| Definition | Burkholderia pseudomallei MSHR346 chromosome I, complete genome. |
|---|---|
| Accession | NC_012695 |
| Length | 4,098,576 |
Click here to switch to the map view.
The map label for this gene is 237812670
Identifier: 237812670
GI number: 237812670
Start: 2375373
End: 2375549
Strand: Reverse
Name: 237812670
Synonym: GBP346_A2420
Alternate gene names: NA
Gene position: 2375549-2375373 (Counterclockwise)
Preceding gene: 237812671
Following gene: 237812668
Centisome position: 57.96
GC content: 67.8
Gene sequence:
>177_bases GTGAGCTCGGCGTGGGGAGTGGCGGGCCCGCGGCGCGGCCTTTACGGCGAACAGCAGCGTTGCGTCGTGTCGCGTGCGTT CCTCGGTCGAAGCGACGGACCCATGGTATCGGCCGGCCCGGCACCGCCGGCGGATCGACATATCAAGCGTTGCAGTACCG AAGCACCGAAGTACTGA
Upstream 100 bases:
>100_bases CGGCGAGCGTGCGAGCCGGGTTTCGCGCCTAAACGGGCGGCTCCCGGCGGCGGCCGCTGGAAGCCGGCCCGGCCGGTCGG CCCGGCTGCGCGGGACGACG
Downstream 100 bases:
>100_bases AGTACCGAGATGCCGGCACGGCGCGATCAGTGCGATGACGTCCGCAGCAGCGGCTTGAGGGCCGGCCATACGTTGTCGAG CAACTGGCGCTGCGCGGCCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 58; Mature: 57
Protein sequence:
>58_residues MSSAWGVAGPRRGLYGEQQRCVVSRAFLGRSDGPMVSAGPAPPADRHIKRCSTEAPKY
Sequences:
>Translated_58_residues MSSAWGVAGPRRGLYGEQQRCVVSRAFLGRSDGPMVSAGPAPPADRHIKRCSTEAPKY >Mature_57_residues SSAWGVAGPRRGLYGEQQRCVVSRAFLGRSDGPMVSAGPAPPADRHIKRCSTEAPKY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 6217; Mature: 6086
Theoretical pI: Translated: 10.44; Mature: 10.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.4 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 6.9 %Cys+Met (Translated Protein) 3.5 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSAWGVAGPRRGLYGEQQRCVVSRAFLGRSDGPMVSAGPAPPADRHIKRCSTEAPKY CCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCEEECCCCCCHHHHHHHHCCCCCCC >Mature Secondary Structure SSAWGVAGPRRGLYGEQQRCVVSRAFLGRSDGPMVSAGPAPPADRHIKRCSTEAPKY CCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCEEECCCCCCHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA