| Definition | Burkholderia pseudomallei MSHR346 chromosome I, complete genome. |
|---|---|
| Accession | NC_012695 |
| Length | 4,098,576 |
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The map label for this gene is atzB [H]
Identifier: 237812738
GI number: 237812738
Start: 2432258
End: 2433760
Strand: Reverse
Name: atzB [H]
Synonym: GBP346_A2491
Alternate gene names: 237812738
Gene position: 2433760-2432258 (Counterclockwise)
Preceding gene: 237812739
Following gene: 237812736
Centisome position: 59.38
GC content: 70.26
Gene sequence:
>1503_bases TTGTTCGAGCGTTCGAACATTCGAGCACAAGCGGCCGCTTCGGCGGCGCAACGACACGGAGATCGAACGACGATGGAACG ACACCCGAGCGCGCGAGCCGGCGCGCACTCCCTATCCCAGCCCCCCTCCCTTTCCCCGAACCGATCGAAGACGCTCGTCG TCAAGCACGCCGACGTGCTCGTGACGATGGACGGCGCGCGCCGCGAACTGCGCGATGCGGGCCTGTATGTCGAGGACAAC CGGATCGTCGCGGTCGGCCCGAGCGCCGAGTTGCCCGAGCAGGCGGACGAAGTGCTCGATCTGCGCGGGCATCTCGTGAT CCCGGGGCTCGTCAACACGCATCATCATATGTATCAGAGCCTCACGCGCGCGATTCCCGCCGCGCAGAACGCCGAGCTGT TCGGCTGGCTCACGAATCTATACCAGATCTGGGCGCATCTGACGCCGGAGATGATCGAGGTATCGGCGCTGACCGCGATG GCCGAGCTGCTGCTGTCCGGCTGCACGACGTCGAGCGATCATCTGTACATCTATCCGAACGGCAGCCGGCTCGACGATAG CATCGCGGCCGCGCGGCGCATCGGCATGCGCTTTCACGCGAGCCGCGGCAGCATGAGCGTCGGGCAGCGCGACGGCGGGT TGCCGCCCGATGCGGTCGTCGAGCGCGAGGCGGACATCCTGCGCGATACGCAGCGCGTGATCGAGACCTACCATGACGAA GGCCGCTATGCGATGCTGCGTGTCGCCGTCGCGCCGTGTTCGCCGTTCTCGGTGAGCCGCGGCCTGATGCGCGACGCGGC GGCGCTCGCGCGCGAGCACCGCGTGTCGCTGCACACGCACCTCGCGGAGAACGTGAACGACGTCGCGTACAGCCGCGAGA AGTTCGGGATGACGCCGGCCGAGTATGCGGAGGATCTCGGCTGGGTGGGGCGCGACGTGTGGCACGCGCATTGCGTGCGG CTCGACGAGCCCGGCATCGCGCTTTTTGCGCGCACCGGCACGGGCGTCGCGCATTGCCCTTGCTCGAACATGCGGCTGGC GTCCGGGATCGCCCCCATCGCGCGAATGCGGCGCGCGGGCGTGCCGGTCGGGCTCGGCGTCGACGGTTGCGCGTCGAACG ACGGCGCGCAGATGGTGGCCGAGGCGCGGCAGGCGCTGCTGCTGCAGCGCGTCGGATTCGGGCCGGACGCGCTGAGCGCG CGCGACGCGCTCGAGATCGCGACGCTCGGCGGCGCGCGCGTGCTGAACCGCGACGACATCGGCGCGCTCGCGCCGGGCAT GGCCGCGGATTTCGTCGCGTTCGACCTGCGCACGCCGCAGTTCGCGGGCGCGCTGCACGATCCCGTCGCGGCGCTCGTGT TCTGCGCACCGCCGCAGGCGGCGTACAGCGTCGTCAACGGGCGCGTCGTCGTGCGGGAAGGGCGGCTGACGACGCTCGAG ATCGAGCCGCTCGTCGAGCGGCACAACGCGCTGGCTCGCGCGCTTTGCGACGCGGCGCGCTGA
Upstream 100 bases:
>100_bases CGGCGTCGCGCGGTCGCGCACCCCGAAGACGGCGGGCACGCCGGGTAACCGGGCCAGGGCGTTCGAACGGACGCGGCGGC GCGGTGATGCGCCGCGCGCC
Downstream 100 bases:
>100_bases GCGGCGCCGGGAGCGGGCGGCTCGGCGCGGGCCAGCCCGCGCGTTGCGCGCGCATGCGTGCGCGCTCGTGCGGATGCGGC CGCGGAGCGGCCGATGCTTG
Product: hydroxydechloroatrazine ethylaminohydrolase
Products: NA
Alternate protein names: Hydroxyatrazine hydrolase [H]
Number of amino acids: Translated: 500; Mature: 500
Protein sequence:
>500_residues MFERSNIRAQAAASAAQRHGDRTTMERHPSARAGAHSLSQPPSLSPNRSKTLVVKHADVLVTMDGARRELRDAGLYVEDN RIVAVGPSAELPEQADEVLDLRGHLVIPGLVNTHHHMYQSLTRAIPAAQNAELFGWLTNLYQIWAHLTPEMIEVSALTAM AELLLSGCTTSSDHLYIYPNGSRLDDSIAAARRIGMRFHASRGSMSVGQRDGGLPPDAVVEREADILRDTQRVIETYHDE GRYAMLRVAVAPCSPFSVSRGLMRDAAALAREHRVSLHTHLAENVNDVAYSREKFGMTPAEYAEDLGWVGRDVWHAHCVR LDEPGIALFARTGTGVAHCPCSNMRLASGIAPIARMRRAGVPVGLGVDGCASNDGAQMVAEARQALLLQRVGFGPDALSA RDALEIATLGGARVLNRDDIGALAPGMAADFVAFDLRTPQFAGALHDPVAALVFCAPPQAAYSVVNGRVVVREGRLTTLE IEPLVERHNALARALCDAAR
Sequences:
>Translated_500_residues MFERSNIRAQAAASAAQRHGDRTTMERHPSARAGAHSLSQPPSLSPNRSKTLVVKHADVLVTMDGARRELRDAGLYVEDN RIVAVGPSAELPEQADEVLDLRGHLVIPGLVNTHHHMYQSLTRAIPAAQNAELFGWLTNLYQIWAHLTPEMIEVSALTAM AELLLSGCTTSSDHLYIYPNGSRLDDSIAAARRIGMRFHASRGSMSVGQRDGGLPPDAVVEREADILRDTQRVIETYHDE GRYAMLRVAVAPCSPFSVSRGLMRDAAALAREHRVSLHTHLAENVNDVAYSREKFGMTPAEYAEDLGWVGRDVWHAHCVR LDEPGIALFARTGTGVAHCPCSNMRLASGIAPIARMRRAGVPVGLGVDGCASNDGAQMVAEARQALLLQRVGFGPDALSA RDALEIATLGGARVLNRDDIGALAPGMAADFVAFDLRTPQFAGALHDPVAALVFCAPPQAAYSVVNGRVVVREGRLTTLE IEPLVERHNALARALCDAAR >Mature_500_residues MFERSNIRAQAAASAAQRHGDRTTMERHPSARAGAHSLSQPPSLSPNRSKTLVVKHADVLVTMDGARRELRDAGLYVEDN RIVAVGPSAELPEQADEVLDLRGHLVIPGLVNTHHHMYQSLTRAIPAAQNAELFGWLTNLYQIWAHLTPEMIEVSALTAM AELLLSGCTTSSDHLYIYPNGSRLDDSIAAARRIGMRFHASRGSMSVGQRDGGLPPDAVVEREADILRDTQRVIETYHDE GRYAMLRVAVAPCSPFSVSRGLMRDAAALAREHRVSLHTHLAENVNDVAYSREKFGMTPAEYAEDLGWVGRDVWHAHCVR LDEPGIALFARTGTGVAHCPCSNMRLASGIAPIARMRRAGVPVGLGVDGCASNDGAQMVAEARQALLLQRVGFGPDALSA RDALEIATLGGARVLNRDDIGALAPGMAADFVAFDLRTPQFAGALHDPVAALVFCAPPQAAYSVVNGRVVVREGRLTTLE IEPLVERHNALARALCDAAR
Specific function: Catalyzes the deamination reaction of hydroxyatrazine to N-isopropylammelide (dihydroxy-isopropyl-atrazine). The enzyme is also capable of catalyzing some dechlorinating reactions [H]
COG id: COG0402
COG function: function code FR; Cytosine deaminase and related metal-dependent hydrolases
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ATZ/TRZ family [H]
Homologues:
Organism=Homo sapiens, GI4758426, Length=381, Percent_Identity=23.8845144356955, Blast_Score=79, Evalue=1e-14, Organism=Escherichia coli, GI1789249, Length=445, Percent_Identity=28.314606741573, Blast_Score=127, Evalue=2e-30, Organism=Escherichia coli, GI87082177, Length=425, Percent_Identity=24.4705882352941, Blast_Score=82, Evalue=9e-17, Organism=Caenorhabditis elegans, GI17540282, Length=433, Percent_Identity=24.2494226327945, Blast_Score=97, Evalue=1e-20, Organism=Saccharomyces cerevisiae, GI6319963, Length=344, Percent_Identity=24.7093023255814, Blast_Score=92, Evalue=2e-19, Organism=Drosophila melanogaster, GI24643849, Length=355, Percent_Identity=24.5070422535211, Blast_Score=82, Evalue=8e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006680 - InterPro: IPR011059 [H]
Pfam domain/function: PF01979 Amidohydro_1 [H]
EC number: =3.5.99.3 [H]
Molecular weight: Translated: 53981; Mature: 53981
Theoretical pI: Translated: 6.86; Mature: 6.86
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFERSNIRAQAAASAAQRHGDRTTMERHPSARAGAHSLSQPPSLSPNRSKTLVVKHADVL CCCCCCCHHHHHHHHHHHCCCCCHHHHCCCHHCCCCCCCCCCCCCCCCCCEEEEEECEEE VTMDGARRELRDAGLYVEDNRIVAVGPSAELPEQADEVLDLRGHLVIPGLVNTHHHMYQS EEECCHHHHHHHCCCEEECCEEEEECCCCCCCHHHHHHHHCCCCEEECCHHHHHHHHHHH LTRAIPAAQNAELFGWLTNLYQIWAHLTPEMIEVSALTAMAELLLSGCTTSSDHLYIYPN HHHHCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEC GSRLDDSIAAARRIGMRFHASRGSMSVGQRDGGLPPDAVVEREADILRDTQRVIETYHDE CCCCHHHHHHHHHHHHEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCC GRYAMLRVAVAPCSPFSVSRGLMRDAAALAREHRVSLHTHLAENVNDVAYSREKFGMTPA CCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH EYAEDLGWVGRDVWHAHCVRLDEPGIALFARTGTGVAHCPCSNMRLASGIAPIARMRRAG HHHHHHHHHHHHHHHHHHEEECCCCEEEEEECCCCEEECCCCCCCHHHHHHHHHHHHHCC VPVGLGVDGCASNDGAQMVAEARQALLLQRVGFGPDALSARDALEIATLGGARVLNRDDI CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHEEECCCCEEECCCCC GALAPGMAADFVAFDLRTPQFAGALHDPVAALVFCAPPQAAYSVVNGRVVVREGRLTTLE CCCCCCCHHHHEEEECCCCHHHCHHHCCHHEEEEECCCHHHHHHHCCEEEEECCCEEEEE IEPLVERHNALARALCDAAR HHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MFERSNIRAQAAASAAQRHGDRTTMERHPSARAGAHSLSQPPSLSPNRSKTLVVKHADVL CCCCCCCHHHHHHHHHHHCCCCCHHHHCCCHHCCCCCCCCCCCCCCCCCCEEEEEECEEE VTMDGARRELRDAGLYVEDNRIVAVGPSAELPEQADEVLDLRGHLVIPGLVNTHHHMYQS EEECCHHHHHHHCCCEEECCEEEEECCCCCCCHHHHHHHHCCCCEEECCHHHHHHHHHHH LTRAIPAAQNAELFGWLTNLYQIWAHLTPEMIEVSALTAMAELLLSGCTTSSDHLYIYPN HHHHCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEC GSRLDDSIAAARRIGMRFHASRGSMSVGQRDGGLPPDAVVEREADILRDTQRVIETYHDE CCCCHHHHHHHHHHHHEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCC GRYAMLRVAVAPCSPFSVSRGLMRDAAALAREHRVSLHTHLAENVNDVAYSREKFGMTPA CCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH EYAEDLGWVGRDVWHAHCVRLDEPGIALFARTGTGVAHCPCSNMRLASGIAPIARMRRAG HHHHHHHHHHHHHHHHHHEEECCCCEEEEEECCCCEEECCCCCCCHHHHHHHHHHHHHCC VPVGLGVDGCASNDGAQMVAEARQALLLQRVGFGPDALSARDALEIATLGGARVLNRDDI CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHEEECCCCEEECCCCC GALAPGMAADFVAFDLRTPQFAGALHDPVAALVFCAPPQAAYSVVNGRVVVREGRLTTLE CCCCCCCHHHHEEEECCCCHHHCHHHCCHHEEEEECCCHHHHHHHCCEEEEECCCEEEEE IEPLVERHNALARALCDAAR HHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9055410 [H]