| Definition | Burkholderia pseudomallei MSHR346 chromosome I, complete genome. |
|---|---|
| Accession | NC_012695 |
| Length | 4,098,576 |
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The map label for this gene is 237812458
Identifier: 237812458
GI number: 237812458
Start: 2171491
End: 2172111
Strand: Direct
Name: 237812458
Synonym: GBP346_A2207
Alternate gene names: NA
Gene position: 2171491-2172111 (Clockwise)
Preceding gene: 237812457
Following gene: 237812462
Centisome position: 52.98
GC content: 68.44
Gene sequence:
>621_bases GTGACGTATCTGGTGTTTTTCTGCGGCCACGCGGGCACCGGCAAGACGACGCTCGCGAAGCGGCTGATCCGCCCGCTGAT GAAGACGACGGGCGAAGCGTTCTGCCTGCTCGACAAGGACACGCTGTACGGCCGCTACAGCTCGGCCGCGATGGGCGCGC TCACGCACGATCCGAACGATCGCGACAGCCCGCTCTATCTGAAGCATCTGCGCGATCCCGAATACCAGGGGCTGCTCGAT ACCGCGCGCGAGAACCTGGAGCTCGGCATCAGCGCGATCGTCGTCGGCCCGCTATCGCGCGAGGTGCGCGACCGGCGCCT GTTCGATCGCGCGTGGCTCGGCATCGGGCCCGATGTCGAGCTGCGCATCGTGTGGGTTCACACGTCGGAGGAGACCGCGC ACGCGCGGATCGTCGCGCGCGGCAATCCGAACGACGCGTACAAGCTCGCGCACTGGGACGAATACCGGCAACGCCGCTTC ATCCCGACGGGCGAGCAATGCGAGGGCCTGCTGATGTTCGACAACACCGCGCCGTCGGATGCCGACATCGACGCACTGCG CGATCACATCGCGCCGCCGCCCGCGCGCGGCGTGTCGACGGTGCCGCCGCTGCCCGCCTGA
Upstream 100 bases:
>100_bases ATGCGATGTGGCTCGAAGCGAACGGCAATGTCCCGACGGGCGCCCCCGGCGACGCGCCTGACGCGGGCGAGCCCGCCACC GCGCCGGAGGGCCGACGTTC
Downstream 100 bases:
>100_bases CCCGGCGCGGCCGCGGGCGGCCGACCACGCCGGTCACCGCATCGCGCCGCGCCCACGACGAAACGCCGGGGCGGCCCCAC GGCCGTCCCGGCGTTTTTTC
Product: hypothetical protein
Products: NA
Alternate protein names: P-Loop ATPase Protein; ATP-Ase; Shikimate Kinase; Transcriptional Regulator
Number of amino acids: Translated: 206; Mature: 205
Protein sequence:
>206_residues MTYLVFFCGHAGTGKTTLAKRLIRPLMKTTGEAFCLLDKDTLYGRYSSAAMGALTHDPNDRDSPLYLKHLRDPEYQGLLD TARENLELGISAIVVGPLSREVRDRRLFDRAWLGIGPDVELRIVWVHTSEETAHARIVARGNPNDAYKLAHWDEYRQRRF IPTGEQCEGLLMFDNTAPSDADIDALRDHIAPPPARGVSTVPPLPA
Sequences:
>Translated_206_residues MTYLVFFCGHAGTGKTTLAKRLIRPLMKTTGEAFCLLDKDTLYGRYSSAAMGALTHDPNDRDSPLYLKHLRDPEYQGLLD TARENLELGISAIVVGPLSREVRDRRLFDRAWLGIGPDVELRIVWVHTSEETAHARIVARGNPNDAYKLAHWDEYRQRRF IPTGEQCEGLLMFDNTAPSDADIDALRDHIAPPPARGVSTVPPLPA >Mature_205_residues TYLVFFCGHAGTGKTTLAKRLIRPLMKTTGEAFCLLDKDTLYGRYSSAAMGALTHDPNDRDSPLYLKHLRDPEYQGLLDT ARENLELGISAIVVGPLSREVRDRRLFDRAWLGIGPDVELRIVWVHTSEETAHARIVARGNPNDAYKLAHWDEYRQRRFI PTGEQCEGLLMFDNTAPSDADIDALRDHIAPPPARGVSTVPPLPA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23036; Mature: 22905
Theoretical pI: Translated: 6.63; Mature: 6.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTYLVFFCGHAGTGKTTLAKRLIRPLMKTTGEAFCLLDKDTLYGRYSSAAMGALTHDPND CEEEEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCHHCCCCCCHHHCCCCCCCCC RDSPLYLKHLRDPEYQGLLDTARENLELGISAIVVGPLSREVRDRRLFDRAWLGIGPDVE CCCCEEEEECCCCCCCHHHHHHHHHHHCCEEEEEECCHHHHHHHHHHHHHHHCCCCCCCE LRIVWVHTSEETAHARIVARGNPNDAYKLAHWDEYRQRRFIPTGEQCEGLLMFDNTAPSD EEEEEEECCCCCCEEEEEEECCCCCCEEECCHHHHHHHCCCCCCCCCCEEEEECCCCCCC ADIDALRDHIAPPPARGVSTVPPLPA CCHHHHHHHCCCCCCCCCCCCCCCCC >Mature Secondary Structure TYLVFFCGHAGTGKTTLAKRLIRPLMKTTGEAFCLLDKDTLYGRYSSAAMGALTHDPND EEEEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCHHCCCCCCHHHCCCCCCCCC RDSPLYLKHLRDPEYQGLLDTARENLELGISAIVVGPLSREVRDRRLFDRAWLGIGPDVE CCCCEEEEECCCCCCCHHHHHHHHHHHCCEEEEEECCHHHHHHHHHHHHHHHCCCCCCCE LRIVWVHTSEETAHARIVARGNPNDAYKLAHWDEYRQRRFIPTGEQCEGLLMFDNTAPSD EEEEEEECCCCCCEEEEEEECCCCCCEEECCHHHHHHHCCCCCCCCCCEEEEECCCCCCC ADIDALRDHIAPPPARGVSTVPPLPA CCHHHHHHHCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA