| Definition | Burkholderia pseudomallei MSHR346 chromosome I, complete genome. |
|---|---|
| Accession | NC_012695 |
| Length | 4,098,576 |
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The map label for this gene is yhbS [H]
Identifier: 237812661
GI number: 237812661
Start: 2364128
End: 2364661
Strand: Reverse
Name: yhbS [H]
Synonym: GBP346_A2411
Alternate gene names: 237812661
Gene position: 2364661-2364128 (Counterclockwise)
Preceding gene: 237812662
Following gene: 237812655
Centisome position: 57.69
GC content: 76.97
Gene sequence:
>534_bases ATGACCGCCGCGGCGACCGCGCCGGGCGGTGCCGTCACGCTGCGCGGCGAACGCGCGGGCGACGCCGCGGCGCTCGCGCG CGTGATCGTCGCCGCATTCGCGGATGAGCCGCAAGGCGGGCAATTCGAGCGGCGCATCGTCGACGCGCTGCGCGCGGACG GCCGCCTCAGCGTGTCGCTCGTCGCGGTGCGCGATGGGCGCCTCGTCGGCCATGTCGCGTTTTCGCCGGTGGCGATCGGC GCGGGCGGCGAAGGATGGCACGGGCTCGCGCCGCTCGCGGTGTGGCCCGGCTGCCAGCGGCAGGGCATCGGCGCGGCGCT CGTGCGCGCGGGGCTCGATGCCTTGCGGCGCGCCGGCGCGCGCGGTTGCGTCGTGCTCGGCGAGCCCGCCTGTTACGCGC GCTTCGGCTTCGGGCCGGCCGGCGACATCGTGTTTCCGCAGGCTCCGCCCGACGCTCTGATGGCGCTGCCGTTCGGCGAG CACGCGCCGCGCCCGGCGGGCGCGCTCCGCTATCACGCGTCGTTCTACGCGTAA
Upstream 100 bases:
>100_bases CATCGCACGGTGACGATGAGCTGGCATCCGCAGGGCTGGGGCGAAGCGAGCCCGTGGCTGCGCGTGTTCCGCAACGCGCG CCGCTGGATCGGCTGACGCG
Downstream 100 bases:
>100_bases TCGCCGCGAGCGTTCGCCGCCGCGCCGGCCGGTTCGGCTCGGACAAAAAGAAAGCCGCTCGTCGGAGCGGCTTGCTCGTT CGCGGCGCGAAGCGGCGTTA
Product: acetyltransferase, gnat family
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 177; Mature: 176
Protein sequence:
>177_residues MTAAATAPGGAVTLRGERAGDAAALARVIVAAFADEPQGGQFERRIVDALRADGRLSVSLVAVRDGRLVGHVAFSPVAIG AGGEGWHGLAPLAVWPGCQRQGIGAALVRAGLDALRRAGARGCVVLGEPACYARFGFGPAGDIVFPQAPPDALMALPFGE HAPRPAGALRYHASFYA
Sequences:
>Translated_177_residues MTAAATAPGGAVTLRGERAGDAAALARVIVAAFADEPQGGQFERRIVDALRADGRLSVSLVAVRDGRLVGHVAFSPVAIG AGGEGWHGLAPLAVWPGCQRQGIGAALVRAGLDALRRAGARGCVVLGEPACYARFGFGPAGDIVFPQAPPDALMALPFGE HAPRPAGALRYHASFYA >Mature_176_residues TAAATAPGGAVTLRGERAGDAAALARVIVAAFADEPQGGQFERRIVDALRADGRLSVSLVAVRDGRLVGHVAFSPVAIGA GGEGWHGLAPLAVWPGCQRQGIGAALVRAGLDALRRAGARGCVVLGEPACYARFGFGPAGDIVFPQAPPDALMALPFGEH APRPAGALRYHASFYA
Specific function: Unknown
COG id: COG3153
COG function: function code R; Predicted acetyltransferase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 N-acetyltransferase domain [H]
Homologues:
Organism=Escherichia coli, GI1789546, Length=96, Percent_Identity=46.875, Blast_Score=82, Evalue=2e-17, Organism=Escherichia coli, GI1790761, Length=143, Percent_Identity=34.965034965035, Blast_Score=65, Evalue=3e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000182 - InterPro: IPR016181 [H]
Pfam domain/function: PF00583 Acetyltransf_1 [H]
EC number: 2.3.1.- [C]
Molecular weight: Translated: 18018; Mature: 17887
Theoretical pI: Translated: 8.91; Mature: 8.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTAAATAPGGAVTLRGERAGDAAALARVIVAAFADEPQGGQFERRIVDALRADGRLSVSL CCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCEEEEE VAVRDGRLVGHVAFSPVAIGAGGEGWHGLAPLAVWPGCQRQGIGAALVRAGLDALRRAGA EEEECCEEEEEEEECCEEECCCCCCCCCCCCCEECCCCCCCCCHHHHHHHHHHHHHHCCC RGCVVLGEPACYARFGFGPAGDIVFPQAPPDALMALPFGEHAPRPAGALRYHASFYA CCEEEECCCCEEEECCCCCCCCEECCCCCCCCEEECCCCCCCCCCCCCEEEEEEECC >Mature Secondary Structure TAAATAPGGAVTLRGERAGDAAALARVIVAAFADEPQGGQFERRIVDALRADGRLSVSL CCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCEEEEE VAVRDGRLVGHVAFSPVAIGAGGEGWHGLAPLAVWPGCQRQGIGAALVRAGLDALRRAGA EEEECCEEEEEEEECCEEECCCCCCCCCCCCCEECCCCCCCCCHHHHHHHHHHHHHHCCC RGCVVLGEPACYARFGFGPAGDIVFPQAPPDALMALPFGEHAPRPAGALRYHASFYA CCEEEECCCCEEEECCCCCCCCEECCCCCCCCEEECCCCCCCCCCCCCEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]