| Definition | Burkholderia pseudomallei MSHR346 chromosome I, complete genome. |
|---|---|
| Accession | NC_012695 |
| Length | 4,098,576 |
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The map label for this gene is 237812935
Identifier: 237812935
GI number: 237812935
Start: 2631025
End: 2631474
Strand: Direct
Name: 237812935
Synonym: GBP346_A2695
Alternate gene names: NA
Gene position: 2631025-2631474 (Clockwise)
Preceding gene: 237812930
Following gene: 237812968
Centisome position: 64.19
GC content: 43.78
Gene sequence:
>450_bases ATGAGTCAGTACATCATCGAATACGCATCCAAAAGGAATTTTGTGATTGGTGTCGCCGATCAAATGTCGGGCCAATCTGT CGTACTTCTCGACCTCCAAAAAAACCCCGATCCGAGCAAATATATCTGGGATCTGCAAGATGATTTTACGATTGCACTTC ACTCCTCCTCTGACAATCTAATCATCGACGTAGCCAATCTCACAGATCAATCGCCTTTCTTTCTCAGCGTTTACGATCCC GACAACGTCACGCAAACACAGAAATGGCGTTATAAGGATAGTTTTTATAGAAACGAAACCAACCAAAAATATTGCATCGA CCTCGACCATCGCCAAATTGTCGATGGATCCACCATTTGGGCCTACACTTTCAATGGATCACCGGCTCAGCAGTGGATTC TTTCCCCATACAGCTCACAGTTTGTCGAGCAACTAATCAATTTGAAGTAA
Upstream 100 bases:
>100_bases AATCTTATTATTCAATCTCCGGGCATTGATAGAACGAGCCAAAAAGCTCCCCTATCGCCTCTCCTCCGCCCGCCATTAAT TTGATAATTGGAGTTTAAAA
Downstream 100 bases:
>100_bases CTTAGCCGACTCGCCGGAACGCTAATAGACAGCATTCCGGCGAATTAATGCTCAAACATTTTTATACGCACCCTTAATTT AAACCGCCGCGATCGCACGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 149; Mature: 148
Protein sequence:
>149_residues MSQYIIEYASKRNFVIGVADQMSGQSVVLLDLQKNPDPSKYIWDLQDDFTIALHSSSDNLIIDVANLTDQSPFFLSVYDP DNVTQTQKWRYKDSFYRNETNQKYCIDLDHRQIVDGSTIWAYTFNGSPAQQWILSPYSSQFVEQLINLK
Sequences:
>Translated_149_residues MSQYIIEYASKRNFVIGVADQMSGQSVVLLDLQKNPDPSKYIWDLQDDFTIALHSSSDNLIIDVANLTDQSPFFLSVYDP DNVTQTQKWRYKDSFYRNETNQKYCIDLDHRQIVDGSTIWAYTFNGSPAQQWILSPYSSQFVEQLINLK >Mature_148_residues SQYIIEYASKRNFVIGVADQMSGQSVVLLDLQKNPDPSKYIWDLQDDFTIALHSSSDNLIIDVANLTDQSPFFLSVYDPD NVTQTQKWRYKDSFYRNETNQKYCIDLDHRQIVDGSTIWAYTFNGSPAQQWILSPYSSQFVEQLINLK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17304; Mature: 17173
Theoretical pI: Translated: 4.37; Mature: 4.37
Prosite motif: PS50231 RICIN_B_LECTIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQYIIEYASKRNFVIGVADQMSGQSVVLLDLQKNPDPSKYIWDLQDDFTIALHSSSDNL CCCEEEEECCCCCEEEEECCCCCCCEEEEEEECCCCCCCCEEEECCCCEEEEEECCCCCE IIDVANLTDQSPFFLSVYDPDNVTQTQKWRYKDSFYRNETNQKYCIDLDHRQIVDGSTIW EEEEECCCCCCCEEEEEECCCCCCCCCCEEECCHHHCCCCCCEEEEEECCCEEECCCEEE AYTFNGSPAQQWILSPYSSQFVEQLINLK EEEECCCCHHHEEECCCHHHHHHHHHCCC >Mature Secondary Structure SQYIIEYASKRNFVIGVADQMSGQSVVLLDLQKNPDPSKYIWDLQDDFTIALHSSSDNL CCEEEEECCCCCEEEEECCCCCCCEEEEEEECCCCCCCCEEEECCCCEEEEEECCCCCE IIDVANLTDQSPFFLSVYDPDNVTQTQKWRYKDSFYRNETNQKYCIDLDHRQIVDGSTIW EEEEECCCCCCCEEEEEECCCCCCCCCCEEECCHHHCCCCCCEEEEEECCCEEECCCEEE AYTFNGSPAQQWILSPYSSQFVEQLINLK EEEECCCCHHHEEECCCHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA