRNETNQKYCIDLDHRQIVDGSTIWAYTFNGSPAQQWILSPYSSQFVEQLINLK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17304; Mature: 17173

Theoretical pI: Translated: 4.37; Mature: 4.37

Prosite motif: PS50231 RICIN_B_LECTIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSQYIIEYASKRNFVIGVADQMSGQSVVLLDLQKNPDPSKYIWDLQDDFTIALHSSSDNL
CCCEEEEECCCCCEEEEECCCCCCCEEEEEEECCCCCCCCEEEECCCCEEEEEECCCCCE
IIDVANLTDQSPFFLSVYDPDNVTQTQKWRYKDSFYRNETNQKYCIDLDHRQIVDGSTIW
EEEEECCCCCCCEEEEEECCCCCCCCCCEEECCHHHCCCCCCEEEEEECCCEEECCCEEE
AYTFNGSPAQQWILSPYSSQFVEQLINLK
EEEECCCCHHHEEECCCHHHHHHHHHCCC
>Mature Secondary Structure 
SQYIIEYASKRNFVIGVADQMSGQSVVLLDLQKNPDPSKYIWDLQDDFTIALHSSSDNL
CCEEEEECCCCCEEEEECCCCCCCEEEEEEECCCCCCCCEEEECCCCEEEEEECCCCCE
IIDVANLTDQSPFFLSVYDPDNVTQTQKWRYKDSFYRNETNQKYCIDLDHRQIVDGSTIW
EEEEECCCCCCCEEEEEECCCCCCCCCCEEECCHHHCCCCCCEEEEEECCCEEECCCEEE
AYTFNGSPAQQWILSPYSSQFVEQLINLK
EEEECCCCHHHEEECCCHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA