| Definition | Burkholderia pseudomallei MSHR346 chromosome I, complete genome. |
|---|---|
| Accession | NC_012695 |
| Length | 4,098,576 |
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The map label for this gene is 237812389
Identifier: 237812389
GI number: 237812389
Start: 2112937
End: 2113089
Strand: Direct
Name: 237812389
Synonym: GBP346_A2137
Alternate gene names: NA
Gene position: 2112937-2113089 (Clockwise)
Preceding gene: 237812388
Following gene: 237812392
Centisome position: 51.55
GC content: 62.75
Gene sequence:
>153_bases TTGAGGCTCCCCCGCGATCGCAACGGCGGCTTCGAGCCGATCCTGATTCTCAAGCACGGCGCCGCTTCACCGGCTTCGAC GAGCGCATTTAGCGCGAGATACGCCCGCGGCATGAGCGTGCGCGAGATTCAGACGTTTCTGGCCGAAAGCTAA
Upstream 100 bases:
>100_bases CTGAGCTACCCACCGGGCCAGCCCAAACCGCCCGGTCAGGTCAACGAACGCAACGGCGCCAGCGGCAAGACGGTCATCGC CGATCGCGGCCCGGTTCGGG
Downstream 100 bases:
>100_bases GGCACTGAGATCTCGCCCGATTTCATCAGCCCGGTCACCGACGAAGTGATGGCCGAGGCGCTGAGCTGGCAGAACCGCCC GCTCGAGGCGATATATCCGG
Product: ISPsy18, transposase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 50; Mature: 50
Protein sequence:
>50_residues MRLPRDRNGGFEPILILKHGAASPASTSAFSARYARGMSVREIQTFLAES
Sequences:
>Translated_50_residues MRLPRDRNGGFEPILILKHGAASPASTSAFSARYARGMSVREIQTFLAES >Mature_50_residues MRLPRDRNGGFEPILILKHGAASPASTSAFSARYARGMSVREIQTFLAES
Specific function: Unknown
COG id: COG3328
COG function: function code L; Transposase and inactivated derivatives
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 5465; Mature: 5465
Theoretical pI: Translated: 11.26; Mature: 11.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRLPRDRNGGFEPILILKHGAASPASTSAFSARYARGMSVREIQTFLAES CCCCCCCCCCCCEEEEEECCCCCCCCCCHHHHHHHCCCCHHHHHHHHCCC >Mature Secondary Structure MRLPRDRNGGFEPILILKHGAASPASTSAFSARYARGMSVREIQTFLAES CCCCCCCCCCCCEEEEEECCCCCCCCCCHHHHHHHCCCCHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA