| Definition | Burkholderia pseudomallei MSHR346 chromosome I, complete genome. |
|---|---|
| Accession | NC_012695 |
| Length | 4,098,576 |
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The map label for this gene is psiF [C]
Identifier: 237812628
GI number: 237812628
Start: 2335368
End: 2335658
Strand: Direct
Name: psiF [C]
Synonym: GBP346_A2378
Alternate gene names: 237812628
Gene position: 2335368-2335658 (Clockwise)
Preceding gene: 237812627
Following gene: 237812629
Centisome position: 56.98
GC content: 64.95
Gene sequence:
>291_bases ATGAAGATCCGATCGCTGATGGCCGCGCTGCTCGTCGGCGGCGTGCTGGCAACGCCTGCTTTCGCCGCAAACAGCCAGCA GGACAAGATGAAGGCATGCAACGCGCAGGCCGCCGGCAAGACGGGCGACGAGCGCAAGGCGTTCATGAAGGACTGCCTCG CGGCGAAGCCGGCGAAGAAGATGTCGCAGCAGGAGAAGATGAAGGCCTGCAACACGCAAGCCGCCGGCAAGACGGGCGAC GAGCGCAAGGCATTCATGAAGGACTGCCTGTCGGCGAAGCCCGCCGCCTGA
Upstream 100 bases:
>100_bases CGTTTCAGCGCCGATTTGCCATAATGCAAACCGCGACCCGCGCTGCCGCGCGATTCGCGGCTTATCGAACAACATGTAGT CCACCCACTGGGAGTGTCCA
Downstream 100 bases:
>100_bases CGCTTCCAGCGAATCGGCACGATGCCGCGCACCGTTTCGACGGGCGCGGCATTTTTCTTTTCGGCGCGCGCCGCCGCGCG CGCCGACTGCGGCGTTTGGC
Product: phosphate starvation-inducible protein PsiF
Products: NA
Alternate protein names: Phosphate Starvation-Inducible Protein; PsiF Repeat-Containing Protein; PsiF Repeat Protein; Protein Induced By Phosphate Starvation; Phosphate Starvation Inducible PsiF; Psif Repeat Protein
Number of amino acids: Translated: 96; Mature: 96
Protein sequence:
>96_residues MKIRSLMAALLVGGVLATPAFAANSQQDKMKACNAQAAGKTGDERKAFMKDCLAAKPAKKMSQQEKMKACNTQAAGKTGD ERKAFMKDCLSAKPAA
Sequences:
>Translated_96_residues MKIRSLMAALLVGGVLATPAFAANSQQDKMKACNAQAAGKTGDERKAFMKDCLAAKPAKKMSQQEKMKACNTQAAGKTGD ERKAFMKDCLSAKPAA >Mature_96_residues MKIRSLMAALLVGGVLATPAFAANSQQDKMKACNAQAAGKTGDERKAFMKDCLAAKPAKKMSQQEKMKACNTQAAGKTGD ERKAFMKDCLSAKPAA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI87081731, Length=103, Percent_Identity=41.747572815534, Blast_Score=63, Evalue=4e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10125; Mature: 10125
Theoretical pI: Translated: 10.50; Mature: 10.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.2 %Cys (Translated Protein) 7.3 %Met (Translated Protein) 11.5 %Cys+Met (Translated Protein) 4.2 %Cys (Mature Protein) 7.3 %Met (Mature Protein) 11.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKIRSLMAALLVGGVLATPAFAANSQQDKMKACNAQAAGKTGDERKAFMKDCLAAKPAKK CCHHHHHHHHHHHHHHHCCCHHCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCHHH MSQQEKMKACNTQAAGKTGDERKAFMKDCLSAKPAA HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCC >Mature Secondary Structure MKIRSLMAALLVGGVLATPAFAANSQQDKMKACNAQAAGKTGDERKAFMKDCLAAKPAKK CCHHHHHHHHHHHHHHHCCCHHCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCHHH MSQQEKMKACNTQAAGKTGDERKAFMKDCLSAKPAA HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA