Definition Burkholderia pseudomallei MSHR346 chromosome I, complete genome.
Accession NC_012695
Length 4,098,576

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The map label for this gene is 237812614

Identifier: 237812614

GI number: 237812614

Start: 2324286

End: 2325296

Strand: Reverse

Name: 237812614

Synonym: GBP346_A2364

Alternate gene names: NA

Gene position: 2325296-2324286 (Counterclockwise)

Preceding gene: 237812615

Following gene: 237812613

Centisome position: 56.73

GC content: 74.78

Gene sequence:

>1011_bases
ATGGACTGTAACGAAACGCGTGCGCTGCTCGGCGCGGATGTCGACCACGAGCTTTCCGCGGCCGATGCGTGGCGGATCGC
GCGGCACGTCGGCGGGTGCGGCGCGTGCCGTCTCGAGCGCGAGCGGCTCGTCGCGCTTCGCCGCGCGATGCGGCAGGCGG
AGTACCATCGCGCGCCGGGCGCGCTGCGCGCCCGCATTGCCGCGGGCTTGCCGTTGGCGGCGGCGCCGTTCGCGCAAGCG
CCGGTTCAGGATCTGCCCGCTTCGGACGTGCCGGTTTCGGACGTGCCGGTCTCGGATGCGCCTGAACAGGACACGCCCTC
GCAGGACATGCGCGCGCCCAACAAACCGGCGGTGGATCGCCCGCCCGAAGCGAAGCCGATGTTCGGCGCCGACGCGCGCG
GCGGCGCGCGGGCGGGCCGCTGGTTCGCGCGGCCGGGCTCGCGCGGCCCGACGCTTGATCGGCCGGGGCCGGGGCCGGGG
CCGCGCGCCGCGGCGCTGCCCGGCCTGGGCTGGGGCGTCGCGCTGACGGTCGCGCTGGCGGCTGCGGCCGGCTTCGCGCT
CGATGCGCGCCGCGCGGCGACGGAGCACGCCGTCGACGAAATCGTCGCGAGCCACGTGCGAGCCGGGCTGTCGTCACGGG
ACATCGACGTGATCTCGACCGATCGCCATACCGTCAAGCCGTGGTTCAACGGCCGCCTCGATTTCGCGCCACCCGTCGTC
GACCTGAGCGCAAGCGGCTTCGCGCTGGCGGGCGGCCGGCTCGACTATGTCGGGCAGCGCCGCGTCGCGGTGCTCGTCTA
CCGCTACCGGCAGCATGTGATCGACGTCTACGTGTGGCCGTCGGGCGAGGGCGGGGCGAGGCCCTACGCGACCGTGTCGC
AGGGTTATGCGCTCGATCGCTGGGAGGCGGCCGGCATGACGTGGTGGGCGGTAACCGACGCGGAGCCGTCCGCGCTCGCG
GCGTTCAGGACGGCGCTCGATGCGCGCGTGGCCGCGCCGCGAACCGAGTGA

Upstream 100 bases:

>100_bases
GCGCCCGCGTCGCGGTCGGCCGCGCAGGTGTATCCGGGCGAGCGCGCGGCGCAGCGCGAACGCGGCGCGCCGGCATCCGG
AACCGCATCGGAGGCCATCG

Downstream 100 bases:

>100_bases
CGGCGTTTTGGCGATGCGACCCCGTCCCCGGGCCGGCGGTGCCCGCGCGGCTGCCGCGCCGGCGTGGCCGGCCGAACGCC
CGCCGGCCTGCCCAAGTTGT

Product: hypothetical protein

Products: NA

Alternate protein names: Transmembrane Transcriptional Regulator; Anti-Sigma Factor; Transmembrane Protein

Number of amino acids: Translated: 336; Mature: 336

Protein sequence:

>336_residues
MDCNETRALLGADVDHELSAADAWRIARHVGGCGACRLERERLVALRRAMRQAEYHRAPGALRARIAAGLPLAAAPFAQA
PVQDLPASDVPVSDVPVSDAPEQDTPSQDMRAPNKPAVDRPPEAKPMFGADARGGARAGRWFARPGSRGPTLDRPGPGPG
PRAAALPGLGWGVALTVALAAAAGFALDARRAATEHAVDEIVASHVRAGLSSRDIDVISTDRHTVKPWFNGRLDFAPPVV
DLSASGFALAGGRLDYVGQRRVAVLVYRYRQHVIDVYVWPSGEGGARPYATVSQGYALDRWEAAGMTWWAVTDAEPSALA
AFRTALDARVAAPRTE

Sequences:

>Translated_336_residues
MDCNETRALLGADVDHELSAADAWRIARHVGGCGACRLERERLVALRRAMRQAEYHRAPGALRARIAAGLPLAAAPFAQA
PVQDLPASDVPVSDVPVSDAPEQDTPSQDMRAPNKPAVDRPPEAKPMFGADARGGARAGRWFARPGSRGPTLDRPGPGPG
PRAAALPGLGWGVALTVALAAAAGFALDARRAATEHAVDEIVASHVRAGLSSRDIDVISTDRHTVKPWFNGRLDFAPPVV
DLSASGFALAGGRLDYVGQRRVAVLVYRYRQHVIDVYVWPSGEGGARPYATVSQGYALDRWEAAGMTWWAVTDAEPSALA
AFRTALDARVAAPRTE
>Mature_336_residues
MDCNETRALLGADVDHELSAADAWRIARHVGGCGACRLERERLVALRRAMRQAEYHRAPGALRARIAAGLPLAAAPFAQA
PVQDLPASDVPVSDVPVSDAPEQDTPSQDMRAPNKPAVDRPPEAKPMFGADARGGARAGRWFARPGSRGPTLDRPGPGPG
PRAAALPGLGWGVALTVALAAAAGFALDARRAATEHAVDEIVASHVRAGLSSRDIDVISTDRHTVKPWFNGRLDFAPPVV
DLSASGFALAGGRLDYVGQRRVAVLVYRYRQHVIDVYVWPSGEGGARPYATVSQGYALDRWEAAGMTWWAVTDAEPSALA
AFRTALDARVAAPRTE

Specific function: Unknown

COG id: COG5662

COG function: function code K; Predicted transmembrane transcriptional regulator (anti-sigma factor)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 35694; Mature: 35694

Theoretical pI: Translated: 8.48; Mature: 8.48

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDCNETRALLGADVDHELSAADAWRIARHVGGCGACRLERERLVALRRAMRQAEYHRAPG
CCCCHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCH
ALRARIAAGLPLAAAPFAQAPVQDLPASDVPVSDVPVSDAPEQDTPSQDMRAPNKPAVDR
HHHHHHHCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCC
PPEAKPMFGADARGGARAGRWFARPGSRGPTLDRPGPGPGPRAAALPGLGWGVALTVALA
CCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHH
AAAGFALDARRAATEHAVDEIVASHVRAGLSSRDIDVISTDRHTVKPWFNGRLDFAPPVV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCEECCCCCCCCCCCCCEE
DLSASGFALAGGRLDYVGQRRVAVLVYRYRQHVIDVYVWPSGEGGARPYATVSQGYALDR
EECCCCEEEECCCCCCCCCCHHHHHHHHHHHCEEEEEEEECCCCCCCCCEEHHCCCEECC
WEAAGMTWWAVTDAEPSALAAFRTALDARVAAPRTE
HHHCCEEEEEEECCCHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MDCNETRALLGADVDHELSAADAWRIARHVGGCGACRLERERLVALRRAMRQAEYHRAPG
CCCCHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCH
ALRARIAAGLPLAAAPFAQAPVQDLPASDVPVSDVPVSDAPEQDTPSQDMRAPNKPAVDR
HHHHHHHCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCC
PPEAKPMFGADARGGARAGRWFARPGSRGPTLDRPGPGPGPRAAALPGLGWGVALTVALA
CCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHH
AAAGFALDARRAATEHAVDEIVASHVRAGLSSRDIDVISTDRHTVKPWFNGRLDFAPPVV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCEECCCCCCCCCCCCCEE
DLSASGFALAGGRLDYVGQRRVAVLVYRYRQHVIDVYVWPSGEGGARPYATVSQGYALDR
EECCCCEEEECCCCCCCCCCHHHHHHHHHHHCEEEEEEEECCCCCCCCCEEHHCCCEECC
WEAAGMTWWAVTDAEPSALAAFRTALDARVAAPRTE
HHHCCEEEEEEECCCHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA