Definition Burkholderia pseudomallei MSHR346 chromosome I, complete genome.
Accession NC_012695
Length 4,098,576

Click here to switch to the map view.

The map label for this gene is 237812555

Identifier: 237812555

GI number: 237812555

Start: 2272731

End: 2273591

Strand: Direct

Name: 237812555

Synonym: GBP346_A2304

Alternate gene names: NA

Gene position: 2272731-2273591 (Clockwise)

Preceding gene: 237812553

Following gene: 237812561

Centisome position: 55.45

GC content: 71.89

Gene sequence:

>861_bases
ATGCGACTCATCAGTTGGAACGTCCAATGGGGACGGGACGCGAACGGAACGGTCGACCTCGCGCGCACCGTCGACGCCGC
ACGCGGCCTCGGCGATTTCGACGTGCTGTGCGCGCAGGAGCTCACACGCGGCTTTCACGCGCTGCCGGGCGGCCCAAGCG
GCGATCAGTACGCCGAGCTGGCCGCGCTCCTGCCGGGTTACGCGGTATTCGACGCGATCGGCGTCGATCTGCCGCCGCTC
GAGCCGGGCGCGCCGCGCCGGCAATTCGGCAACGCGCTCGCCACGCGGCTGCCCGTCGAGCGCGCCCTGCGCCACGCGTT
GCCGTGGCCGGCGAGCGCCGCCGCGCCGTCGATGCCCCGCTGCGCGCTCGAAGTCACGCTGCGCGCGCCGTTCGGGCCGC
TGCGCGTCGTCGTCACGCATCTCGAATACTATTCGGCGCAGCAGCGGCTCGCACAAGTCGACGCGCTGCGGCGCCTGCAT
CGCGAGGCGGCCGCGCATGCGCGCGCGAGCGCGCCGCCGGAAACGCCGGCAAGCCCGTTCGCGCCGTCGGCGCGCGCGGC
CGACGCCATCGTCTGCGGCGACTTCAACAGCGCGTACCGCAGCGACGCGTACCAGCGCTTTCTCGCGCCGTTTCCGGATG
CGCCGCGCTTCGTCGACGCCTGGCTCGCGCGCCATCCGGGAAAGACGCCGCCGATGACGGCGGGCGTCTACGACACCGCG
CAATGGAGCGAGGGGCCGATGACGTGCGACTTCGCGTTCGTCACCGATACGCTCGTTCGCCGCCTATCGCGCTGCGAAAT
CGACGGGACGGTGCGTGCGTCCGATCATCAGCCGATCGTGCTCGAATTGAGCGACGCGTAG

Upstream 100 bases:

>100_bases
GAGAGGGGGACGGCTTCTGACACCAGCTTTTCCTGACGAACGATTGTGGGGGAAAGGCGAGATTGTAGACGAACGCCCGC
CAAGCAACGGAGATTCGACG

Downstream 100 bases:

>100_bases
CGACGCATAGCGGCGCGACGCGCAAGCGGACCGAAAGGGATCGAGCAGCGCGAGCGGCTCGAGCGGTGCAAATCGACGCC
CGGCAAGCCGTGGCTGGCGA

Product: endonuclease/exonuclease/phosphatase family protein

Products: NA

Alternate protein names: Metal-Dependent Hydrolase; Endonuclease/Exonuclease/Phosphatase Family Protein; Endonuclease / Exonuclease / Phosphatase

Number of amino acids: Translated: 286; Mature: 286

Protein sequence:

>286_residues
MRLISWNVQWGRDANGTVDLARTVDAARGLGDFDVLCAQELTRGFHALPGGPSGDQYAELAALLPGYAVFDAIGVDLPPL
EPGAPRRQFGNALATRLPVERALRHALPWPASAAAPSMPRCALEVTLRAPFGPLRVVVTHLEYYSAQQRLAQVDALRRLH
REAAAHARASAPPETPASPFAPSARAADAIVCGDFNSAYRSDAYQRFLAPFPDAPRFVDAWLARHPGKTPPMTAGVYDTA
QWSEGPMTCDFAFVTDTLVRRLSRCEIDGTVRASDHQPIVLELSDA

Sequences:

>Translated_286_residues
MRLISWNVQWGRDANGTVDLARTVDAARGLGDFDVLCAQELTRGFHALPGGPSGDQYAELAALLPGYAVFDAIGVDLPPL
EPGAPRRQFGNALATRLPVERALRHALPWPASAAAPSMPRCALEVTLRAPFGPLRVVVTHLEYYSAQQRLAQVDALRRLH
REAAAHARASAPPETPASPFAPSARAADAIVCGDFNSAYRSDAYQRFLAPFPDAPRFVDAWLARHPGKTPPMTAGVYDTA
QWSEGPMTCDFAFVTDTLVRRLSRCEIDGTVRASDHQPIVLELSDA
>Mature_286_residues
MRLISWNVQWGRDANGTVDLARTVDAARGLGDFDVLCAQELTRGFHALPGGPSGDQYAELAALLPGYAVFDAIGVDLPPL
EPGAPRRQFGNALATRLPVERALRHALPWPASAAAPSMPRCALEVTLRAPFGPLRVVVTHLEYYSAQQRLAQVDALRRLH
REAAAHARASAPPETPASPFAPSARAADAIVCGDFNSAYRSDAYQRFLAPFPDAPRFVDAWLARHPGKTPPMTAGVYDTA
QWSEGPMTCDFAFVTDTLVRRLSRCEIDGTVRASDHQPIVLELSDA

Specific function: Unknown

COG id: COG3568

COG function: function code R; Metal-dependent hydrolase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30976; Mature: 30976

Theoretical pI: Translated: 6.62; Mature: 6.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLISWNVQWGRDANGTVDLARTVDAARGLGDFDVLCAQELTRGFHALPGGPSGDQYAEL
CCEEEECCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHH
AALLPGYAVFDAIGVDLPPLEPGAPRRQFGNALATRLPVERALRHALPWPASAAAPSMPR
HHHCCCHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCCCC
CALEVTLRAPFGPLRVVVTHLEYYSAQQRLAQVDALRRLHREAAAHARASAPPETPASPF
EEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
APSARAADAIVCGDFNSAYRSDAYQRFLAPFPDAPRFVDAWLARHPGKTPPMTAGVYDTA
CCCCCCCCEEEECCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCC
QWSEGPMTCDFAFVTDTLVRRLSRCEIDGTVRASDHQPIVLELSDA
CCCCCCCEEEHHHHHHHHHHHHHHCCCCCEEEECCCCCEEEEECCC
>Mature Secondary Structure
MRLISWNVQWGRDANGTVDLARTVDAARGLGDFDVLCAQELTRGFHALPGGPSGDQYAEL
CCEEEECCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHH
AALLPGYAVFDAIGVDLPPLEPGAPRRQFGNALATRLPVERALRHALPWPASAAAPSMPR
HHHCCCHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCCCC
CALEVTLRAPFGPLRVVVTHLEYYSAQQRLAQVDALRRLHREAAAHARASAPPETPASPF
EEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
APSARAADAIVCGDFNSAYRSDAYQRFLAPFPDAPRFVDAWLARHPGKTPPMTAGVYDTA
CCCCCCCCEEEECCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCC
QWSEGPMTCDFAFVTDTLVRRLSRCEIDGTVRASDHQPIVLELSDA
CCCCCCCEEEHHHHHHHHHHHHHHCCCCCEEEECCCCCEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA