| Definition | Burkholderia pseudomallei MSHR346 chromosome I, complete genome. |
|---|---|
| Accession | NC_012695 |
| Length | 4,098,576 |
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The map label for this gene is 237812862
Identifier: 237812862
GI number: 237812862
Start: 2556313
End: 2556552
Strand: Direct
Name: 237812862
Synonym: GBP346_A2621
Alternate gene names: NA
Gene position: 2556313-2556552 (Clockwise)
Preceding gene: 237812860
Following gene: 237812866
Centisome position: 62.37
GC content: 67.92
Gene sequence:
>240_bases ATGCATGACGGCGTACGGCGAAGCGCAAGACGCAGCGCGCGCCGAGCGCGACGCCGATGCCAGCGCAACCGCGCCGAAAA AAGCAATGCAAGGCATACCGCGGCGCATGCGTGCACCGCGAAGAAGCGCTCCGGCCCGATTCCGGCCATGCCGCTCGAAC GCCGCATGGCCGCGCACGGTCGATCGGCGATGACGAACGGCCCGAGTCCCGCCGATGTTGGTCGGCACATCGAAACGTGA
Upstream 100 bases:
>100_bases ATGAAATAACGATCGTTACGGTAACGAACGTTATGCGATGTATTGATCGGAGTCAATCGAACAGACGCTCCAAACGCGGT GCAAGCCTCGCCGCCCGCGC
Downstream 100 bases:
>100_bases ATCGCTCGCTTCGCCGCGTGGCGCGGCGTTCCGCGCGCGGCGCGTCCCGCGTCGCGCCGCCCCATGCACGCCCGAGGCGA CATCTCGGTACGCGCGGCGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 79; Mature: 79
Protein sequence:
>79_residues MHDGVRRSARRSARRARRRCQRNRAEKSNARHTAAHACTAKKRSGPIPAMPLERRMAAHGRSAMTNGPSPADVGRHIET
Sequences:
>Translated_79_residues MHDGVRRSARRSARRARRRCQRNRAEKSNARHTAAHACTAKKRSGPIPAMPLERRMAAHGRSAMTNGPSPADVGRHIET >Mature_79_residues MHDGVRRSARRSARRARRRCQRNRAEKSNARHTAAHACTAKKRSGPIPAMPLERRMAAHGRSAMTNGPSPADVGRHIET
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8793; Mature: 8793
Theoretical pI: Translated: 12.56; Mature: 12.56
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 5.1 %Met (Translated Protein) 7.6 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 5.1 %Met (Mature Protein) 7.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHDGVRRSARRSARRARRRCQRNRAEKSNARHTAAHACTAKKRSGPIPAMPLERRMAAHG CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHC RSAMTNGPSPADVGRHIET CCCCCCCCCHHHCCCCCCC >Mature Secondary Structure MHDGVRRSARRSARRARRRCQRNRAEKSNARHTAAHACTAKKRSGPIPAMPLERRMAAHG CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHC RSAMTNGPSPADVGRHIET CCCCCCCCCHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA