| Definition | Burkholderia pseudomallei MSHR346 chromosome I, complete genome. |
|---|---|
| Accession | NC_012695 |
| Length | 4,098,576 |
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The map label for this gene is 237812776
Identifier: 237812776
GI number: 237812776
Start: 2464026
End: 2464790
Strand: Reverse
Name: 237812776
Synonym: GBP346_A2530
Alternate gene names: NA
Gene position: 2464790-2464026 (Counterclockwise)
Preceding gene: 237812780
Following gene: 237812775
Centisome position: 60.14
GC content: 69.41
Gene sequence:
>765_bases ATGGCGACACACCCGACCGGTACGCGCGACGAATGGCTCGCCGCGCGGCTCGAACTGCTCGATGCGGAAAAGGCGCACAC CCGGCGCGGCGACGCGCTCGCGCGGCAGCGCGCGGCGTTGCCGTGGGTGCGCGTCGACAAGGCGTACCGATTCGATACCG ACGAAGGCGGCGCGTCGCTCGCGGACCTGTTCCGCGGCCGCTCGCAACTGCTCGTCTACCACTTCATGTTCGGACCCGAC TACGCGGCGGGATGCCCGTCGTGCTCGGCGCTCGCGGACGGCTTCGACGGCTTCGTCGTCCATCTCGCGCATCACGACGT CACGCTCGCGGCGGTGTCGCGCGCGCCGCTCGTGAAGCTGCGGGCGTATCGCACGCGCATGGGATGGAGGTTCGCGTGGG CGTCGTCGCTCGACGGCGATTTCAACTACGACTTCAACGTGTCGTTTACCGAAGCGCAGCAGCGTGACGGCAGCGTCGAA TACAACTACCGGCGCGGCGGCCGCGCGATGGATGTGACGCCCGCGCCTGTGCCCGTCGCCGGGTTCGCGGCCGATTGCGG GACCGATGCGCGCACGTACGCGCGCGATCGGCCGGGAATGAGCGCGTTCGTGCTCGAGGACGGCGCCGTCTATCACACGT ATTCGACGTACGCGCGCGGGCTGGACGGCCTCTGGGGCATGTACCAGTGGCTCGATCGCGCGCCGAAAGGGCGCAACGAA ACGGGCGTCTGGTGGCGTCGCCATGACGAGTACGACGGGCGCTGA
Upstream 100 bases:
>100_bases AGCCCGCGACTAATCTACCACCACGCGATCACACTCCCCGCGCGCCGGATCGCGGAACGATCGAGCGGCGCGCGACGCAG GCTAAAAGGAGGGACGACCG
Downstream 100 bases:
>100_bases AGGCGTGAGCCGGCATGGCCGGCGCGTTGCCGGGCGCGGCGTGCGGTGTCGCGCGGCGGGAGCGCGCGGCGACGCGTGGC ATGGCCGGCGCCCGGCGCGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 254; Mature: 253
Protein sequence:
>254_residues MATHPTGTRDEWLAARLELLDAEKAHTRRGDALARQRAALPWVRVDKAYRFDTDEGGASLADLFRGRSQLLVYHFMFGPD YAAGCPSCSALADGFDGFVVHLAHHDVTLAAVSRAPLVKLRAYRTRMGWRFAWASSLDGDFNYDFNVSFTEAQQRDGSVE YNYRRGGRAMDVTPAPVPVAGFAADCGTDARTYARDRPGMSAFVLEDGAVYHTYSTYARGLDGLWGMYQWLDRAPKGRNE TGVWWRRHDEYDGR
Sequences:
>Translated_254_residues MATHPTGTRDEWLAARLELLDAEKAHTRRGDALARQRAALPWVRVDKAYRFDTDEGGASLADLFRGRSQLLVYHFMFGPD YAAGCPSCSALADGFDGFVVHLAHHDVTLAAVSRAPLVKLRAYRTRMGWRFAWASSLDGDFNYDFNVSFTEAQQRDGSVE YNYRRGGRAMDVTPAPVPVAGFAADCGTDARTYARDRPGMSAFVLEDGAVYHTYSTYARGLDGLWGMYQWLDRAPKGRNE TGVWWRRHDEYDGR >Mature_253_residues ATHPTGTRDEWLAARLELLDAEKAHTRRGDALARQRAALPWVRVDKAYRFDTDEGGASLADLFRGRSQLLVYHFMFGPDY AAGCPSCSALADGFDGFVVHLAHHDVTLAAVSRAPLVKLRAYRTRMGWRFAWASSLDGDFNYDFNVSFTEAQQRDGSVEY NYRRGGRAMDVTPAPVPVAGFAADCGTDARTYARDRPGMSAFVLEDGAVYHTYSTYARGLDGLWGMYQWLDRAPKGRNET GVWWRRHDEYDGR
Specific function: Unknown
COG id: COG4312
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28547; Mature: 28416
Theoretical pI: Translated: 7.25; Mature: 7.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATHPTGTRDEWLAARLELLDAEKAHTRRGDALARQRAALPWVRVDKAYRFDTDEGGASL CCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCEEEECCEEECCCCCCCHHH ADLFRGRSQLLVYHFMFGPDYAAGCPSCSALADGFDGFVVHLAHHDVTLAAVSRAPLVKL HHHHCCCCCEEEEEEEECCCCCCCCCCHHHHHCCCCCEEEEEECCCEEEEECCCCCHHHH RAYRTRMGWRFAWASSLDGDFNYDFNVSFTEAQQRDGSVEYNYRRGGRAMDVTPAPVPVA HHHHHHCCEEEEECCCCCCCCCCEEEEEECHHHCCCCCEEEEECCCCEEEECCCCCCCCC GFAADCGTDARTYARDRPGMSAFVLEDGAVYHTYSTYARGLDGLWGMYQWLDRAPKGRNE CCHHCCCCCHHHHHCCCCCCEEEEEECCEEEEEHHHHHHCHHHHHHHHHHHHHCCCCCCC TGVWWRRHDEYDGR CCCEEEECCCCCCC >Mature Secondary Structure ATHPTGTRDEWLAARLELLDAEKAHTRRGDALARQRAALPWVRVDKAYRFDTDEGGASL CCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCEEEECCEEECCCCCCCHHH ADLFRGRSQLLVYHFMFGPDYAAGCPSCSALADGFDGFVVHLAHHDVTLAAVSRAPLVKL HHHHCCCCCEEEEEEEECCCCCCCCCCHHHHHCCCCCEEEEEECCCEEEEECCCCCHHHH RAYRTRMGWRFAWASSLDGDFNYDFNVSFTEAQQRDGSVEYNYRRGGRAMDVTPAPVPVA HHHHHHCCEEEEECCCCCCCCCCEEEEEECHHHCCCCCEEEEECCCCEEEECCCCCCCCC GFAADCGTDARTYARDRPGMSAFVLEDGAVYHTYSTYARGLDGLWGMYQWLDRAPKGRNE CCHHCCCCCHHHHHCCCCCCEEEEEECCEEEEEHHHHHHCHHHHHHHHHHHHHCCCCCCC TGVWWRRHDEYDGR CCCEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA