| Definition | Burkholderia pseudomallei MSHR346 chromosome I, complete genome. |
|---|---|
| Accession | NC_012695 |
| Length | 4,098,576 |
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The map label for this gene is 237812643
Identifier: 237812643
GI number: 237812643
Start: 2347988
End: 2348839
Strand: Direct
Name: 237812643
Synonym: GBP346_A2393
Alternate gene names: NA
Gene position: 2347988-2348839 (Clockwise)
Preceding gene: 237812642
Following gene: 237812650
Centisome position: 57.29
GC content: 73.47
Gene sequence:
>852_bases ATGTGCCTGATCGTATTCGATTGGCAGCCCGACACCACGCACGGCCCGGTGCTGACGCTCGCCGCGAACCGCGACGAATT CTTCCGCCGCACGAGCGCGCCGCTCGCGTGGTGGAGCGACGCGCCGCACGTGCTCGCGGGCCGCGATCTCGAAGGCGGCG GCACGTGGCTCGGCGTCGCGCGCGACGGCCGCTTCGCCGCGCTCACCAATTACCGCGCGCCGTTCGACATACGCGCGGGC GCGCCGACGCGCGGCAAGCTCGTCTCCGGCTTCCTGACGGGCGAGAACGTCGCGCCGCTCGACTATCTCGCGAACGTCGC CGAGAAGGCCGTGTTCTACAACGGCTTCACGCTGCTCGCGGGCGACGTCGCGCGCGGCGAACTCGCGTGGTACTGCAATC GCCCGGCCGACGCCCAGCCGGCGCCCGACGCGCCCGTATCCGTCGCGCCCGGCGTGCACGGGCTGTCGAACGCCCGGCTC GACACGCCGTGGCCGAAGCTCGTCGGCAAGCGCAGCGCGCTCGGCGCGCTGCTCACCGGCGACGCGGCGGCGCCGCTCGA CGCGCTGATCGAGATGATGCGCGACACCCGCGAGGCCGCCGACGACGCGCTGCCGCACACGGGCATTCCGCTCGAGCGCG AGCGCGCGCTGTCCGCGGCGTTCATCGAGACGCCCGAATACGGATCGCGCGGCACGACGGTGCTGCGGGTCGCGCGCGAC GCCGAGGGGCGGCTCAGGTTCGACATGAAGGAGCGATGCGACGACGACGGCTCGCACCGGATCGTGCGGCCGGGCGCGTT CGAGCGCGCGTTCACGTTCGACGTCGACACGGGCGGCCACCCGCGTCGGTGA
Upstream 100 bases:
>100_bases CTTCCCTACGCGCTGCCCGTCGAAGCCTGACGGCCGCGCGCCGCCGGAGCGCGCGCGCCGCGGCGCGCCGGCCGGCCTCA CCCAGCGAGGATATCGCCCG
Downstream 100 bases:
>100_bases TCGAGACGGCGGCGCCTCGGCGTGCCCGGCTCCGTTCACGGCTCGCGGGCCATCTCGATATGCTGCACGCCCGCCGCGAC GAACGGCTCGCCGACGATCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 283; Mature: 283
Protein sequence:
>283_residues MCLIVFDWQPDTTHGPVLTLAANRDEFFRRTSAPLAWWSDAPHVLAGRDLEGGGTWLGVARDGRFAALTNYRAPFDIRAG APTRGKLVSGFLTGENVAPLDYLANVAEKAVFYNGFTLLAGDVARGELAWYCNRPADAQPAPDAPVSVAPGVHGLSNARL DTPWPKLVGKRSALGALLTGDAAAPLDALIEMMRDTREAADDALPHTGIPLERERALSAAFIETPEYGSRGTTVLRVARD AEGRLRFDMKERCDDDGSHRIVRPGAFERAFTFDVDTGGHPRR
Sequences:
>Translated_283_residues MCLIVFDWQPDTTHGPVLTLAANRDEFFRRTSAPLAWWSDAPHVLAGRDLEGGGTWLGVARDGRFAALTNYRAPFDIRAG APTRGKLVSGFLTGENVAPLDYLANVAEKAVFYNGFTLLAGDVARGELAWYCNRPADAQPAPDAPVSVAPGVHGLSNARL DTPWPKLVGKRSALGALLTGDAAAPLDALIEMMRDTREAADDALPHTGIPLERERALSAAFIETPEYGSRGTTVLRVARD AEGRLRFDMKERCDDDGSHRIVRPGAFERAFTFDVDTGGHPRR >Mature_283_residues MCLIVFDWQPDTTHGPVLTLAANRDEFFRRTSAPLAWWSDAPHVLAGRDLEGGGTWLGVARDGRFAALTNYRAPFDIRAG APTRGKLVSGFLTGENVAPLDYLANVAEKAVFYNGFTLLAGDVARGELAWYCNRPADAQPAPDAPVSVAPGVHGLSNARL DTPWPKLVGKRSALGALLTGDAAAPLDALIEMMRDTREAADDALPHTGIPLERERALSAAFIETPEYGSRGTTVLRVARD AEGRLRFDMKERCDDDGSHRIVRPGAFERAFTFDVDTGGHPRR
Specific function: Unknown
COG id: COG3332
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI190570176, Length=284, Percent_Identity=36.6197183098592, Blast_Score=147, Evalue=1e-35, Organism=Drosophila melanogaster, GI18859691, Length=266, Percent_Identity=27.4436090225564, Blast_Score=73, Evalue=2e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30694; Mature: 30694
Theoretical pI: Translated: 5.97; Mature: 5.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MCLIVFDWQPDTTHGPVLTLAANRDEFFRRTSAPLAWWSDAPHVLAGRDLEGGGTWLGVA CEEEEEECCCCCCCCCEEEEECCCHHHHHHHCCCEEEECCCCCEEECCCCCCCCCEEEEE RDGRFAALTNYRAPFDIRAGAPTRGKLVSGFLTGENVAPLDYLANVAEKAVFYNGFTLLA CCCCEEEEECCCCCEEEECCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHEEECCEEEEE GDVARGELAWYCNRPADAQPAPDAPVSVAPGVHGLSNARLDTPWPKLVGKRSALGALLTG CCCCCCCEEEEECCCCCCCCCCCCCCEECCCCCCCCCCCCCCCHHHHHCCHHHHCEEEEC DAAAPLDALIEMMRDTREAADDALPHTGIPLERERALSAAFIETPEYGSRGTTVLRVARD CCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHEEECCCCCCCCCEEEEEEEC AEGRLRFDMKERCDDDGSHRIVRPGAFERAFTFDVDTGGHPRR CCCCEEECHHHHCCCCCCCEEECCCCCCEEEEEEECCCCCCCC >Mature Secondary Structure MCLIVFDWQPDTTHGPVLTLAANRDEFFRRTSAPLAWWSDAPHVLAGRDLEGGGTWLGVA CEEEEEECCCCCCCCCEEEEECCCHHHHHHHCCCEEEECCCCCEEECCCCCCCCCEEEEE RDGRFAALTNYRAPFDIRAGAPTRGKLVSGFLTGENVAPLDYLANVAEKAVFYNGFTLLA CCCCEEEEECCCCCEEEECCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHEEECCEEEEE GDVARGELAWYCNRPADAQPAPDAPVSVAPGVHGLSNARLDTPWPKLVGKRSALGALLTG CCCCCCCEEEEECCCCCCCCCCCCCCEECCCCCCCCCCCCCCCHHHHHCCHHHHCEEEEC DAAAPLDALIEMMRDTREAADDALPHTGIPLERERALSAAFIETPEYGSRGTTVLRVARD CCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHEEECCCCCCCCCEEEEEEEC AEGRLRFDMKERCDDDGSHRIVRPGAFERAFTFDVDTGGHPRR CCCCEEECHHHHCCCCCCCEEECCCCCCEEEEEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA