| Definition | Burkholderia pseudomallei MSHR346 chromosome I, complete genome. |
|---|---|
| Accession | NC_012695 |
| Length | 4,098,576 |
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The map label for this gene is 237812775
Identifier: 237812775
GI number: 237812775
Start: 2463661
End: 2464011
Strand: Reverse
Name: 237812775
Synonym: GBP346_A2529
Alternate gene names: NA
Gene position: 2464011-2463661 (Counterclockwise)
Preceding gene: 237812776
Following gene: 237812774
Centisome position: 60.12
GC content: 72.65
Gene sequence:
>351_bases ATGGCCGGCGCGTTGCCGGGCGCGGCGTGCGGTGTCGCGCGGCGGGAGCGCGCGGCGACGCGTGGCATGGCCGGCGCCCG GCGCGGGCGCGACGTTCGCGTCGAGGCCGGCCGGCATGCGCCCGCCGTATTTCGCCGTGCGGTATGCCGCGGCATGAGCG CGGCATGGGCCGCATCATACGTCTCGTGCATTCCGCGCGCCGGGCACGTTCGACGCATCCGGCGCACCCATCCCGCCCAT CCGGCGCGAACCCGCGCGACGCCGGCGGAAACGAAACCGGATCGAAAACGACTCGAACCGGGATCCGAACGATTCGGGGC CCAAACGGCTAAGCCGTTGTTCGTGTTGTGA
Upstream 100 bases:
>100_bases TGTACCAGTGGCTCGATCGCGCGCCGAAAGGGCGCAACGAAACGGGCGTCTGGTGGCGTCGCCATGACGAGTACGACGGG CGCTGAAGGCGTGAGCCGGC
Downstream 100 bases:
>100_bases AAATTAACCGGGCATCGCGTATAATTCGGTTTTGCGCCTATAGGATTTGCCATGCGTCTGATCCAAAAAGCACTCACGTT CGATGACGTGCTCCTCGTCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 116; Mature: 115
Protein sequence:
>116_residues MAGALPGAACGVARRERAATRGMAGARRGRDVRVEAGRHAPAVFRRAVCRGMSAAWAASYVSCIPRAGHVRRIRRTHPAH PARTRATPAETKPDRKRLEPGSERFGAQTAKPLFVL
Sequences:
>Translated_116_residues MAGALPGAACGVARRERAATRGMAGARRGRDVRVEAGRHAPAVFRRAVCRGMSAAWAASYVSCIPRAGHVRRIRRTHPAH PARTRATPAETKPDRKRLEPGSERFGAQTAKPLFVL >Mature_115_residues AGALPGAACGVARRERAATRGMAGARRGRDVRVEAGRHAPAVFRRAVCRGMSAAWAASYVSCIPRAGHVRRIRRTHPAHP ARTRATPAETKPDRKRLEPGSERFGAQTAKPLFVL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12520; Mature: 12388
Theoretical pI: Translated: 12.43; Mature: 12.43
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAGALPGAACGVARRERAATRGMAGARRGRDVRVEAGRHAPAVFRRAVCRGMSAAWAASY CCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHCCHHHHHHHH VSCIPRAGHVRRIRRTHPAHPARTRATPAETKPDRKRLEPGSERFGAQTAKPLFVL HHHCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHCCCCHHHHCCCCCCCEECC >Mature Secondary Structure AGALPGAACGVARRERAATRGMAGARRGRDVRVEAGRHAPAVFRRAVCRGMSAAWAASY CCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHCCHHHHHHHH VSCIPRAGHVRRIRRTHPAHPARTRATPAETKPDRKRLEPGSERFGAQTAKPLFVL HHHCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHCCCCHHHHCCCCCCCEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA