| Definition | Burkholderia pseudomallei MSHR346 chromosome I, complete genome. |
|---|---|
| Accession | NC_012695 |
| Length | 4,098,576 |
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The map label for this gene is 237812346
Identifier: 237812346
GI number: 237812346
Start: 2058011
End: 2059102
Strand: Direct
Name: 237812346
Synonym: GBP346_A2094
Alternate gene names: NA
Gene position: 2058011-2059102 (Clockwise)
Preceding gene: 237812345
Following gene: 237812347
Centisome position: 50.21
GC content: 68.22
Gene sequence:
>1092_bases ATGGGACGCATCCTGTCTTCGAAGGACGTTGAAGCCGCCGTCAAGGGCGGCTCGGTTTTCGCATGCGGCGGCGGCGGCTG GGCCGACCACGGCCGCGAACTCGGCATGCTCGCGGTCACGATCGGCCGCCCCGAACTGGTCGCCATCGACGAATTGCCGG ACGACGCATGGATCGCCACGGCCGCCGCAATCGGCGCGCCGGGCGGCCTCACCGACTGGCAAATGCTCGGCGCCGACTAC GTGAAGGCCGCTCAGCTCGTGCAGGAAGCGCTCGGCGCACCGCTCGCGGGACTCATCATCGGGCAGAACGGCATGTCGAG CACGCTTAACGCGTGGCTGCCGTCCGCGCTGCTCGGCGCCAAGGTCGTCGACGCGGTCGCCGATCTGCGCGCCCATCCGA CCGGCGACATGGGCTCGCTCGGTCTCGCGTCGAGCTCCGAACCGATGATCCAGGCAGCCGCCGGAGGCAACCGCGCGAAG CATGCGTACATGGAAGTCGTCGTGCGCGGCGCGACCGCCAAGGTATCGCCGGTATTGCGCAAGGCCGCCGACATGGCCGG CGGCTTCATCGCGAGCTGCCGCAACCCCATCCGCGCATCGTACGTGCGCCGGCATGCGGCGCTCGGCGGCATCAGTCGCG CGCTCGCGCTCGGCGAAGCAATCATCGACGCCGAGCGGCGCGGCGGCAGCGCGGTGATCGATGCGATCTGCGCAGCCACG CAAGGCGAGATCATCGTGAGCGGCAAAGTCGAGCGCAATACGCTCGCCTACACGCGCGAGGCGTTCGACGTCGGACTCGT CTATCTCGGCGAGGGCGCCAAGCGCGCGGTCATTCATGTGATGAACGAACACATGGCGGTAGACGACGCGCACGGCGAGC GGATCGCGACCTACCCCGACGTGATCACGACGCTCGACAGCGACGGCCGCCCTGTCAGCGCCGGGCAGTTAAAGGAAGGG ATGGAGATTCACGTGCTGCGGGTGACGAAGACACACATTCCGCTGTCGTCGTCGGTGTTCGATCCCGCGATCTACCCGCC GGTCGAAACCGCGCTCGGCATCTCGATCGCCGACTATGCGCTCGCCCGCTGA
Upstream 100 bases:
>100_bases CTCAATATTCGGTGTCCATAGAATCGTTTGGACAGTACCGCCATACAAGGTTTTCCGCCCGGCGCGTACAGCCCTTTCCT CCTATCAGGACAAACGACAC
Downstream 100 bases:
>100_bases ACGCAAAGGCACGGCACGATGAACCGCACCTTCGAAGTCACGTCCGGCGATACGCTGCGCTGCAAAGGCTGGCGCCAGGA GGCGCTGCTGCGTCTTCTGG
Product: OsrF
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 363; Mature: 362
Protein sequence:
>363_residues MGRILSSKDVEAAVKGGSVFACGGGGWADHGRELGMLAVTIGRPELVAIDELPDDAWIATAAAIGAPGGLTDWQMLGADY VKAAQLVQEALGAPLAGLIIGQNGMSSTLNAWLPSALLGAKVVDAVADLRAHPTGDMGSLGLASSSEPMIQAAAGGNRAK HAYMEVVVRGATAKVSPVLRKAADMAGGFIASCRNPIRASYVRRHAALGGISRALALGEAIIDAERRGGSAVIDAICAAT QGEIIVSGKVERNTLAYTREAFDVGLVYLGEGAKRAVIHVMNEHMAVDDAHGERIATYPDVITTLDSDGRPVSAGQLKEG MEIHVLRVTKTHIPLSSSVFDPAIYPPVETALGISIADYALAR
Sequences:
>Translated_363_residues MGRILSSKDVEAAVKGGSVFACGGGGWADHGRELGMLAVTIGRPELVAIDELPDDAWIATAAAIGAPGGLTDWQMLGADY VKAAQLVQEALGAPLAGLIIGQNGMSSTLNAWLPSALLGAKVVDAVADLRAHPTGDMGSLGLASSSEPMIQAAAGGNRAK HAYMEVVVRGATAKVSPVLRKAADMAGGFIASCRNPIRASYVRRHAALGGISRALALGEAIIDAERRGGSAVIDAICAAT QGEIIVSGKVERNTLAYTREAFDVGLVYLGEGAKRAVIHVMNEHMAVDDAHGERIATYPDVITTLDSDGRPVSAGQLKEG MEIHVLRVTKTHIPLSSSVFDPAIYPPVETALGISIADYALAR >Mature_362_residues GRILSSKDVEAAVKGGSVFACGGGGWADHGRELGMLAVTIGRPELVAIDELPDDAWIATAAAIGAPGGLTDWQMLGADYV KAAQLVQEALGAPLAGLIIGQNGMSSTLNAWLPSALLGAKVVDAVADLRAHPTGDMGSLGLASSSEPMIQAAAGGNRAKH AYMEVVVRGATAKVSPVLRKAADMAGGFIASCRNPIRASYVRRHAALGGISRALALGEAIIDAERRGGSAVIDAICAATQ GEIIVSGKVERNTLAYTREAFDVGLVYLGEGAKRAVIHVMNEHMAVDDAHGERIATYPDVITTLDSDGRPVSAGQLKEGM EIHVLRVTKTHIPLSSSVFDPAIYPPVETALGISIADYALAR
Specific function: Unknown
COG id: COG3535
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37517; Mature: 37386
Theoretical pI: Translated: 6.05; Mature: 6.05
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGRILSSKDVEAAVKGGSVFACGGGGWADHGRELGMLAVTIGRPELVAIDELPDDAWIAT CCCCCCCCCCHHHCCCCCEEEECCCCCCCCCCCCCEEEEEECCCCEEEEECCCCCHHHHH AAAIGAPGGLTDWQMLGADYVKAAQLVQEALGAPLAGLIIGQNGMSSTLNAWLPSALLGA HHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCHHHHHHHHHHHHHH KVVDAVADLRAHPTGDMGSLGLASSSEPMIQAAAGGNRAKHAYMEVVVRGATAKVSPVLR HHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHCCCCCHHHHHHH KAADMAGGFIASCRNPIRASYVRRHAALGGISRALALGEAIIDAERRGGSAVIDAICAAT HHHHHCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCC QGEIIVSGKVERNTLAYTREAFDVGLVYLGEGAKRAVIHVMNEHMAVDDAHGERIATYPD CCCEEEECCCCCCHHHHHHHHHHEEEEEECCCCHHHHHHHHHHHCEEECCCCCEEECCCH VITTLDSDGRPVSAGQLKEGMEIHVLRVTKTHIPLSSSVFDPAIYPPVETALGISIADYA HHHCCCCCCCCCCHHHHCCCCEEEEEEEEEECCCCCCCCCCCCCCCCHHHHHCCCHHHHH LAR HCC >Mature Secondary Structure GRILSSKDVEAAVKGGSVFACGGGGWADHGRELGMLAVTIGRPELVAIDELPDDAWIAT CCCCCCCCCHHHCCCCCEEEECCCCCCCCCCCCCEEEEEECCCCEEEEECCCCCHHHHH AAAIGAPGGLTDWQMLGADYVKAAQLVQEALGAPLAGLIIGQNGMSSTLNAWLPSALLGA HHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCHHHHHHHHHHHHHH KVVDAVADLRAHPTGDMGSLGLASSSEPMIQAAAGGNRAKHAYMEVVVRGATAKVSPVLR HHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHCCCCCHHHHHHH KAADMAGGFIASCRNPIRASYVRRHAALGGISRALALGEAIIDAERRGGSAVIDAICAAT HHHHHCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCC QGEIIVSGKVERNTLAYTREAFDVGLVYLGEGAKRAVIHVMNEHMAVDDAHGERIATYPD CCCEEEECCCCCCHHHHHHHHHHEEEEEECCCCHHHHHHHHHHHCEEECCCCCEEECCCH VITTLDSDGRPVSAGQLKEGMEIHVLRVTKTHIPLSSSVFDPAIYPPVETALGISIADYA HHHCCCCCCCCCCHHHHCCCCEEEEEEEEEECCCCCCCCCCCCCCCCHHHHHCCCHHHHH LAR HCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA