| Definition | Burkholderia pseudomallei MSHR346 chromosome I, complete genome. |
|---|---|
| Accession | NC_012695 |
| Length | 4,098,576 |
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The map label for this gene is cdsA [H]
Identifier: 237812803
GI number: 237812803
Start: 2489803
End: 2490624
Strand: Reverse
Name: cdsA [H]
Synonym: GBP346_A2557
Alternate gene names: 237812803
Gene position: 2490624-2489803 (Counterclockwise)
Preceding gene: 237812804
Following gene: 237812802
Centisome position: 60.77
GC content: 72.63
Gene sequence:
>822_bases ATGCTGAAGACCCGTGTCATCACGGCGGTCGTGCTGCTGGCGGTGCTGCTGCCCGTGACGCTGTTCGCGCCGCTCGCCGC GTTCGGCGCGCTGATCGCGCTCGCGCTCGTATTCGCCGCGTGGGAGTGGGGGCGGCTGTTGAAGCTGGGCGGCGCGGGCC CGCTCGCGTACGCGGCCGTCGCGGCGCTCGCGCTCGGCGCGAGCACGCGGCTCGGCATCGGCGCGGCCGCCGCGCGGCCG CTGTTCGCGGCCGCGGGGGTGTTCTGGCTGCTGGCGGGCCCGTACGCGCTCTGGCGCAAGCCCGCGCTCGCCGAGCGCGC GTGGAAGCCGTTCCTGCTCGTCGCGGGCCTCGTCGTCTTCTCGGCGTGCTGGCACGCGCTCGTCGCCGCGCGCGCGCAAG GCGTACCCTTCGTGTTGTCGCTGTTGGTAGTGGTATGGCTCGCCGATATCGGCGCATACTTCGCCGGAAAGGCGTTCGGC AAGCACAAGCTCGCGCCGTCGGTGAGCCCCGGCAAAACCTGGGAAGGCGCGGCGGGCGGCTGGCTCGCGGTGATGATCGT CGCCGGCGCGGCTGTCGCGGCGCACGCCTTCGAACCGACCCTTTATTCGACGTTCGTCGCGCGGTACGGTGCGGCGGGCG CATTCGCGGCGCTCACGGTGCTCGTCGCGTTCAGCGTGGTCGGCGACCTGTTCGAGTCGATGCTCAAGCGCCAGGCCGGC GTGAAAGATTCGAGCGGCCTCCTGCCGGGCCACGGCGGCGTGCTCGACCGCGTCGACGCGCTGCTGCCCGTGCTGCCGCT CGCGATGCTGCTGCTCGGTTAA
Upstream 100 bases:
>100_bases CGCTCGCCGAAGCGCTCGCGTCGTACACGCACCGCGAACGCCGCTTCGGCCGCACGAGCGCGCAGCTCGAACCCCAGGCC CAGGACGCCGATTCCCTTTC
Downstream 100 bases:
>100_bases AACTAGACCCTATTATGCAAAAACGTCTGACATTGCTCGGTTCGACGGGCTCGATCGGAGACAGCACGCTCGACGTCGTC GCGCGTCATCCGGAACGCTT
Product: phosphatidate cytidylyltransferase
Products: NA
Alternate protein names: CDP-DAG synthase; CDP-DG synthase; CDP-diacylglycerol synthase; CDS; CDP-diglyceride pyrophosphorylase; CDP-diglyceride synthase; CTP:phosphatidate cytidylyltransferase [H]
Number of amino acids: Translated: 273; Mature: 273
Protein sequence:
>273_residues MLKTRVITAVVLLAVLLPVTLFAPLAAFGALIALALVFAAWEWGRLLKLGGAGPLAYAAVAALALGASTRLGIGAAAARP LFAAAGVFWLLAGPYALWRKPALAERAWKPFLLVAGLVVFSACWHALVAARAQGVPFVLSLLVVVWLADIGAYFAGKAFG KHKLAPSVSPGKTWEGAAGGWLAVMIVAGAAVAAHAFEPTLYSTFVARYGAAGAFAALTVLVAFSVVGDLFESMLKRQAG VKDSSGLLPGHGGVLDRVDALLPVLPLAMLLLG
Sequences:
>Translated_273_residues MLKTRVITAVVLLAVLLPVTLFAPLAAFGALIALALVFAAWEWGRLLKLGGAGPLAYAAVAALALGASTRLGIGAAAARP LFAAAGVFWLLAGPYALWRKPALAERAWKPFLLVAGLVVFSACWHALVAARAQGVPFVLSLLVVVWLADIGAYFAGKAFG KHKLAPSVSPGKTWEGAAGGWLAVMIVAGAAVAAHAFEPTLYSTFVARYGAAGAFAALTVLVAFSVVGDLFESMLKRQAG VKDSSGLLPGHGGVLDRVDALLPVLPLAMLLLG >Mature_273_residues MLKTRVITAVVLLAVLLPVTLFAPLAAFGALIALALVFAAWEWGRLLKLGGAGPLAYAAVAALALGASTRLGIGAAAARP LFAAAGVFWLLAGPYALWRKPALAERAWKPFLLVAGLVVFSACWHALVAARAQGVPFVLSLLVVVWLADIGAYFAGKAFG KHKLAPSVSPGKTWEGAAGGWLAVMIVAGAAVAAHAFEPTLYSTFVARYGAAGAFAALTVLVAFSVVGDLFESMLKRQAG VKDSSGLLPGHGGVLDRVDALLPVLPLAMLLLG
Specific function: Phospholipid biosynthesis. [C]
COG id: COG0575
COG function: function code I; CDP-diglyceride synthetase
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CDS family [H]
Homologues:
Organism=Escherichia coli, GI87081696, Length=296, Percent_Identity=34.1216216216216, Blast_Score=124, Evalue=7e-30, Organism=Escherichia coli, GI1787677, Length=119, Percent_Identity=40.3361344537815, Blast_Score=81, Evalue=6e-17,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000374 [H]
Pfam domain/function: PF01148 CTP_transf_1 [H]
EC number: =2.7.7.41 [H]
Molecular weight: Translated: 28032; Mature: 28032
Theoretical pI: Translated: 10.63; Mature: 10.63
Prosite motif: PS01315 CDS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLKTRVITAVVLLAVLLPVTLFAPLAAFGALIALALVFAAWEWGRLLKLGGAGPLAYAAV CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH AALALGASTRLGIGAAAARPLFAAAGVFWLLAGPYALWRKPALAERAWKPFLLVAGLVVF HHHHHCCCHHCCCCHHHHHHHHHHHHHHHHHHCHHHHHCCCHHHHHHCCHHHHHHHHHHH SACWHALVAARAQGVPFVLSLLVVVWLADIGAYFAGKAFGKHKLAPSVSPGKTWEGAAGG HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCH WLAVMIVAGAAVAAHAFEPTLYSTFVARYGAAGAFAALTVLVAFSVVGDLFESMLKRQAG HHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC VKDSSGLLPGHGGVLDRVDALLPVLPLAMLLLG CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHC >Mature Secondary Structure MLKTRVITAVVLLAVLLPVTLFAPLAAFGALIALALVFAAWEWGRLLKLGGAGPLAYAAV CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH AALALGASTRLGIGAAAARPLFAAAGVFWLLAGPYALWRKPALAERAWKPFLLVAGLVVF HHHHHCCCHHCCCCHHHHHHHHHHHHHHHHHHCHHHHHCCCHHHHHHCCHHHHHHHHHHH SACWHALVAARAQGVPFVLSLLVVVWLADIGAYFAGKAFGKHKLAPSVSPGKTWEGAAGG HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCH WLAVMIVAGAAVAAHAFEPTLYSTFVARYGAAGAFAALTVLVAFSVVGDLFESMLKRQAG HHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC VKDSSGLLPGHGGVLDRVDALLPVLPLAMLLLG CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8654980; 10984043 [H]