Click here to switch to the map view.

The map label for this gene is yhfC [H]

Identifier: 237812473

GI number: 237812473

Start: 2182395

End: 2183183

Strand: Reverse

Name: yhfC [H]

Synonym: GBP346_A2222

Alternate gene names: 237812473

Gene position: 2183183-2182395 (Counterclockwise)

Preceding gene: 237812474

Following gene: 237812472

Centisome position: 53.27

GC content: 70.09

Gene sequence:

>789_bases
ATGACCGTTGCTCCCGTCACGCTGGCGGCGCTCGTCATCGCCACGCTTGTGGTGGCGTTGCTGCCGATCGGCCTCTATCG
ATTCCTCCGCCAGCCGAGGGCGCTCGACCGGCGCGACGCGCTCATCGGCGTCGTCGTCTACACGGTGTTCGCGACGCTGC
TCGAGCGCGGCCTCTACGCGCTGCTGCTGAGCCAGCCGTCGGCCGTGACGTGGCTGTCGAAGCCCGTCACGTTCGCGGTG
TTCGGCACCGCCGTCGCCGCGCTGTTCGAGGAAGTCGGCCGCTATCTCGGGCTGCGCTGGCTCGCCAAGCGCTACGGCCC
ATCGGACGGCGACGCGCGGGGCCTGGCCAACGGCATCGGCCACGGCGGCGCGCAGGCGTGGTTCGTCGGCGTCGTCGTGC
TCGCCCAATGGGTCTATCTCGCGTGGCTCGCGAATCGCGGCGAGCTGAACGCGCAACTGCAGACGATGCCGGCCGATCTC
GCGCTGCGCATCCAGGTGATGCTCGCGACGATGTCGCCCGTGTCGGTCGCGGTGTCGGCGCTCGAGCGCATCGCGGCGTT
CGTCGTGCAGCTCGCGCTGTCCGTGCTGATGTGGCGCGGCATTCGCGCGAACAGGCGCTGGATCCTGCCCGCGATGATCG
TGCTGCATCCCGTGATCGATCTGCCGTCGCTCGTGTACAACGGCGGCGGCGTGCCGTTCGAATGGATGGTCGCGCTGTAT
CTGCTGCTCACCGCGGGCTTCGCCGGCGCGCTGATGAAACTGTGCCGGCCCGCGCGCGCCGCACGCTGA

Upstream 100 bases:

>100_bases
GCTGCCGGGCGAGCTTCACGTGCGCGCGTCGACGGCGAGCTGAGTTGAGTATCATTCGGGGCACGCACCGCGCCGGTGCG
CGTTTCGAACAAGGATTGTC

Downstream 100 bases:

>100_bases
ACCGTGTTCCGACGATGGACGATTATCAATACGATTGCGCGAGCGCCGAATTCGGCGAACTCGCGCGCGTGATCTGCGAT
CTCTTTCCCGAGCAGACGCG

Product: membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 262; Mature: 261

Protein sequence:

>262_residues
MTVAPVTLAALVIATLVVALLPIGLYRFLRQPRALDRRDALIGVVVYTVFATLLERGLYALLLSQPSAVTWLSKPVTFAV
FGTAVAALFEEVGRYLGLRWLAKRYGPSDGDARGLANGIGHGGAQAWFVGVVVLAQWVYLAWLANRGELNAQLQTMPADL
ALRIQVMLATMSPVSVAVSALERIAAFVVQLALSVLMWRGIRANRRWILPAMIVLHPVIDLPSLVYNGGGVPFEWMVALY
LLLTAGFAGALMKLCRPARAAR

Sequences:

>Translated_262_residues
MTVAPVTLAALVIATLVVALLPIGLYRFLRQPRALDRRDALIGVVVYTVFATLLERGLYALLLSQPSAVTWLSKPVTFAV
FGTAVAALFEEVGRYLGLRWLAKRYGPSDGDARGLANGIGHGGAQAWFVGVVVLAQWVYLAWLANRGELNAQLQTMPADL
ALRIQVMLATMSPVSVAVSALERIAAFVVQLALSVLMWRGIRANRRWILPAMIVLHPVIDLPSLVYNGGGVPFEWMVALY
LLLTAGFAGALMKLCRPARAAR
>Mature_261_residues
TVAPVTLAALVIATLVVALLPIGLYRFLRQPRALDRRDALIGVVVYTVFATLLERGLYALLLSQPSAVTWLSKPVTFAVF
GTAVAALFEEVGRYLGLRWLAKRYGPSDGDARGLANGIGHGGAQAWFVGVVVLAQWVYLAWLANRGELNAQLQTMPADLA
LRIQVMLATMSPVSVAVSALERIAAFVVQLALSVLMWRGIRANRRWILPAMIVLHPVIDLPSLVYNGGGVPFEWMVALYL
LLTAGFAGALMKLCRPARAAR

Specific function: Unknown

COG id: COG4377

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011397 [H]

Pfam domain/function: PF10086 DUF2324 [H]

EC number: NA

Molecular weight: Translated: 28404; Mature: 28273

Theoretical pI: Translated: 10.89; Mature: 10.89

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
TVAPVTLAALVIATLVVALLPIGLYRFLRQPRALDRRDALIGVVVYTVFATLLERGLYA
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
LLLSQPSAVTWLSKPVTFAVFGTAVAALFEEVGRYLGLRWLAKRYGPSDGDARGLANGIG
HHHCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCC
HGGAQAWFVGVVVLAQWVYLAWLANRGELNAQLQTMPADLALRIQVMLATMSPVSVAVSA
CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCHHHHHHHHHHHHHCCHHHHHHHH
LERIAAFVVQLALSVLMWRGIRANRRWILPAMIVLHPVIDLPSLVYNGGGVPFEWMVALY
HHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH
LLLTAGFAGALMKLCRPARAAR
HHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9579061; 9384377 [H]