| Definition | Burkholderia pseudomallei MSHR346 chromosome I, complete genome. |
|---|---|
| Accession | NC_012695 |
| Length | 4,098,576 |
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The map label for this gene is argH2 [H]
Identifier: 237812870
GI number: 237812870
Start: 2561277
End: 2563991
Strand: Reverse
Name: argH2 [H]
Synonym: GBP346_A2629
Alternate gene names: 237812870
Gene position: 2563991-2561277 (Counterclockwise)
Preceding gene: 237812871
Following gene: 237812869
Centisome position: 62.56
GC content: 70.64
Gene sequence:
>2715_bases ATGACGGGCATCTTTGTCTTCATCGAGAGCAACACGACGGGCACGGGCGAGCTCCTCGTGCGCAAGGCGCTGCAACGCGG CCTCACGCCTTACTTTCTCACCGCGAACCGCGGCAAGTATCCGTTTCTCGACACGATCCGGGTCGTGACGATCTCGCTCG ACACGAGCGACGCCGACCGGATCCACCGCTTCGTTTCGTCGCTCGACGGCGTGGCGGGCGTGATGTCGTCGTCCGAGTAT TTCATCGAAGTCGCGAGCGAAGTCGCGCGGCGGCTCGGGTTGCCGACCGCGAACACCGAAGCGACGCGTGTGTGCCGCGA CAAGAAGCATCTCGCGCGGACGCTCGCCGAGCACGGGATAGACGTGCCGCGCACGCACGCGCTTGCGCTCGACGCCGACG CCGACGCCGACGCCGATGCCGATGCCGATGCCGTCGCGCTGTCCGCGCTCGACGGGCTCGCCTATCCGGTTGTCGTCAAG CCGAGGATGGGCTCCGGCAGCGTCGGCGTGCGACTGTGCGCGAGCGTCGACGAGGTGGCCGAGCACTGCGCGGCGCTGCG GCGCGCGGGCACGCGCGCGGCGCTCGTGCAGGCCTATGTCGAAGGCGACGAGTATTCGGTCGAGACACTGACGGTCGCGC GCAGCACGCAGATCGTCGGCATCGTCAGAAAACGCCTCGGGCGCGAGCCGCACTTCGTCGAGATCGGTCATGACTATCCG GCGCCGTTGTCGAGCCCGCAGCGCGAGCGCATCGAGCGCACGGTGCTGCGCGCGCTCGAGGCGCTCGGCTACGCGTTCGG GCCCGCGCACACCGAGCTGCGCGTGCGCGGCGACACGGTCACGATCATCGAGATCAATCCGCGCCTCGCGGGCGGTCTGA TTCCGGTGCTGCTCGGCGAGGTATTCGACGTCGACCTGCTCGACCACGTGCTCGACATGTGGCTCGGCGTGGCGGCGTTT GCCGATCTCACCGCGAAACGCTACGGCGCGATCCGCTTCGCGCTGCCGGCGCGCGAGGGCGTGCTGCGCGGCCCGCTCGC GCTGCCGGCCGACATCGCCGCGCGGCCCGAGCTCCGGCATTTCCATCCGATCGCGCAGCCGGGCGACGCGCTGCGGCTCG AAGGCAGCTTCCGCGACCGCATCGCCGCCGTCGTCTGCGCGGGCGATCATCGCGAATCGGTCGAGGCGCTCGCCGAGCGT GCGGTGGCCGGGCTGAGCATCGACATCGGCGACGACGCGCGCGCAGCCGCGTTAAACGAGTCGAACGAGTCGAACGGCGC GAACGCGGCGACGCCCGGCCTGCCGCCTCGCCTGCAGGCGATCGTCTACGGCGACGGCGCGAGCGAGGCCCCACTCGCGG AACTCGACCATCTGTTCGATCTGAACGAGGCGCATCTCGTCATGCTCGGGGCGACGCGCATCGTCGCGCCCGAACGGGTC CGGCCGCTGCTCGACGCCCATCGCCGGCTGCGGCGCGCGGGCTACGCGCCGCTGCTCGCGCGGCCGAGGCCGCGGGGCCT GTACATGCTCGTCGAGGCATACCTGATCGAGACGCTCGGCGAGGATGTCGGCGGCGTGCTGCAGACGGGCCGCTCGCGCA ACGACATCAACGCGGCGACGACGAAGCTGCATTTGCGCGACGCGACGTCGCGCGCGTTCGACGCGCTATGGCGCTTGCGG CGCAGCCTCGTCTTCAAGGCGTCGGCGAACGTCGACTGTGCATTTCCGATCTACAGCCAGTACCAGCCGGCGCTGCCGGG CACGCTCGCGCATCAGCTGCTCGCGTTCGACGGCGCGCTCGCGCACGAAACCCATGCGCTGTTCGCGTTGTTCCAGCACA TCGATGTCTGCCCGCTCGGCGCCGGCGCGGGCGGCGGCACGACGCTGCCGATCGATCCGGAGTTCGTCTGCCGGCTGCTC GGCTTCGAGCAGCCGGCGCCGAACAGCCTCGATGCGGTGGCGAACCGCAGCGGCGTCGTCCATTTCCTGTCGGCGATGAA CGCGATCGGCCTCGTGCTGTCGCGTCTCGCGCAGGACCTGCAGATCTGGACGACGGCGGAGTTCGCGCTCGTGTCGCTGC CCGCCGCGCTGACCGGCGGCTCGTCGATGCTGCCGCAAAAGAAAAACCCGTTTCTCGTCGAATTCGTGAAGAGCCGCGCG GGCGTGCCGTTCGGCGCGCTCGCGAGTTGCTCGGCGGCGCTCGGCAAGACGCCGTACACCAATTCGTTCGAGGCCGGCTC GCCGATGAACGGGCTGATCGCGCAGGCGTGCGCGGCGATCGAGGACGCGGCGGCGGTCGCCGTGCTGCTGATCGACGGGC TCGAAGCGGCGCAGGCACGCATCGACGCCCATCTGAGGGACACGGGCGTGGTCGCGATGGCGGTGGCCGAATCGCTCGTC GTTCGCCGGTCGATCGATTTTCGCTCCGCGCACACGCGGGTTGCGCAGGCGGTGCGGGACAGCGCCGCGCAGGGGCGCTC GAGCCACGATGCGCTCGCCGCGCTCGATCCCGATTTTGTCTCGCGCGCGCCGCTGGAGTGGGCGCGCAGCCACCGTTTCG GCGGCGGCCCGGGCGCGGCCGACCTGAACCATGGCGTCGCGCGCGCGTGCCGTGCGCTCGCCGACGACGAGGCCGTGTTT CGCCGCAAGCAGGACGTGTGGCGGGAGGCGGAACAGATGCGGCGGCTCGCGGCGCAGCAACTGGCGGGCGATTGA
Upstream 100 bases:
>100_bases CTCGTCGCGCTCCACGCGTGACGCGCGGCGCGCGGCCGGCATTCGCCCGGCGCCCGGAACGGGCGGCGGGCTCCACCTTC ATCGACGTTTCGCGGAAAAC
Downstream 100 bases:
>100_bases GCCGGCCCGTGCGCGGCATTCGGCCGTCGCGCGCGCCGCCTCCGGCGCGCGGCCCCGCGTCGACGACACGGCGGGCGTGT GCCGTCGCGGTTCGGGCAGA
Product: argininosuccinate lyase
Products: NA
Alternate protein names: ASAL 2; Arginosuccinase 2 [H]
Number of amino acids: Translated: 904; Mature: 903
Protein sequence:
>904_residues MTGIFVFIESNTTGTGELLVRKALQRGLTPYFLTANRGKYPFLDTIRVVTISLDTSDADRIHRFVSSLDGVAGVMSSSEY FIEVASEVARRLGLPTANTEATRVCRDKKHLARTLAEHGIDVPRTHALALDADADADADADADAVALSALDGLAYPVVVK PRMGSGSVGVRLCASVDEVAEHCAALRRAGTRAALVQAYVEGDEYSVETLTVARSTQIVGIVRKRLGREPHFVEIGHDYP APLSSPQRERIERTVLRALEALGYAFGPAHTELRVRGDTVTIIEINPRLAGGLIPVLLGEVFDVDLLDHVLDMWLGVAAF ADLTAKRYGAIRFALPAREGVLRGPLALPADIAARPELRHFHPIAQPGDALRLEGSFRDRIAAVVCAGDHRESVEALAER AVAGLSIDIGDDARAAALNESNESNGANAATPGLPPRLQAIVYGDGASEAPLAELDHLFDLNEAHLVMLGATRIVAPERV RPLLDAHRRLRRAGYAPLLARPRPRGLYMLVEAYLIETLGEDVGGVLQTGRSRNDINAATTKLHLRDATSRAFDALWRLR RSLVFKASANVDCAFPIYSQYQPALPGTLAHQLLAFDGALAHETHALFALFQHIDVCPLGAGAGGGTTLPIDPEFVCRLL GFEQPAPNSLDAVANRSGVVHFLSAMNAIGLVLSRLAQDLQIWTTAEFALVSLPAALTGGSSMLPQKKNPFLVEFVKSRA GVPFGALASCSAALGKTPYTNSFEAGSPMNGLIAQACAAIEDAAAVAVLLIDGLEAAQARIDAHLRDTGVVAMAVAESLV VRRSIDFRSAHTRVAQAVRDSAAQGRSSHDALAALDPDFVSRAPLEWARSHRFGGGPGAADLNHGVARACRALADDEAVF RRKQDVWREAEQMRRLAAQQLAGD
Sequences:
>Translated_904_residues MTGIFVFIESNTTGTGELLVRKALQRGLTPYFLTANRGKYPFLDTIRVVTISLDTSDADRIHRFVSSLDGVAGVMSSSEY FIEVASEVARRLGLPTANTEATRVCRDKKHLARTLAEHGIDVPRTHALALDADADADADADADAVALSALDGLAYPVVVK PRMGSGSVGVRLCASVDEVAEHCAALRRAGTRAALVQAYVEGDEYSVETLTVARSTQIVGIVRKRLGREPHFVEIGHDYP APLSSPQRERIERTVLRALEALGYAFGPAHTELRVRGDTVTIIEINPRLAGGLIPVLLGEVFDVDLLDHVLDMWLGVAAF ADLTAKRYGAIRFALPAREGVLRGPLALPADIAARPELRHFHPIAQPGDALRLEGSFRDRIAAVVCAGDHRESVEALAER AVAGLSIDIGDDARAAALNESNESNGANAATPGLPPRLQAIVYGDGASEAPLAELDHLFDLNEAHLVMLGATRIVAPERV RPLLDAHRRLRRAGYAPLLARPRPRGLYMLVEAYLIETLGEDVGGVLQTGRSRNDINAATTKLHLRDATSRAFDALWRLR RSLVFKASANVDCAFPIYSQYQPALPGTLAHQLLAFDGALAHETHALFALFQHIDVCPLGAGAGGGTTLPIDPEFVCRLL GFEQPAPNSLDAVANRSGVVHFLSAMNAIGLVLSRLAQDLQIWTTAEFALVSLPAALTGGSSMLPQKKNPFLVEFVKSRA GVPFGALASCSAALGKTPYTNSFEAGSPMNGLIAQACAAIEDAAAVAVLLIDGLEAAQARIDAHLRDTGVVAMAVAESLV VRRSIDFRSAHTRVAQAVRDSAAQGRSSHDALAALDPDFVSRAPLEWARSHRFGGGPGAADLNHGVARACRALADDEAVF RRKQDVWREAEQMRRLAAQQLAGD >Mature_903_residues TGIFVFIESNTTGTGELLVRKALQRGLTPYFLTANRGKYPFLDTIRVVTISLDTSDADRIHRFVSSLDGVAGVMSSSEYF IEVASEVARRLGLPTANTEATRVCRDKKHLARTLAEHGIDVPRTHALALDADADADADADADAVALSALDGLAYPVVVKP RMGSGSVGVRLCASVDEVAEHCAALRRAGTRAALVQAYVEGDEYSVETLTVARSTQIVGIVRKRLGREPHFVEIGHDYPA PLSSPQRERIERTVLRALEALGYAFGPAHTELRVRGDTVTIIEINPRLAGGLIPVLLGEVFDVDLLDHVLDMWLGVAAFA DLTAKRYGAIRFALPAREGVLRGPLALPADIAARPELRHFHPIAQPGDALRLEGSFRDRIAAVVCAGDHRESVEALAERA VAGLSIDIGDDARAAALNESNESNGANAATPGLPPRLQAIVYGDGASEAPLAELDHLFDLNEAHLVMLGATRIVAPERVR PLLDAHRRLRRAGYAPLLARPRPRGLYMLVEAYLIETLGEDVGGVLQTGRSRNDINAATTKLHLRDATSRAFDALWRLRR SLVFKASANVDCAFPIYSQYQPALPGTLAHQLLAFDGALAHETHALFALFQHIDVCPLGAGAGGGTTLPIDPEFVCRLLG FEQPAPNSLDAVANRSGVVHFLSAMNAIGLVLSRLAQDLQIWTTAEFALVSLPAALTGGSSMLPQKKNPFLVEFVKSRAG VPFGALASCSAALGKTPYTNSFEAGSPMNGLIAQACAAIEDAAAVAVLLIDGLEAAQARIDAHLRDTGVVAMAVAESLVV RRSIDFRSAHTRVAQAVRDSAAQGRSSHDALAALDPDFVSRAPLEWARSHRFGGGPGAADLNHGVARACRALADDEAVFR RKQDVWREAEQMRRLAAQQLAGD
Specific function: Arginine biosynthesis; eighth (last) step. [C]
COG id: COG0165
COG function: function code E; Argininosuccinate lyase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ATP-grasp domain [H]
Homologues:
Organism=Homo sapiens, GI31541964, Length=358, Percent_Identity=31.8435754189944, Blast_Score=146, Evalue=1e-34, Organism=Homo sapiens, GI68303542, Length=358, Percent_Identity=31.8435754189944, Blast_Score=146, Evalue=1e-34, Organism=Homo sapiens, GI68303547, Length=371, Percent_Identity=31.5363881401617, Blast_Score=141, Evalue=2e-33, Organism=Homo sapiens, GI68303549, Length=368, Percent_Identity=29.6195652173913, Blast_Score=119, Evalue=2e-26, Organism=Escherichia coli, GI1790398, Length=325, Percent_Identity=36.3076923076923, Blast_Score=167, Evalue=2e-42, Organism=Saccharomyces cerevisiae, GI6321806, Length=333, Percent_Identity=30.03003003003, Blast_Score=138, Evalue=3e-33, Organism=Drosophila melanogaster, GI221473854, Length=328, Percent_Identity=31.0975609756098, Blast_Score=137, Evalue=4e-32, Organism=Drosophila melanogaster, GI78706858, Length=328, Percent_Identity=31.0975609756098, Blast_Score=137, Evalue=4e-32,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009049 - InterPro: IPR011761 - InterPro: IPR003806 - InterPro: IPR013815 - InterPro: IPR013816 - InterPro: IPR005479 - InterPro: IPR003031 - InterPro: IPR000362 - InterPro: IPR008948 - InterPro: IPR022761 [H]
Pfam domain/function: PF02655 ATP-grasp_3; PF00206 Lyase_1 [H]
EC number: =4.3.2.1 [H]
Molecular weight: Translated: 96692; Mature: 96561
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: PS50975 ATP_GRASP ; PS00867 CPSASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTGIFVFIESNTTGTGELLVRKALQRGLTPYFLTANRGKYPFLDTIRVVTISLDTSDADR CCEEEEEEECCCCCHHHHHHHHHHHHCCCCEEEECCCCCCCCCCEEEEEEEEECCCCHHH IHRFVSSLDGVAGVMSSSEYFIEVASEVARRLGLPTANTEATRVCRDKKHLARTLAEHGI HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCC DVPRTHALALDADADADADADADAVALSALDGLAYPVVVKPRMGSGSVGVRLCASVDEVA CCCCCEEEEEECCCCCCCCCCHHHHHHHHHCCCCCCEEEECCCCCCCCHHHHHHHHHHHH EHCAALRRAGTRAALVQAYVEGDEYSVETLTVARSTQIVGIVRKRLGREPHFVEIGHDYP HHHHHHHHCCCHHHHHHHHHCCCCCEEEEEEEEHHHHHHHHHHHHHCCCCCEEECCCCCC APLSSPQRERIERTVLRALEALGYAFGPAHTELRVRGDTVTIIEINPRLAGGLIPVLLGE CCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCEEEEEEECCHHHHHHHHHHHHH VFDVDLLDHVLDMWLGVAAFADLTAKRYGAIRFALPAREGVLRGPLALPADIAARPELRH HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCCCCCCCCCCCCCCCCCCCHH FHPIAQPGDALRLEGSFRDRIAAVVCAGDHRESVEALAERAVAGLSIDIGDDARAAALNE CCCCCCCCCCEEECCCHHHCEEEEEECCCCHHHHHHHHHHHHHCCEEECCCCCHHHHCCC SNESNGANAATPGLPPRLQAIVYGDGASEAPLAELDHLFDLNEAHLVMLGATRIVAPERV CCCCCCCCCCCCCCCCCEEEEEECCCCCCCCHHHHHHHHCCCCCEEEEEECHHHCCHHHH RPLLDAHRRLRRAGYAPLLARPRPRGLYMLVEAYLIETLGEDVGGVLQTGRSRNDINAAT HHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHH TKLHLRDATSRAFDALWRLRRSLVFKASANVDCAFPIYSQYQPALPGTLAHQLLAFDGAL EEEEEHHHHHHHHHHHHHHHHHHEEEECCCCEEECCCHHCCCCCCCHHHHHHHHHHCCHH AHETHALFALFQHIDVCPLGAGAGGGTTLPIDPEFVCRLLGFEQPAPNSLDAVANRSGVV HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCHHHHHCCCCHH HFLSAMNAIGLVLSRLAQDLQIWTTAEFALVSLPAALTGGSSMLPQKKNPFLVEFVKSRA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCCCCCCCHHHHHHHHHC GVPFGALASCSAALGKTPYTNSFEAGSPMNGLIAQACAAIEDAAAVAVLLIDGLEAAQAR CCCHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHH IDAHLRDTGVVAMAVAESLVVRRSIDFRSAHTRVAQAVRDSAAQGRSSHDALAALDPDFV HHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCHHHH SRAPLEWARSHRFGGGPGAADLNHGVARACRALADDEAVFRRKQDVWREAEQMRRLAAQQ HCCCHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH LAGD HCCC >Mature Secondary Structure TGIFVFIESNTTGTGELLVRKALQRGLTPYFLTANRGKYPFLDTIRVVTISLDTSDADR CEEEEEEECCCCCHHHHHHHHHHHHCCCCEEEECCCCCCCCCCEEEEEEEEECCCCHHH IHRFVSSLDGVAGVMSSSEYFIEVASEVARRLGLPTANTEATRVCRDKKHLARTLAEHGI HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCC DVPRTHALALDADADADADADADAVALSALDGLAYPVVVKPRMGSGSVGVRLCASVDEVA CCCCCEEEEEECCCCCCCCCCHHHHHHHHHCCCCCCEEEECCCCCCCCHHHHHHHHHHHH EHCAALRRAGTRAALVQAYVEGDEYSVETLTVARSTQIVGIVRKRLGREPHFVEIGHDYP HHHHHHHHCCCHHHHHHHHHCCCCCEEEEEEEEHHHHHHHHHHHHHCCCCCEEECCCCCC APLSSPQRERIERTVLRALEALGYAFGPAHTELRVRGDTVTIIEINPRLAGGLIPVLLGE CCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCEEEEEEECCHHHHHHHHHHHHH VFDVDLLDHVLDMWLGVAAFADLTAKRYGAIRFALPAREGVLRGPLALPADIAARPELRH HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCCCCCCCCCCCCCCCCCCCHH FHPIAQPGDALRLEGSFRDRIAAVVCAGDHRESVEALAERAVAGLSIDIGDDARAAALNE CCCCCCCCCCEEECCCHHHCEEEEEECCCCHHHHHHHHHHHHHCCEEECCCCCHHHHCCC SNESNGANAATPGLPPRLQAIVYGDGASEAPLAELDHLFDLNEAHLVMLGATRIVAPERV CCCCCCCCCCCCCCCCCEEEEEECCCCCCCCHHHHHHHHCCCCCEEEEEECHHHCCHHHH RPLLDAHRRLRRAGYAPLLARPRPRGLYMLVEAYLIETLGEDVGGVLQTGRSRNDINAAT HHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHH TKLHLRDATSRAFDALWRLRRSLVFKASANVDCAFPIYSQYQPALPGTLAHQLLAFDGAL EEEEEHHHHHHHHHHHHHHHHHHEEEECCCCEEECCCHHCCCCCCCHHHHHHHHHHCCHH AHETHALFALFQHIDVCPLGAGAGGGTTLPIDPEFVCRLLGFEQPAPNSLDAVANRSGVV HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCHHHHHCCCCHH HFLSAMNAIGLVLSRLAQDLQIWTTAEFALVSLPAALTGGSSMLPQKKNPFLVEFVKSRA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCCCCCCCHHHHHHHHHC GVPFGALASCSAALGKTPYTNSFEAGSPMNGLIAQACAAIEDAAAVAVLLIDGLEAAQAR CCCHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHH IDAHLRDTGVVAMAVAESLVVRRSIDFRSAHTRVAQAVRDSAAQGRSSHDALAALDPDFV HHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCHHHH SRAPLEWARSHRFGGGPGAADLNHGVARACRALADDEAVFRRKQDVWREAEQMRRLAAQQ HCCCHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH LAGD HCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11214968 [H]