| Definition | Burkholderia pseudomallei MSHR346 chromosome I, complete genome. |
|---|---|
| Accession | NC_012695 |
| Length | 4,098,576 |
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The map label for this gene is 237812818
Identifier: 237812818
GI number: 237812818
Start: 2508819
End: 2509940
Strand: Reverse
Name: 237812818
Synonym: GBP346_A2572
Alternate gene names: NA
Gene position: 2509940-2508819 (Counterclockwise)
Preceding gene: 237812825
Following gene: 237812817
Centisome position: 61.24
GC content: 73.17
Gene sequence:
>1122_bases TTGCGCGGGCGAGGACGGGCGCGGCGGTTCGCGGCGCGCGATGCCGGCGTGAGCCGGCCCGTGCCGGCCCGGTGGGGCGC GGCGACGGCGCTCGATTATAGCGTGACATCGGGTGGCTCGACGCGCGGCGCGCGTGCCGCGGCGCCGTCCGGGGAAGGAA AGACGAGGTTCGGTTTGCAAGAGAATGAACGACGCAGCGCCGGCTGGCCGACGCTCGCGATTCTGGTTGGCGCATCGGTA TGGGGCCTGATCTGGTATCCGCTGCGCCTGCTGGCGGCGCTCGGCGTGACGGGCACGGTGGCGAGCGCGGCGACGAGCAT CGTCGCGTGCGCGTTCGTGCTGATCGTGCGGCGCAAGTCGATCGCGACCGTGCGCCGGCATTGGCTGCTGCCCGCGCTGG GCGTTGCCGCGGGCGTGACGAACCTCGGCTTCGTGTGGGGCACGATCCACGGCGAGGTGCTGCGCGTGATGCTGCTTTTC TATCTGACGCCCGCGTGGACCGCGATCTGCGCGCACTTCATCCTGCGCGAGCGGCTGACGGCGGCGGGCGCGGCGCTCGC CGCGCTGTCGCTCGGCGGCGCGGTGCTGATGCTGTGGTCGCCCCGGCTCGGCGTGCCGCTGCCGTCGAACCCGGCCGAAT GGGCGGGGCTCGCGGCCGGAATGAGCTTCGCGATGAGCAACGTGCTCGTCGTCAAGGCGAGCCGCGAGCTGCCGCGGATG AAGCCCGAGATGCGCACGGCGACGCTGTTCGCCGGCGCGGCCGCGATGGGCGTCGCCGCCGCGTTCGTCGAGGGCCTGCC GCCGCTGCCGGCGGGCGGTGAGCTCGGTCGCGCGGCGCTGCTCGTCGTCGGGATCGGCGTGACGGTCGCGGCGAACAACA TGCTCGTCCAGCACGGCCTCGCGCGCGTGCCGGCGAACCGCGCGTCGATCATCATGCTGTTCGAGATCGTCGTCACGGCG CTCACCGCGTGGCTTTTTGCCAACGAAGTGCCGAGCGCGCGCGAATGGGCGGGCGGCCTGTGCATCGTCGTCGCGACCCT GCTGTCGAGCCGCGTGCATCGCGCCCGCCCGGCCGAAGACGAACCGCGCGAGCCGCGGGACGGCGCGCGCGCGATGGTAT GA
Upstream 100 bases:
>100_bases GAGGATTCACGGGCGTGGGGCTCACGGAGCCGGTAGGTGGCCGATCGGACGGGCCGGTTTAAGCGAAGCGGCGCAAGGCG GCGGCGCGGCTGGCGCCGCC
Downstream 100 bases:
>100_bases TTGGCCCCATTCGCGGGGCCGACTGCTTGACAGCACGGCCCCGTTTTTCGAATCTTGGGCGTGCGGCGCGCGCGCGGGCC TTCCGGCCGAATCGCGGCGC
Product: integral membrane protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 373; Mature: 373
Protein sequence:
>373_residues MRGRGRARRFAARDAGVSRPVPARWGAATALDYSVTSGGSTRGARAAAPSGEGKTRFGLQENERRSAGWPTLAILVGASV WGLIWYPLRLLAALGVTGTVASAATSIVACAFVLIVRRKSIATVRRHWLLPALGVAAGVTNLGFVWGTIHGEVLRVMLLF YLTPAWTAICAHFILRERLTAAGAALAALSLGGAVLMLWSPRLGVPLPSNPAEWAGLAAGMSFAMSNVLVVKASRELPRM KPEMRTATLFAGAAAMGVAAAFVEGLPPLPAGGELGRAALLVVGIGVTVAANNMLVQHGLARVPANRASIIMLFEIVVTA LTAWLFANEVPSAREWAGGLCIVVATLLSSRVHRARPAEDEPREPRDGARAMV
Sequences:
>Translated_373_residues MRGRGRARRFAARDAGVSRPVPARWGAATALDYSVTSGGSTRGARAAAPSGEGKTRFGLQENERRSAGWPTLAILVGASV WGLIWYPLRLLAALGVTGTVASAATSIVACAFVLIVRRKSIATVRRHWLLPALGVAAGVTNLGFVWGTIHGEVLRVMLLF YLTPAWTAICAHFILRERLTAAGAALAALSLGGAVLMLWSPRLGVPLPSNPAEWAGLAAGMSFAMSNVLVVKASRELPRM KPEMRTATLFAGAAAMGVAAAFVEGLPPLPAGGELGRAALLVVGIGVTVAANNMLVQHGLARVPANRASIIMLFEIVVTA LTAWLFANEVPSAREWAGGLCIVVATLLSSRVHRARPAEDEPREPRDGARAMV >Mature_373_residues MRGRGRARRFAARDAGVSRPVPARWGAATALDYSVTSGGSTRGARAAAPSGEGKTRFGLQENERRSAGWPTLAILVGASV WGLIWYPLRLLAALGVTGTVASAATSIVACAFVLIVRRKSIATVRRHWLLPALGVAAGVTNLGFVWGTIHGEVLRVMLLF YLTPAWTAICAHFILRERLTAAGAALAALSLGGAVLMLWSPRLGVPLPSNPAEWAGLAAGMSFAMSNVLVVKASRELPRM KPEMRTATLFAGAAAMGVAAAFVEGLPPLPAGGELGRAALLVVGIGVTVAANNMLVQHGLARVPANRASIIMLFEIVVTA LTAWLFANEVPSAREWAGGLCIVVATLLSSRVHRARPAEDEPREPRDGARAMV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39111; Mature: 39111
Theoretical pI: Translated: 11.99; Mature: 11.99
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRGRGRARRFAARDAGVSRPVPARWGAATALDYSVTSGGSTRGARAAAPSGEGKTRFGLQ CCCCCHHHHHHHHHCCCCCCCCCCCCCHHEEEEEECCCCCCCCCCCCCCCCCCCEECCCC ENERRSAGWPTLAILVGASVWGLIWYPLRLLAALGVTGTVASAATSIVACAFVLIVRRKS CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH IATVRRHWLLPALGVAAGVTNLGFVWGTIHGEVLRVMLLFYLTPAWTAICAHFILRERLT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AAGAALAALSLGGAVLMLWSPRLGVPLPSNPAEWAGLAAGMSFAMSNVLVVKASRELPRM HHHHHHHHHHHCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHCEEEEECCHHCCCC KPEMRTATLFAGAAAMGVAAAFVEGLPPLPAGGELGRAALLVVGIGVTVAANNMLVQHGL CHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHEEECCHHHHCCHHHHHHHH ARVPANRASIIMLFEIVVTALTAWLFANEVPSAREWAGGLCIVVATLLSSRVHRARPAED HHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCHHHHHHHHHHHHHHHHCCCCCC EPREPRDGARAMV CCCCCCCCCCCCC >Mature Secondary Structure MRGRGRARRFAARDAGVSRPVPARWGAATALDYSVTSGGSTRGARAAAPSGEGKTRFGLQ CCCCCHHHHHHHHHCCCCCCCCCCCCCHHEEEEEECCCCCCCCCCCCCCCCCCCEECCCC ENERRSAGWPTLAILVGASVWGLIWYPLRLLAALGVTGTVASAATSIVACAFVLIVRRKS CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH IATVRRHWLLPALGVAAGVTNLGFVWGTIHGEVLRVMLLFYLTPAWTAICAHFILRERLT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AAGAALAALSLGGAVLMLWSPRLGVPLPSNPAEWAGLAAGMSFAMSNVLVVKASRELPRM HHHHHHHHHHHCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHCEEEEECCHHCCCC KPEMRTATLFAGAAAMGVAAAFVEGLPPLPAGGELGRAALLVVGIGVTVAANNMLVQHGL CHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHEEECCHHHHCCHHHHHHHH ARVPANRASIIMLFEIVVTALTAWLFANEVPSAREWAGGLCIVVATLLSSRVHRARPAED HHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCHHHHHHHHHHHHHHHHCCCCCC EPREPRDGARAMV CCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA