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The map label for this gene is yoaA [H]

Identifier: 237812529

GI number: 237812529

Start: 2245385

End: 2247643

Strand: Reverse

Name: yoaA [H]

Synonym: GBP346_A2278

Alternate gene names: 237812529

Gene position: 2247643-2245385 (Counterclockwise)

Preceding gene: 237812530

Following gene: 237812527

Centisome position: 54.84

GC content: 69.63

Gene sequence:

>2259_bases
TTGAATTCACCGCTTGATGCCCATCCCGACGCGCGGCGCGACGATTCGTCCGCCGCACGTTCCCCCACGTCCGGCGCCGC
CACGGGCGCGTACACGCCGAGCGTAAAGCGTATCGTCGAGCTTGACGCCATCTTCGGCGAGGGCGGCCTGTTTGCACGCG
CGCTCGACAACTATCGTCCGCGCGCTTCGCAGATCGACATGGCGCGCGCCGTTGCCGCCGCGATGGAGGCGTCGGGCAAG
CTGATGCCGGAGCCCGAGATCTTCGAGACGCGCAAGCGCCCCGCGCGGCGCATGCAGGACGGCGCAGCCGCCGGCCGTGA
CGATGCGTGCGCCGCGCCGCCCGGCGACGAGAGCGCCGACAGCGGCGACAATACGTTGATCGTCGAGGCCGGCACCGGCA
CCGGCAAGACGTATGCATACCTCGTCCCGGCGATGCTCTGGGGCGGCAAGGTGATCGTGTCGACGGGCACGAAGCACCTG
CAGGATCAATTGTTCCAGCGCGACATCCCGACGGTGCGCGACGCGCTCGCGGTGCCGGTGACGGTCGCGATGCTCAAGGG
GCGCGCGAACTACCTGTGCCACTACTATCTGCAGCGGACCGCCGACAACGGCCGCCTGCCGTCGCGGCAGGACACCGCGT
ACCTGCAGGACATCCTCCGCTTCGCGAAGATCACCAGGAGCGGCGACAAGGCCGAGCTCGCGAGCGTGCCGGAGACGTCG
CCCGTGTGGTCGATGGTCACGTCCACGCGCGACAACTGCCTCGGCCAGGAATGTCCGCATTACAAGGACTGCTTCGTGAT
GCAGGCGCGCCGCGAGGCGCAGCAGGCGGATATCGTCGTCGTCAATCACCATCTGTTCTTCGCGGACATCATGTTGCGCG
ACACCGGGATGGCCGAATTGCTGCCGAGCGCGAACACGATCATCTTCGACGAGGCGCACCAGTTGCCCGAGACCGCGACG
CTCTTTTTCGGCGAGACGCTATCGACGACGCAACTGCTCGAGCTCGCGCGCGACGCGGTGGCCGAAGGCCTCGCGCACGC
GCGCGACGCGGTCGAATGGGTGAAGCTCGGCGGCGCGCTCGAGCGTGCGGCGCGCGACGTGCGGCTCGCGTTCGCCGACG
ACGGCATCGTCCGGATGTCGCTCGCGCAGCTCGGCGACGGTCATCCGCTGTTCGGCGCGCTCGATGCGCTCGACGCGGCG
CTCGATGCGCTGTCGACGGCGCTTGCGGGGCAGGCGGAGCGTGCCGAATCGATCGCCGCGTGCCAGCGCCGCGCGCGCGA
GCTGCAGGATCTGCTGGCGGGCTGGGTCGCGCCCGGCGCGCAGGACGGCGCGGCCGACGCGGCCGACGCGAAGCCCGCCG
CGCAAACGGGCGAGCACGGCGATCCGGCCGAGAAGGTGCGTTGGGTCGAGGTGTTCGCGCATACCGTTCAGTTGCACGAA
ACGCCGCTGTCGGTCGCGCCGATTTTCGCGAAGCAGCGCGCGGGCGTGCCGCGCGCGTGGATCTTCACGTCGGCGACGCT
GTCGGTGCGTGGCGATTTCACGCACTACGCGGCGCAGATGGGCCTCAGTTCGCGCCGTTCGATGACGCTGCCGAGCCCGT
TCGACTATCAGGCGCAAGGGCTTCTGTACGTGCCGAGGAACCTGCCGCAGCCGTCGTCGCCCGCGTTCACCGACGCGGTG
TTCGACGCCGCGCTGCCGGCGATCGAGGCGTCGGGCGGCGGCGTGTTCGTGCTGTGCACGACGCTGCGCGCGGTCGACCG
AATCGCGATGAAGTTGCGCGACACGATCGACGCGCGCGGCTGGAGCACGCCGCTCCTCGTACAGGGCGATGCGAGCCGCA
CCGAACTGCTCGACCGCTTTCGCGCCTACGGCAACGCGATTCTCGTCGGCAGCCAGAGCTTCTGGGAAGGCGTCGACGTG
CGCGGCGACGCGCTGTCGCTCGTCGTGATCGACAAGCTGCCGTTCGCGCCGCCCGACGATCCGGTGCTCGCCGCGCGGCT
CGATGCGCTGACGAAAAAAGGGCTGAGCCCGTTCGCCGCCCATCAGTTGCCGCAGGCCGTCATCACGCTGAAGCAGGGGG
CGGGGCGGCTGATTCGCGCGGAGACGGATCGCGGCGTGCTGATGATCTGCGACACGCGCCTCGTCGACAAGCCGTATGGC
CGGCGCATCTGGCAGAGCCTGCCGCCTTTCAAGCGCACGCGCGAGATCGACGTGGTGCGCGAGTTCTTCGCCGAGCGGCG
CGAAGCCGAGCAGGCGTGA

Upstream 100 bases:

>100_bases
TGCTGCAATCGCAGCTCGAACCGGATAAGCGCGCCTGACGCGCGGCCTGGCAAGCGCCGGCGCCGCGGCAGGCGCCGGAT
GATATTAGGAACCGCTTGCC

Downstream 100 bases:

>100_bases
GCGCGCAGGCTGGCGGCGTGGCGTGACGCAACGCGCGCCCGCCGCGCGACGCGCGCCGTGACAGGTGCGCCGCGCGCGCG
AAAAGAAAAACCCGGCTCGA

Product: helicase c2

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 752; Mature: 752

Protein sequence:

>752_residues
MNSPLDAHPDARRDDSSAARSPTSGAATGAYTPSVKRIVELDAIFGEGGLFARALDNYRPRASQIDMARAVAAAMEASGK
LMPEPEIFETRKRPARRMQDGAAAGRDDACAAPPGDESADSGDNTLIVEAGTGTGKTYAYLVPAMLWGGKVIVSTGTKHL
QDQLFQRDIPTVRDALAVPVTVAMLKGRANYLCHYYLQRTADNGRLPSRQDTAYLQDILRFAKITRSGDKAELASVPETS
PVWSMVTSTRDNCLGQECPHYKDCFVMQARREAQQADIVVVNHHLFFADIMLRDTGMAELLPSANTIIFDEAHQLPETAT
LFFGETLSTTQLLELARDAVAEGLAHARDAVEWVKLGGALERAARDVRLAFADDGIVRMSLAQLGDGHPLFGALDALDAA
LDALSTALAGQAERAESIAACQRRARELQDLLAGWVAPGAQDGAADAADAKPAAQTGEHGDPAEKVRWVEVFAHTVQLHE
TPLSVAPIFAKQRAGVPRAWIFTSATLSVRGDFTHYAAQMGLSSRRSMTLPSPFDYQAQGLLYVPRNLPQPSSPAFTDAV
FDAALPAIEASGGGVFVLCTTLRAVDRIAMKLRDTIDARGWSTPLLVQGDASRTELLDRFRAYGNAILVGSQSFWEGVDV
RGDALSLVVIDKLPFAPPDDPVLAARLDALTKKGLSPFAAHQLPQAVITLKQGAGRLIRAETDRGVLMICDTRLVDKPYG
RRIWQSLPPFKRTREIDVVREFFAERREAEQA

Sequences:

>Translated_752_residues
MNSPLDAHPDARRDDSSAARSPTSGAATGAYTPSVKRIVELDAIFGEGGLFARALDNYRPRASQIDMARAVAAAMEASGK
LMPEPEIFETRKRPARRMQDGAAAGRDDACAAPPGDESADSGDNTLIVEAGTGTGKTYAYLVPAMLWGGKVIVSTGTKHL
QDQLFQRDIPTVRDALAVPVTVAMLKGRANYLCHYYLQRTADNGRLPSRQDTAYLQDILRFAKITRSGDKAELASVPETS
PVWSMVTSTRDNCLGQECPHYKDCFVMQARREAQQADIVVVNHHLFFADIMLRDTGMAELLPSANTIIFDEAHQLPETAT
LFFGETLSTTQLLELARDAVAEGLAHARDAVEWVKLGGALERAARDVRLAFADDGIVRMSLAQLGDGHPLFGALDALDAA
LDALSTALAGQAERAESIAACQRRARELQDLLAGWVAPGAQDGAADAADAKPAAQTGEHGDPAEKVRWVEVFAHTVQLHE
TPLSVAPIFAKQRAGVPRAWIFTSATLSVRGDFTHYAAQMGLSSRRSMTLPSPFDYQAQGLLYVPRNLPQPSSPAFTDAV
FDAALPAIEASGGGVFVLCTTLRAVDRIAMKLRDTIDARGWSTPLLVQGDASRTELLDRFRAYGNAILVGSQSFWEGVDV
RGDALSLVVIDKLPFAPPDDPVLAARLDALTKKGLSPFAAHQLPQAVITLKQGAGRLIRAETDRGVLMICDTRLVDKPYG
RRIWQSLPPFKRTREIDVVREFFAERREAEQA
>Mature_752_residues
MNSPLDAHPDARRDDSSAARSPTSGAATGAYTPSVKRIVELDAIFGEGGLFARALDNYRPRASQIDMARAVAAAMEASGK
LMPEPEIFETRKRPARRMQDGAAAGRDDACAAPPGDESADSGDNTLIVEAGTGTGKTYAYLVPAMLWGGKVIVSTGTKHL
QDQLFQRDIPTVRDALAVPVTVAMLKGRANYLCHYYLQRTADNGRLPSRQDTAYLQDILRFAKITRSGDKAELASVPETS
PVWSMVTSTRDNCLGQECPHYKDCFVMQARREAQQADIVVVNHHLFFADIMLRDTGMAELLPSANTIIFDEAHQLPETAT
LFFGETLSTTQLLELARDAVAEGLAHARDAVEWVKLGGALERAARDVRLAFADDGIVRMSLAQLGDGHPLFGALDALDAA
LDALSTALAGQAERAESIAACQRRARELQDLLAGWVAPGAQDGAADAADAKPAAQTGEHGDPAEKVRWVEVFAHTVQLHE
TPLSVAPIFAKQRAGVPRAWIFTSATLSVRGDFTHYAAQMGLSSRRSMTLPSPFDYQAQGLLYVPRNLPQPSSPAFTDAV
FDAALPAIEASGGGVFVLCTTLRAVDRIAMKLRDTIDARGWSTPLLVQGDASRTELLDRFRAYGNAILVGSQSFWEGVDV
RGDALSLVVIDKLPFAPPDDPVLAARLDALTKKGLSPFAAHQLPQAVITLKQGAGRLIRAETDRGVLMICDTRLVDKPYG
RRIWQSLPPFKRTREIDVVREFFAERREAEQA

Specific function: Unknown

COG id: COG1199

COG function: function code KL; Rad3-related DNA helicases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 helicase ATP-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1788110, Length=713, Percent_Identity=41.234221598878, Blast_Score=490, Evalue=1e-139,
Organism=Escherichia coli, GI1787018, Length=241, Percent_Identity=36.5145228215768, Blast_Score=116, Evalue=6e-27,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014001
- InterPro:   IPR010614
- InterPro:   IPR014013
- InterPro:   IPR006555
- InterPro:   IPR006935 [H]

Pfam domain/function: PF06733 DEAD_2; PF04851 ResIII [H]

EC number: =3.6.4.12 [H]

Molecular weight: Translated: 81462; Mature: 81462

Theoretical pI: Translated: 5.94; Mature: 5.94

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNSPLDAHPDARRDDSSAARSPTSGAATGAYTPSVKRIVELDAIFGEGGLFARALDNYRP
CCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHCCCC
RASQIDMARAVAAAMEASGKLMPEPEIFETRKRPARRMQDGAAAGRDDACAAPPGDESAD
CHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC
SGDNTLIVEAGTGTGKTYAYLVPAMLWGGKVIVSTGTKHLQDQLFQRDIPTVRDALAVPV
CCCCEEEEECCCCCCCCHHHHHHHHHHCCEEEEECCHHHHHHHHHHCCCHHHHHHHHHHH
TVAMLKGRANYLCHYYLQRTADNGRLPSRQDTAYLQDILRFAKITRSGDKAELASVPETS
HHHHHHCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHCCCCCCC
PVWSMVTSTRDNCLGQECPHYKDCFVMQARREAQQADIVVVNHHLFFADIMLRDTGMAEL
HHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCEEEEECHHEEHHHHHHCCCHHHH
LPSANTIIFDEAHQLPETATLFFGETLSTTQLLELARDAVAEGLAHARDAVEWVKLGGAL
CCCCCEEEECCHHCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ERAARDVRLAFADDGIVRMSLAQLGDGHPLFGALDALDAALDALSTALAGQAERAESIAA
HHHHHHEEEEECCCCEEEHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
CQRRARELQDLLAGWVAPGAQDGAADAADAKPAAQTGEHGDPAEKVRWVEVFAHTVQLHE
HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHC
TPLSVAPIFAKQRAGVPRAWIFTSATLSVRGDFTHYAAQMGLSSRRSMTLPSPFDYQAQG
CCCCHHHHHHHHHCCCCEEEEEEEEEEEECCCHHHHHHHHCCCCCCCCCCCCCCCCCCCC
LLYVPRNLPQPSSPAFTDAVFDAALPAIEASGGGVFVLCTTLRAVDRIAMKLRDTIDARG
EEECCCCCCCCCCCCHHHHHHHHHHCCEECCCCCEEEHHHHHHHHHHHHHHHHHHHHCCC
WSTPLLVQGDASRTELLDRFRAYGNAILVGSQSFWEGVDVRGDALSLVVIDKLPFAPPDD
CCCCEEEECCCHHHHHHHHHHHCCCEEEEECHHHHCCCCCCCCEEEEEEEECCCCCCCCC
PVLAARLDALTKKGLSPFAAHQLPQAVITLKQGAGRLIRAETDRGVLMICDTRLVDKPYG
CHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCEEEEECCCCEEEEECCHHHCCCHH
RRIWQSLPPFKRTREIDVVREFFAERREAEQA
HHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MNSPLDAHPDARRDDSSAARSPTSGAATGAYTPSVKRIVELDAIFGEGGLFARALDNYRP
CCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHCCCC
RASQIDMARAVAAAMEASGKLMPEPEIFETRKRPARRMQDGAAAGRDDACAAPPGDESAD
CHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC
SGDNTLIVEAGTGTGKTYAYLVPAMLWGGKVIVSTGTKHLQDQLFQRDIPTVRDALAVPV
CCCCEEEEECCCCCCCCHHHHHHHHHHCCEEEEECCHHHHHHHHHHCCCHHHHHHHHHHH
TVAMLKGRANYLCHYYLQRTADNGRLPSRQDTAYLQDILRFAKITRSGDKAELASVPETS
HHHHHHCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHCCCCCCC
PVWSMVTSTRDNCLGQECPHYKDCFVMQARREAQQADIVVVNHHLFFADIMLRDTGMAEL
HHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCEEEEECHHEEHHHHHHCCCHHHH
LPSANTIIFDEAHQLPETATLFFGETLSTTQLLELARDAVAEGLAHARDAVEWVKLGGAL
CCCCCEEEECCHHCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ERAARDVRLAFADDGIVRMSLAQLGDGHPLFGALDALDAALDALSTALAGQAERAESIAA
HHHHHHEEEEECCCCEEEHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
CQRRARELQDLLAGWVAPGAQDGAADAADAKPAAQTGEHGDPAEKVRWVEVFAHTVQLHE
HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHC
TPLSVAPIFAKQRAGVPRAWIFTSATLSVRGDFTHYAAQMGLSSRRSMTLPSPFDYQAQG
CCCCHHHHHHHHHCCCCEEEEEEEEEEEECCCHHHHHHHHCCCCCCCCCCCCCCCCCCCC
LLYVPRNLPQPSSPAFTDAVFDAALPAIEASGGGVFVLCTTLRAVDRIAMKLRDTIDARG
EEECCCCCCCCCCCCHHHHHHHHHHCCEECCCCCEEEHHHHHHHHHHHHHHHHHHHHCCC
WSTPLLVQGDASRTELLDRFRAYGNAILVGSQSFWEGVDVRGDALSLVVIDKLPFAPPDD
CCCCEEEECCCHHHHHHHHHHHCCCEEEEECHHHHCCCCCCCCEEEEEEEECCCCCCCCC
PVLAARLDALTKKGLSPFAAHQLPQAVITLKQGAGRLIRAETDRGVLMICDTRLVDKPYG
CHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCEEEEECCCCEEEEECCHHHCCCHH
RRIWQSLPPFKRTREIDVVREFFAERREAEQA
HHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9097040; 9278503 [H]