| Definition | Burkholderia pseudomallei MSHR346 chromosome I, complete genome. |
|---|---|
| Accession | NC_012695 |
| Length | 4,098,576 |
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The map label for this gene is 237812877
Identifier: 237812877
GI number: 237812877
Start: 2570706
End: 2571848
Strand: Reverse
Name: 237812877
Synonym: GBP346_A2636
Alternate gene names: NA
Gene position: 2571848-2570706 (Counterclockwise)
Preceding gene: 237812878
Following gene: 237812876
Centisome position: 62.75
GC content: 73.49
Gene sequence:
>1143_bases TTGACGATGCCGGTCGATCTGCTCGTGACGGGTTCCGGCTCGCTCGCCGAGGCGGTGCTGTTCGATCTGGTGGCGATGCC CACGCTCGCGGTGCCGATGACGATCGTGGTGGCCGCGCGCAACGCGCAGCGGCTCGCATGGCTCGCGCAGGCCGCCCATG CGCGCGCGTGCGCGCTCGACACGCATCACCGGGTCGCGTGCCGCGCGATCGACTGGGAGGCGCCGGGCGATCTCGCGCGG CTGCTCGCCGAGGCCGCGCCGAAGGTCGTGTTCCACGCCGCGTCGCTGCAATCGATGTGGGAGATCGCGCGCGGCGAGGA CGCATGGGCGGCCGAGATCCGCGCGAGCGGCTACGGCGCGACGCTGCCGCTGCAGCTCGCGCTGGCGCTGCGCGTCGCGC GTGCGATCGGCGAGCGCGCGCCGGCGAGCCGTTTCGTCAACGCGTGCTATCCGGACGCGTCGAACGAGATCCTCGCGCGG CTCGGCCACGACGTGACGTGCGGCATCGGCAACGTCGCGACGCTGGCCGCGACGTATGCTGCGCGACTGGGCGTCGAAGC GCCGCGCCGGCTGCGGATGCTCGCGCATCATCGGCAGGTCGCCGCGGCCATTGCCGGGCAGGGCCGCCTGCATCCGCCGC GCGCATGGATCGACGGCGCGGCGGCGATCGCGCCGGATGCGCTGCCCGACGTGCGGCTGCCCGCCGGAGCATCGCTGAAC CTCGTCACCGGGGCGACGGGCGCGCGGTTGATCGCCGCGCTGCTCGGCCGCGTCGAGCGGTACGCGGGGCACGCGCCCGG CCCGCTCGGTCTTTGCGGCGGCTATCCGGTGACGATCTGCGGCGGCCGGCTCGAGTTGGACTTGCCGCCCGGCCTGACGC TGGAGGAGGCGGTGGCGAGCAATCGCGAATGGGCGCGCGAGGAGGGCGTGTCGATCGACGCGCACGGAAACGTCCGGATC GCGTCGGGGCGGGCGGCGCTCGCGGCGGACGGCGGCGCGGGCGGCGAAGGGAGCGAAAGTAGCGAAAGTAGCGAAAGTAG CGAAAGCGCCGCGCTGCCGCTGTCGTATCGCATTGACGAGATCGAGGACGTCGCTCGTCATCTGATGCGCGTGAAGGCGG ACTTGCAGCGCCGCGCCGCGTGA
Upstream 100 bases:
>100_bases GCGGCGACGTGGGCCCGACGGCCGAGTTGCTGCGGCGTTACGGCCTTTGCGCCGCCGACGTCGCCGCGCGGATCGCGGCC GAGCTCGAGCGGCGGGGGCG
Downstream 100 bases:
>100_bases GCGGCCGCCCGCCGGCCGCCGCGGCGCGGGAATCTGGAACAGGAAGGGATGATGGAATTGAAAAAACGTAGCGATGGCGT GGACCTGCTGCGCGGGATTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 380; Mature: 379
Protein sequence:
>380_residues MTMPVDLLVTGSGSLAEAVLFDLVAMPTLAVPMTIVVAARNAQRLAWLAQAAHARACALDTHHRVACRAIDWEAPGDLAR LLAEAAPKVVFHAASLQSMWEIARGEDAWAAEIRASGYGATLPLQLALALRVARAIGERAPASRFVNACYPDASNEILAR LGHDVTCGIGNVATLAATYAARLGVEAPRRLRMLAHHRQVAAAIAGQGRLHPPRAWIDGAAAIAPDALPDVRLPAGASLN LVTGATGARLIAALLGRVERYAGHAPGPLGLCGGYPVTICGGRLELDLPPGLTLEEAVASNREWAREEGVSIDAHGNVRI ASGRAALAADGGAGGEGSESSESSESSESAALPLSYRIDEIEDVARHLMRVKADLQRRAA
Sequences:
>Translated_380_residues MTMPVDLLVTGSGSLAEAVLFDLVAMPTLAVPMTIVVAARNAQRLAWLAQAAHARACALDTHHRVACRAIDWEAPGDLAR LLAEAAPKVVFHAASLQSMWEIARGEDAWAAEIRASGYGATLPLQLALALRVARAIGERAPASRFVNACYPDASNEILAR LGHDVTCGIGNVATLAATYAARLGVEAPRRLRMLAHHRQVAAAIAGQGRLHPPRAWIDGAAAIAPDALPDVRLPAGASLN LVTGATGARLIAALLGRVERYAGHAPGPLGLCGGYPVTICGGRLELDLPPGLTLEEAVASNREWAREEGVSIDAHGNVRI ASGRAALAADGGAGGEGSESSESSESSESAALPLSYRIDEIEDVARHLMRVKADLQRRAA >Mature_379_residues TMPVDLLVTGSGSLAEAVLFDLVAMPTLAVPMTIVVAARNAQRLAWLAQAAHARACALDTHHRVACRAIDWEAPGDLARL LAEAAPKVVFHAASLQSMWEIARGEDAWAAEIRASGYGATLPLQLALALRVARAIGERAPASRFVNACYPDASNEILARL GHDVTCGIGNVATLAATYAARLGVEAPRRLRMLAHHRQVAAAIAGQGRLHPPRAWIDGAAAIAPDALPDVRLPAGASLNL VTGATGARLIAALLGRVERYAGHAPGPLGLCGGYPVTICGGRLELDLPPGLTLEEAVASNREWAREEGVSIDAHGNVRIA SGRAALAADGGAGGEGSESSESSESSESAALPLSYRIDEIEDVARHLMRVKADLQRRAA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39612; Mature: 39480
Theoretical pI: Translated: 6.74; Mature: 6.74
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTMPVDLLVTGSGSLAEAVLFDLVAMPTLAVPMTIVVAARNAQRLAWLAQAAHARACALD CCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHEEEEECCCHHHHHHHHHHHHHHHHHCC THHRVACRAIDWEAPGDLARLLAEAAPKVVFHAASLQSMWEIARGEDAWAAEIRASGYGA CCCCEEEEEECCCCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCC TLPLQLALALRVARAIGERAPASRFVNACYPDASNEILARLGHDVTCGIGNVATLAATYA CHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCHHHHHHHCCCCEEECCCHHHHHHHHHH ARLGVEAPRRLRMLAHHRQVAAAIAGQGRLHPPRAWIDGAAAIAPDALPDVRLPAGASLN HHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCCHHCCCCCCCCCCCCCCCCEE LVTGATGARLIAALLGRVERYAGHAPGPLGLCGGYPVTICGGRLELDLPPGLTLEEAVAS EEECCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEECCEEEEECCCCCCHHHHHHC NREWAREEGVSIDAHGNVRIASGRAALAADGGAGGEGSESSESSESSESAALPLSYRIDE CHHHHHHCCCEEECCCCEEEECCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCEECHHH IEDVARHLMRVKADLQRRAA HHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure TMPVDLLVTGSGSLAEAVLFDLVAMPTLAVPMTIVVAARNAQRLAWLAQAAHARACALD CCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHEEEEECCCHHHHHHHHHHHHHHHHHCC THHRVACRAIDWEAPGDLARLLAEAAPKVVFHAASLQSMWEIARGEDAWAAEIRASGYGA CCCCEEEEEECCCCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCC TLPLQLALALRVARAIGERAPASRFVNACYPDASNEILARLGHDVTCGIGNVATLAATYA CHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCHHHHHHHCCCCEEECCCHHHHHHHHHH ARLGVEAPRRLRMLAHHRQVAAAIAGQGRLHPPRAWIDGAAAIAPDALPDVRLPAGASLN HHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCCHHCCCCCCCCCCCCCCCCEE LVTGATGARLIAALLGRVERYAGHAPGPLGLCGGYPVTICGGRLELDLPPGLTLEEAVAS EEECCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEECCEEEEECCCCCCHHHHHHC NREWAREEGVSIDAHGNVRIASGRAALAADGGAGGEGSESSESSESSESAALPLSYRIDE CHHHHHHCCCEEECCCCEEEECCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCEECHHH IEDVARHLMRVKADLQRRAA HHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA