| Definition | Burkholderia pseudomallei MSHR346 chromosome I, complete genome. |
|---|---|
| Accession | NC_012695 |
| Length | 4,098,576 |
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The map label for this gene is yiaY [H]
Identifier: 237812421
GI number: 237812421
Start: 2140076
End: 2140276
Strand: Reverse
Name: yiaY [H]
Synonym: GBP346_A2169
Alternate gene names: 237812421
Gene position: 2140276-2140076 (Counterclockwise)
Preceding gene: 237812422
Following gene: 237812420
Centisome position: 52.22
GC content: 63.18
Gene sequence:
>201_bases GTGTCGCTCGGCGGCGGCTCGTCGCACGACTACGCGAAGGGCATCGGGCTCGTCACCGCCGGCGGCGGACATATCCGCGA CTACGAGGGTATCGACAAATCGACGGTGCCGATGACGCCGTTGATTTCGATCAACACGACGGCGGGCACGGCGGCGGAGA TGACGCGCTTTTGCATCATCACGAATTCCAGCATCACGTGA
Upstream 100 bases:
>100_bases GCTTCAGGCCGCGATCTTTCCCGGCGCGCAGCCCAATCCGACCGACGTCAACGTTCACGACGGCGTTGAACTCTATCGGC GGGAAGGGTGCGATTTCATC
Downstream 100 bases:
>100_bases AGATGGCGATCGTCGACTGGCGTTGCACGCCGCTCATCGCGATCGACGACCCGAGCCTGATGGTGGCGATGCCGCCCGCG CTGACGGCCGCAACCGGCAT
Product: alcohol dehydrogenase, iron-containing
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 66; Mature: 65
Protein sequence:
>66_residues MSLGGGSSHDYAKGIGLVTAGGGHIRDYEGIDKSTVPMTPLISINTTAGTAAEMTRFCIITNSSIT
Sequences:
>Translated_66_residues MSLGGGSSHDYAKGIGLVTAGGGHIRDYEGIDKSTVPMTPLISINTTAGTAAEMTRFCIITNSSIT >Mature_65_residues SLGGGSSHDYAKGIGLVTAGGGHIRDYEGIDKSTVPMTPLISINTTAGTAAEMTRFCIITNSSIT
Specific function: Unknown
COG id: COG1454
COG function: function code C; Alcohol dehydrogenase, class IV
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the iron-containing alcohol dehydrogenase family [H]
Homologues:
Organism=Escherichia coli, GI48994951, Length=64, Percent_Identity=70.3125, Blast_Score=99, Evalue=4e-23, Organism=Saccharomyces cerevisiae, GI6321181, Length=64, Percent_Identity=57.8125, Blast_Score=79, Evalue=1e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001670 - InterPro: IPR018211 [H]
Pfam domain/function: PF00465 Fe-ADH [H]
EC number: =1.1.1.1 [H]
Molecular weight: Translated: 6746; Mature: 6615
Theoretical pI: Translated: 6.50; Mature: 6.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 4.5 %Met (Translated Protein) 6.1 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLGGGSSHDYAKGIGLVTAGGGHIRDYEGIDKSTVPMTPLISINTTAGTAAEMTRFCII CCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCEEEEEE TNSSIT ECCCCC >Mature Secondary Structure SLGGGSSHDYAKGIGLVTAGGGHIRDYEGIDKSTVPMTPLISINTTAGTAAEMTRFCII CCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCEEEEEE TNSSIT ECCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8041620; 9278503; 7768815 [H]