| Definition | Burkholderia pseudomallei MSHR346 chromosome I, complete genome. |
|---|---|
| Accession | NC_012695 |
| Length | 4,098,576 |
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The map label for this gene is 237812402
Identifier: 237812402
GI number: 237812402
Start: 2122876
End: 2123337
Strand: Reverse
Name: 237812402
Synonym: GBP346_A2150
Alternate gene names: NA
Gene position: 2123337-2122876 (Counterclockwise)
Preceding gene: 237812403
Following gene: 237812401
Centisome position: 51.81
GC content: 58.66
Gene sequence:
>462_bases ATGGAACACACGACGTCGATTGGATGGGCGGCTCGCTCGCATGCGCGATCCGAGCACGCGTGCGATCGGATTTCTCAATG GATTCTTGTTCTGATGCCGATCGTCTTCGTCGCGTTCTGCGTACTCCTGATTTCGCTCTGGTACATCGACATCTTGACCG GATGGCTGATCGCGGCTTTTGCGCTGCTCATTGAAGCCATGCTGATCGGCATCGGGTTTTTTGTCTTCGTGATGGTGCGG ATATCGCACCGGCGGCGGCGCGAGCGCGAGGCGAAGACGGCGTTGTGCCGCGCGAATCAGCCCGACGATGCCGATGTGCC GTTTCCGGTGGGATTCGACGGCGTGAAGACGGTTCATTGCATGTTTGGATCGGGGCAGGTCGGTGCGTTTCGGGTAAGCT GTTACAACACGAATTGCCCGTTGATGCGTGGAGCAACGGAAACCGAGCGATTGCCCGGGTAG
Upstream 100 bases:
>100_bases CTCGATTCGGCGAGCGGACACTTTTTCTCTCTGGATCGGGAGCGTATTGGGCAATGACGCCGCGCGACTTTCGCGGCGGA GCGATGGGGGATTGATTTTG
Downstream 100 bases:
>100_bases GCGGAGTGAGCGTAGGCATGCGACGCGCCATGACATGAAAAGCGAAAGCATATTGAAACCTTGAATATGCAATGGATGCG CTCGTGATTCGAAGCCGGTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 153; Mature: 153
Protein sequence:
>153_residues MEHTTSIGWAARSHARSEHACDRISQWILVLMPIVFVAFCVLLISLWYIDILTGWLIAAFALLIEAMLIGIGFFVFVMVR ISHRRRREREAKTALCRANQPDDADVPFPVGFDGVKTVHCMFGSGQVGAFRVSCYNTNCPLMRGATETERLPG
Sequences:
>Translated_153_residues MEHTTSIGWAARSHARSEHACDRISQWILVLMPIVFVAFCVLLISLWYIDILTGWLIAAFALLIEAMLIGIGFFVFVMVR ISHRRRREREAKTALCRANQPDDADVPFPVGFDGVKTVHCMFGSGQVGAFRVSCYNTNCPLMRGATETERLPG >Mature_153_residues MEHTTSIGWAARSHARSEHACDRISQWILVLMPIVFVAFCVLLISLWYIDILTGWLIAAFALLIEAMLIGIGFFVFVMVR ISHRRRREREAKTALCRANQPDDADVPFPVGFDGVKTVHCMFGSGQVGAFRVSCYNTNCPLMRGATETERLPG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17160; Mature: 17160
Theoretical pI: Translated: 8.14; Mature: 8.14
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.9 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 7.8 %Cys+Met (Translated Protein) 3.9 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 7.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEHTTSIGWAARSHARSEHACDRISQWILVLMPIVFVAFCVLLISLWYIDILTGWLIAAF CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ALLIEAMLIGIGFFVFVMVRISHRRRREREAKTALCRANQPDDADVPFPVGFDGVKTVHC HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHEE MFGSGQVGAFRVSCYNTNCPLMRGATETERLPG ECCCCCCCEEEEEEECCCCCCCCCCCHHCCCCC >Mature Secondary Structure MEHTTSIGWAARSHARSEHACDRISQWILVLMPIVFVAFCVLLISLWYIDILTGWLIAAF CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ALLIEAMLIGIGFFVFVMVRISHRRRREREAKTALCRANQPDDADVPFPVGFDGVKTVHC HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHEE MFGSGQVGAFRVSCYNTNCPLMRGATETERLPG ECCCCCCCEEEEEEECCCCCCCCCCCHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA