| Definition | Burkholderia pseudomallei MSHR346 chromosome I, complete genome. |
|---|---|
| Accession | NC_012695 |
| Length | 4,098,576 |
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The map label for this gene is hutH [H]
Identifier: 237812349
GI number: 237812349
Start: 2062138
End: 2063772
Strand: Direct
Name: hutH [H]
Synonym: GBP346_A2097
Alternate gene names: 237812349
Gene position: 2062138-2063772 (Clockwise)
Preceding gene: 237812348
Following gene: 237812350
Centisome position: 50.31
GC content: 69.17
Gene sequence:
>1635_bases ATGCAACGCTTCCTCACGCGGAGCGCGATCGCGCTCGCACTTTTCGCCGCCGTCCCGGCCTTCGCGGACGTCACGCTCGA CGGGCGCTCCGTCACGCCGGAATCGATCGCGCGCATCGCCGACGGCGAAGCCGTGTCGATCGCGCCTGCCGCCCGCCAGC GGGTCGTCGCCGCGCACGAGGTGCTGCTGAAGGCCGCCGCGGCCGGCCAGCAGATCTACGGGCTGACGGTCGGCGTCGGC CTCAATAAAGACCGCGAGATGGTCGATGCGCACGGCAAGCTGTCGCAGGAGGTCATCGACGCGTCGACGCGCTTCAACAT CGGGCTGATCCATGCGCATTCGGGCAGCGTCGGGCCCGACATGAGCGTGCGCGTGGCCCGTGCCGCGATGGCCGCGCGCC TGAACGCGATGCTCGACGGCGGCGCCGGCGTGCAGCCGGCGATCGTCGACGCGTACGCGCAGTTCCTCAATCGCGGCGTC ACGCCGGCCATGCCCGCGGACGGCTCGATCGGCGAGGCCGACATCACGATCCTGAGCCATGTCGGCCTCGCGATGCTCGG CGAAGGCGACGTGTACTACCAGGGCCGCAAGCTCGCGGCCGCCGACGCGCTGAAGTTGGCCGGCATCGCGACGATCTATC CGTACGGCAAGGACGCGCTCGCGATCCTCAGCTCCAACGCGTATTCGGCCGGCATGGCGGCATTGGCGCTCACCGACATG GCGCGCCTCGCGCGGGTATCGAAGCTCGTGTTCGCGCTGGGCCTGCAGGGGCTGAACGGCAACGTATCGCCGTTCCGCGA GGACACGCTGGCGCTGCGGCCGTTCCCGGCCGCTCTGCGCGCCGGCGCGGCACTGCGCACGCTGCTCGCGGGCAGCAGCC TGTGGAACAAGGACCCGGATCGGCCGTTGCAGGACCCGCTCAGTTTCCGTTCCGGCGTCTACCTGCTCGGCGAAGAAGAT CGCACCTACGACGAAGCACGCGCGTTGCTGCAGGTCCAGCTCAATTCGAGCGACGACAATCCGGGTGTCGCGGTCAGTGT CGCGCCGAAGTCGAACCGCGCGCAGGATGCGGCCGGCTATGTCGACGGCGGCGGCGCGGTGCTGCCGAGCGCGAACTTCG AGCCGCTACCGTGGGTGCTCGCGTTCGAACAGCTCGGGCTCGCGCTCGGCCACAACGCGCTCGCGTCCGCGCAGCGCATC GTCAAGCTGAACGATTCGCACCTGAGCGGCCTGAGCCGCTTCCTCGGCACCGAGGAAACCGTACACGCGTTCGGCGCGAT GGAGAAGCCGCCAACCGCGCTCGCGATGACGATCAAAACGCTGGCGACGCCCGTATCGCTCGATTATCTGCCGGTGGCCG GCGGTATCGAGGACATCGCAACGAATGCGCCCGAAGTCGTACAGCGCGTGCAGAAGCAGATCGACGCGAGCTATACGCTG CTCGGCCTCGAACTCATCGAAGCCGCGCAGGCAATCGACCTGCGCCGGCGCAGGCAGCCGTCGTTCACGCTCGCGCCGGC CACGCAGCCGCTCTATCGCGCGTTGCGCGCGAAGGTTGCGTTCCTCGAACGCGACCGCCCCCTTACGCCGGACTTCCGGG CCGCCGATACGCTGCTACGCGCATATCGCGACTGA
Upstream 100 bases:
>100_bases CGCCGGCCTGGTACGTGATGGTGGCGAGCGCCATCGCGCTCGCATCGATCGCCGCGCTTTCTTCCACGCCACGCCACGCC TGATTTCGGAGAACCGCTCC
Downstream 100 bases:
>100_bases GCGACGCACGGCCCTTCCTTCGTTTCACCCGTTAGAGCAAAGCGGATTGTCCACCCTCCTCGTGTCTCAGCCGATATCGA TCGGTGGACATGATCCGAGA
Product: phenylalanine and histidine ammonia-lyase
Products: NA
Alternate protein names: Histidase [H]
Number of amino acids: Translated: 544; Mature: 544
Protein sequence:
>544_residues MQRFLTRSAIALALFAAVPAFADVTLDGRSVTPESIARIADGEAVSIAPAARQRVVAAHEVLLKAAAAGQQIYGLTVGVG LNKDREMVDAHGKLSQEVIDASTRFNIGLIHAHSGSVGPDMSVRVARAAMAARLNAMLDGGAGVQPAIVDAYAQFLNRGV TPAMPADGSIGEADITILSHVGLAMLGEGDVYYQGRKLAAADALKLAGIATIYPYGKDALAILSSNAYSAGMAALALTDM ARLARVSKLVFALGLQGLNGNVSPFREDTLALRPFPAALRAGAALRTLLAGSSLWNKDPDRPLQDPLSFRSGVYLLGEED RTYDEARALLQVQLNSSDDNPGVAVSVAPKSNRAQDAAGYVDGGGAVLPSANFEPLPWVLAFEQLGLALGHNALASAQRI VKLNDSHLSGLSRFLGTEETVHAFGAMEKPPTALAMTIKTLATPVSLDYLPVAGGIEDIATNAPEVVQRVQKQIDASYTL LGLELIEAAQAIDLRRRRQPSFTLAPATQPLYRALRAKVAFLERDRPLTPDFRAADTLLRAYRD
Sequences:
>Translated_544_residues MQRFLTRSAIALALFAAVPAFADVTLDGRSVTPESIARIADGEAVSIAPAARQRVVAAHEVLLKAAAAGQQIYGLTVGVG LNKDREMVDAHGKLSQEVIDASTRFNIGLIHAHSGSVGPDMSVRVARAAMAARLNAMLDGGAGVQPAIVDAYAQFLNRGV TPAMPADGSIGEADITILSHVGLAMLGEGDVYYQGRKLAAADALKLAGIATIYPYGKDALAILSSNAYSAGMAALALTDM ARLARVSKLVFALGLQGLNGNVSPFREDTLALRPFPAALRAGAALRTLLAGSSLWNKDPDRPLQDPLSFRSGVYLLGEED RTYDEARALLQVQLNSSDDNPGVAVSVAPKSNRAQDAAGYVDGGGAVLPSANFEPLPWVLAFEQLGLALGHNALASAQRI VKLNDSHLSGLSRFLGTEETVHAFGAMEKPPTALAMTIKTLATPVSLDYLPVAGGIEDIATNAPEVVQRVQKQIDASYTL LGLELIEAAQAIDLRRRRQPSFTLAPATQPLYRALRAKVAFLERDRPLTPDFRAADTLLRAYRD >Mature_544_residues MQRFLTRSAIALALFAAVPAFADVTLDGRSVTPESIARIADGEAVSIAPAARQRVVAAHEVLLKAAAAGQQIYGLTVGVG LNKDREMVDAHGKLSQEVIDASTRFNIGLIHAHSGSVGPDMSVRVARAAMAARLNAMLDGGAGVQPAIVDAYAQFLNRGV TPAMPADGSIGEADITILSHVGLAMLGEGDVYYQGRKLAAADALKLAGIATIYPYGKDALAILSSNAYSAGMAALALTDM ARLARVSKLVFALGLQGLNGNVSPFREDTLALRPFPAALRAGAALRTLLAGSSLWNKDPDRPLQDPLSFRSGVYLLGEED RTYDEARALLQVQLNSSDDNPGVAVSVAPKSNRAQDAAGYVDGGGAVLPSANFEPLPWVLAFEQLGLALGHNALASAQRI VKLNDSHLSGLSRFLGTEETVHAFGAMEKPPTALAMTIKTLATPVSLDYLPVAGGIEDIATNAPEVVQRVQKQIDASYTL LGLELIEAAQAIDLRRRRQPSFTLAPATQPLYRALRAKVAFLERDRPLTPDFRAADTLLRAYRD
Specific function: Unknown
COG id: COG2986
COG function: function code E; Histidine ammonia-lyase
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the PAL/histidase family [H]
Homologues:
Organism=Homo sapiens, GI4504333, Length=530, Percent_Identity=25.8490566037736, Blast_Score=144, Evalue=3e-34, Organism=Caenorhabditis elegans, GI17567831, Length=548, Percent_Identity=23.3576642335766, Blast_Score=105, Evalue=5e-23,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005921 - InterPro: IPR008948 - InterPro: IPR001106 - InterPro: IPR022313 [H]
Pfam domain/function: PF00221 PAL [H]
EC number: =4.3.1.3 [H]
Molecular weight: Translated: 57484; Mature: 57484
Theoretical pI: Translated: 6.74; Mature: 6.74
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQRFLTRSAIALALFAAVPAFADVTLDGRSVTPESIARIADGEAVSIAPAARQRVVAAHE CCHHHHHHHHHHHHHHHHHHHHEEEECCCCCCHHHHHHHCCCCEEEECHHHHHHHHHHHH VLLKAAAAGQQIYGLTVGVGLNKDREMVDAHGKLSQEVIDASTRFNIGLIHAHSGSVGPD HHHHHHHCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCC MSVRVARAAMAARLNAMLDGGAGVQPAIVDAYAQFLNRGVTPAMPADGSIGEADITILSH CHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHH VGLAMLGEGDVYYQGRKLAAADALKLAGIATIYPYGKDALAILSSNAYSAGMAALALTDM CCEEEECCCCEEECCCEEHHHHHHHHCCEEEECCCCCCCEEEEECCCCHHHHHHHHHHHH ARLARVSKLVFALGLQGLNGNVSPFREDTLALRPFPAALRAGAALRTLLAGSSLWNKDPD HHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEECCCHHHHHHHHHHHHHHHCCHHCCCCCC RPLQDPLSFRSGVYLLGEEDRTYDEARALLQVQLNSSDDNPGVAVSVAPKSNRAQDAAGY CCCCCHHHHCCCEEEECCCCCCHHHHHEEEEEEECCCCCCCCEEEEECCCCCCCCCCCCE VDGGGAVLPSANFEPLPWVLAFEQLGLALGHNALASAQRIVKLNDSHLSGLSRFLGTEET ECCCCEECCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHEECCHHHHHHHHHHCCHHH VHAFGAMEKPPTALAMTIKTLATPVSLDYLPVAGGIEDIATNAPEVVQRVQKQIDASYTL HHHHCCCCCCCHHHHHHHHHHHCCCCCCCEECCCCHHHHHCCCHHHHHHHHHHHCCCHHH LGLELIEAAQAIDLRRRRQPSFTLAPATQPLYRALRAKVAFLERDRPLTPDFRAADTLLR HHHHHHHHHHHHHHHHHCCCCEEECCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHH AYRD HHCC >Mature Secondary Structure MQRFLTRSAIALALFAAVPAFADVTLDGRSVTPESIARIADGEAVSIAPAARQRVVAAHE CCHHHHHHHHHHHHHHHHHHHHEEEECCCCCCHHHHHHHCCCCEEEECHHHHHHHHHHHH VLLKAAAAGQQIYGLTVGVGLNKDREMVDAHGKLSQEVIDASTRFNIGLIHAHSGSVGPD HHHHHHHCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCC MSVRVARAAMAARLNAMLDGGAGVQPAIVDAYAQFLNRGVTPAMPADGSIGEADITILSH CHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHH VGLAMLGEGDVYYQGRKLAAADALKLAGIATIYPYGKDALAILSSNAYSAGMAALALTDM CCEEEECCCCEEECCCEEHHHHHHHHCCEEEECCCCCCCEEEEECCCCHHHHHHHHHHHH ARLARVSKLVFALGLQGLNGNVSPFREDTLALRPFPAALRAGAALRTLLAGSSLWNKDPD HHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEECCCHHHHHHHHHHHHHHHCCHHCCCCCC RPLQDPLSFRSGVYLLGEEDRTYDEARALLQVQLNSSDDNPGVAVSVAPKSNRAQDAAGY CCCCCHHHHCCCEEEECCCCCCHHHHHEEEEEEECCCCCCCCEEEEECCCCCCCCCCCCE VDGGGAVLPSANFEPLPWVLAFEQLGLALGHNALASAQRIVKLNDSHLSGLSRFLGTEET ECCCCEECCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHEECCHHHHHHHHHHCCHHH VHAFGAMEKPPTALAMTIKTLATPVSLDYLPVAGGIEDIATNAPEVVQRVQKQIDASYTL HHHHCCCCCCCHHHHHHHHHHHCCCCCCCEECCCCHHHHHCCCHHHHHHHHHHHCCCHHH LGLELIEAAQAIDLRRRRQPSFTLAPATQPLYRALRAKVAFLERDRPLTPDFRAADTLLR HHHHHHHHHHHHHHHHHCCCCEEECCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHH AYRD HHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA